FFCP PHASE1:Hg19::chr1:200008407..200008418,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7984|TSSclassifier=S|UniProt=|association_with_transcript=-239bp_to_uc009wzh.2_5end|description=CAGE_peak_7_at_NR5A2_5end|id=chr1:200008407..200008418,+|ontology_enrichment_celltype=CL:0002322!1.78e-10!5|ontology_enrichment_celltype_v019=CL:0000039;6.37e-31;7!CL:0000586;6.37e-31;7!CL:0000182;1.82e-10;12!CL:0002262;6.80e-08;2!CL:1000398;6.80e-08;2|ontology_enrichment_celltype_v019_2=CL:0000039,9.01e-31,7;CL:0000586,9.01e-31,7;CL:0000182,1.57e-10,12;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2|ontology_enrichment_development_v019=UBERON:0009117;9.03e-22;10!UBERON:0005564;9.03e-22;10!UBERON:0003099;1.72e-14;1!UBERON:0003852;1.72e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;4.66e-10;22!DOID:2994;4.66e-10;22|ontology_enrichment_disease_v019_2=DOID:3095,5.19e-10,22;DOID:2994,5.19e-10,22|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;4.11e-27;8!UBERON:0003135;7.96e-20;11!UBERON:0005705;1.72e-14;1!UBERON:0008193;1.72e-14;1!UBERON:0010912;1.72e-14;1!UBERON:0002514;1.72e-14;1!UBERON:0003457;1.72e-14;1!UBERON:0008907;1.72e-14;1!UBERON:0008001;1.72e-14;1!UBERON:0007213;1.72e-14;1!UBERON:0009891;1.72e-14;1!UBERON:0007914;1.72e-14;1!UBERON:0007375;1.72e-14;1!UBERON:0003323;1.72e-14;1!UBERON:0010258;1.72e-14;1!UBERON:0005253;1.72e-14;1!UBERON:0007842;1.72e-14;1!UBERON:0002397;1.72e-14;1!UBERON:0003113;1.72e-14;1!UBERON:0003277;1.72e-14;1!UBERON:0001709;1.72e-14;1!UBERON:0002244;1.72e-14;1!UBERON:0005620;1.72e-14;1!UBERON:0010364;1.72e-14;1!UBERON:0004288;1.72e-14;1!UBERON:0002107;2.37e-11;19!UBERON:0006925;2.37e-11;19!UBERON:0000991;1.59e-10;21!UBERON:0003101;4.66e-10;22!UBERON:0000079;4.66e-10;22!UBERON:0002423;1.10e-08;25!UBERON:0001281;6.80e-08;2!UBERON:0003497;6.80e-08;2!UBERON:0003909;6.80e-08;2!UBERON:0003835;6.80e-08;2!UBERON:0004089;6.80e-08;2!UBERON:0000922;4.58e-07;49!UBERON:0002365;5.42e-07;31!UBERON:0002330;5.42e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.57e-27,8;UBERON:0003135,9.91e-20,11;UBERON:0005705,1.61e-14,1;UBERON:0008193,1.61e-14,1;UBERON:0010912,1.61e-14,1;UBERON:0002514,1.61e-14,1;UBERON:0003457,1.61e-14,1;UBERON:0008907,1.61e-14,1;UBERON:0008001,1.61e-14,1;UBERON:0007213,1.61e-14,1;UBERON:0009891,1.61e-14,1;UBERON:0007914,1.61e-14,1;UBERON:0009292,1.61e-14,1;UBERON:0003099,1.61e-14,1;UBERON:0007375,1.61e-14,1;UBERON:0003323,1.61e-14,1;UBERON:0010258,1.61e-14,1;UBERON:0007842,1.61e-14,1;UBERON:0009494,1.61e-14,1;UBERON:0010042,1.61e-14,1;UBERON:0010045,1.61e-14,1;UBERON:0010259,1.61e-14,1;UBERON:0010359,1.61e-14,1;UBERON:0009526,1.61e-14,1;UBERON:0002397,1.61e-14,1;UBERON:0003113,1.61e-14,1;UBERON:0003277,1.61e-14,1;UBERON:0001709,1.61e-14,1;UBERON:0004066,1.61e-14,1;UBERON:0002244,1.61e-14,1;UBERON:0005620,1.61e-14,1;UBERON:0004362,1.61e-14,1;UBERON:0010364,1.61e-14,1;UBERON:0010046,1.61e-14,1;UBERON:0005868,1.61e-14,1;UBERON:0007238,1.61e-14,1;UBERON:0004288,1.61e-14,1;UBERON:0004068,1.61e-14,1;UBERON:0010334,1.61e-14,1;UBERON:0003852,1.61e-14,1;UBERON:0010253,1.61e-14,1;UBERON:0002107,2.13e-11,19;UBERON:0006925,2.13e-11,19;UBERON:0008836,2.13e-11,19;UBERON:0000991,1.78e-10,21;UBERON:0009196,1.78e-10,21;UBERON:0009117,1.78e-10,21;UBERON:0005564,1.78e-10,21;UBERON:0004176,5.19e-10,22;UBERON:0003101,5.19e-10,22;UBERON:0000079,5.19e-10,22;UBERON:0008835,7.05e-10,22;UBERON:0003894,7.05e-10,22;UBERON:0009854,1.85e-09,23;UBERON:0007499,1.01e-08,25;UBERON:0009497,1.01e-08,25;UBERON:0000015,1.01e-08,25;UBERON:0002423,1.01e-08,25;UBERON:0006235,1.01e-08,25;UBERON:0004161,1.01e-08,25;UBERON:0009856,2.15e-08,26;UBERON:0001281,5.74e-08,2;UBERON:0003497,5.74e-08,2;UBERON:0003909,5.74e-08,2;UBERON:0003835,5.74e-08,2;UBERON:0005253,6.58e-08,2;UBERON:0004089,6.58e-08,2;UBERON:0002365,4.52e-07,31;UBERON:0002330,4.52e-07,31;UBERON:0004458,8.19e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0,0,0.267899184852239,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,1.96565443335525,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,1.443313420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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7984 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-239bp_to_uc009wzh.2_5end | |||
|description=CAGE_peak_7_at_NR5A2_5end | |||
|id=chr1:200008407..200008418,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.78e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.37e-31;7!CL:0000586;6.37e-31;7!CL:0000182;1.82e-10;12!CL:0002262;6.80e-08;2!CL:1000398;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.01e-31,7;CL:0000586,9.01e-31,7;CL:0000182,1.57e-10,12;CL:0002262,5.74e-08,2;CL:1000398,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.03e-22;10!UBERON:0005564;9.03e-22;10!UBERON:0003099;1.72e-14;1!UBERON:0003852;1.72e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.66e-10;22!DOID:2994;4.66e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.19e-10,22;DOID:2994,5.19e-10,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.11e-27;8!UBERON:0003135;7.96e-20;11!UBERON:0005705;1.72e-14;1!UBERON:0008193;1.72e-14;1!UBERON:0010912;1.72e-14;1!UBERON:0002514;1.72e-14;1!UBERON:0003457;1.72e-14;1!UBERON:0008907;1.72e-14;1!UBERON:0008001;1.72e-14;1!UBERON:0007213;1.72e-14;1!UBERON:0009891;1.72e-14;1!UBERON:0007914;1.72e-14;1!UBERON:0007375;1.72e-14;1!UBERON:0003323;1.72e-14;1!UBERON:0010258;1.72e-14;1!UBERON:0005253;1.72e-14;1!UBERON:0007842;1.72e-14;1!UBERON:0002397;1.72e-14;1!UBERON:0003113;1.72e-14;1!UBERON:0003277;1.72e-14;1!UBERON:0001709;1.72e-14;1!UBERON:0002244;1.72e-14;1!UBERON:0005620;1.72e-14;1!UBERON:0010364;1.72e-14;1!UBERON:0004288;1.72e-14;1!UBERON:0002107;2.37e-11;19!UBERON:0006925;2.37e-11;19!UBERON:0000991;1.59e-10;21!UBERON:0003101;4.66e-10;22!UBERON:0000079;4.66e-10;22!UBERON:0002423;1.10e-08;25!UBERON:0001281;6.80e-08;2!UBERON:0003497;6.80e-08;2!UBERON:0003909;6.80e-08;2!UBERON:0003835;6.80e-08;2!UBERON:0004089;6.80e-08;2!UBERON:0000922;4.58e-07;49!UBERON:0002365;5.42e-07;31!UBERON:0002330;5.42e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.57e-27,8;UBERON:0003135,9.91e-20,11;UBERON:0005705,1.61e-14,1;UBERON:0008193,1.61e-14,1;UBERON:0010912,1.61e-14,1;UBERON:0002514,1.61e-14,1;UBERON:0003457,1.61e-14,1;UBERON:0008907,1.61e-14,1;UBERON:0008001,1.61e-14,1;UBERON:0007213,1.61e-14,1;UBERON:0009891,1.61e-14,1;UBERON:0007914,1.61e-14,1;UBERON:0009292,1.61e-14,1;UBERON:0003099,1.61e-14,1;UBERON:0007375,1.61e-14,1;UBERON:0003323,1.61e-14,1;UBERON:0010258,1.61e-14,1;UBERON:0007842,1.61e-14,1;UBERON:0009494,1.61e-14,1;UBERON:0010042,1.61e-14,1;UBERON:0010045,1.61e-14,1;UBERON:0010259,1.61e-14,1;UBERON:0010359,1.61e-14,1;UBERON:0009526,1.61e-14,1;UBERON:0002397,1.61e-14,1;UBERON:0003113,1.61e-14,1;UBERON:0003277,1.61e-14,1;UBERON:0001709,1.61e-14,1;UBERON:0004066,1.61e-14,1;UBERON:0002244,1.61e-14,1;UBERON:0005620,1.61e-14,1;UBERON:0004362,1.61e-14,1;UBERON:0010364,1.61e-14,1;UBERON:0010046,1.61e-14,1;UBERON:0005868,1.61e-14,1;UBERON:0007238,1.61e-14,1;UBERON:0004288,1.61e-14,1;UBERON:0004068,1.61e-14,1;UBERON:0010334,1.61e-14,1;UBERON:0003852,1.61e-14,1;UBERON:0010253,1.61e-14,1;UBERON:0002107,2.13e-11,19;UBERON:0006925,2.13e-11,19;UBERON:0008836,2.13e-11,19;UBERON:0000991,1.78e-10,21;UBERON:0009196,1.78e-10,21;UBERON:0009117,1.78e-10,21;UBERON:0005564,1.78e-10,21;UBERON:0004176,5.19e-10,22;UBERON:0003101,5.19e-10,22;UBERON:0000079,5.19e-10,22;UBERON:0008835,7.05e-10,22;UBERON:0003894,7.05e-10,22;UBERON:0009854,1.85e-09,23;UBERON:0007499,1.01e-08,25;UBERON:0009497,1.01e-08,25;UBERON:0000015,1.01e-08,25;UBERON:0002423,1.01e-08,25;UBERON:0006235,1.01e-08,25;UBERON:0004161,1.01e-08,25;UBERON:0009856,2.15e-08,26;UBERON:0001281,5.74e-08,2;UBERON:0003497,5.74e-08,2;UBERON:0003909,5.74e-08,2;UBERON:0003835,5.74e-08,2;UBERON:0005253,6.58e-08,2;UBERON:0004089,6.58e-08,2;UBERON:0002365,4.52e-07,31;UBERON:0002330,4.52e-07,31;UBERON:0004458,8.19e-07,49 | |||
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|short_description=p7@NR5A2 | |||
}} |
Revision as of 02:40, 12 September 2013
Short description: | p7@NR5A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_NR5A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -239bp_to_uc009wzh.2_5end |
EntrezGene: | NR5A2 |
HGNC: | 7984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.01e-31 | 7 |
germ cell | 9.01e-31 | 7 |
hepatocyte | 1.57e-10 | 12 |
endothelial cell of sinusoid | 5.74e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.19e-10 | 22 |
germ cell cancer | 5.19e-10 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.