FFCP PHASE1:Hg19::chr1:182991320..182991324,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:182991320..182991324,+|id=chr1:182991320..182991324,+|ontology_enrichment_celltype=CL:0000066!1.94e-18!254;CL:0002076!6.45e-10!43;CL:0000223!8.21e-10!59;CL:0002202!3.59e-09!9;CL:0002632!3.59e-09!9;CL:0002368!2.74e-07!13;CL:0000076!8.79e-07!62|ontology_enrichment_celltype_v019=CL:0002202;7.68e-28;9!CL:0002632;7.68e-28;9!CL:0002368;9.78e-26;13!CL:0000307;1.16e-21;3!CL:0002328;9.59e-11;3!CL:1001319;1.36e-08;1!CL:1000600;1.36e-08;1!CL:0002327;5.63e-08;4!CL:0002076;5.93e-08;42|ontology_enrichment_celltype_v019_2=CL:0002202,7.57e-28,9;CL:0002632,7.57e-28,9;CL:0002368,1.43e-25,13;CL:0000068,1.09e-21,3;CL:0000069,1.09e-21,3;CL:0000307,1.09e-21,3;CL:0000377,1.09e-21,3;CL:0002076,3.60e-12,42;CL:0002328,9.62e-11,3;CL:0000223,1.94e-10,58;CL:0000066,2.89e-10,253;CL:1001319,1.52e-08,1;CL:1000600,1.52e-08,1;CL:0002327,4.12e-08,4|ontology_enrichment_development_v019=CL:0000377;1.16e-21;3|ontology_enrichment_disease=DOID:14566!1.48e-26!239;DOID:162!4.16e-26!235;DOID:0050687!5.23e-22!143;DOID:305!2.22e-20!106;DOID:1749!1.88e-10!14;DOID:0050686!3.77e-09!137;DOID:299!9.85e-09!25;DOID:170!4.68e-07!6|ontology_enrichment_disease_v019=DOID:1749;4.06e-08;14|ontology_enrichment_disease_v019_2=DOID:1749,3.70e-08,14;DOID:305,2.97e-07,106|ontology_enrichment_uberon=UBERON:0000464!5.15e-08!104|ontology_enrichment_uberon_v019=UBERON:0007196;1.61e-16;15!UBERON:0001558;1.61e-16;15!UBERON:0004815;9.59e-11;3!UBERON:0002031;9.59e-11;3!UBERON:0003126;1.36e-09;7!UBERON:0001005;1.36e-09;7!UBERON:0005178;3.87e-09;34!UBERON:0002224;3.87e-09;34!UBERON:0004645;1.36e-08;1!UBERON:0001256;1.36e-08;1!UBERON:0001259;1.36e-08;1!UBERON:0004913;3.44e-08;1!UBERON:0003703;3.44e-08;1!UBERON:0001174;3.44e-08;1!UBERON:0004914;3.44e-08;1!UBERON:0000065;4.72e-08;44!UBERON:0001911;5.63e-08;4!UBERON:0005181;1.05e-07;35!UBERON:0000072;1.61e-07;37!UBERON:0002185;9.06e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.59e-16,15;UBERON:0001558,1.59e-16,15;UBERON:0004815,9.62e-11,3;UBERON:0002031,9.62e-11,3;UBERON:0003126,1.32e-09,7;UBERON:0001005,1.32e-09,7;UBERON:0005178,2.14e-09,34;UBERON:0002224,2.14e-09,34;UBERON:0000065,3.85e-09,54;UBERON:0005181,4.19e-09,35;UBERON:0005153,1.33e-08,37;UBERON:0000072,1.51e-08,47;UBERON:0004645,1.52e-08,1;UBERON:0001256,1.52e-08,1;UBERON:0001259,1.52e-08,1;UBERON:0008947,2.56e-08,38;UBERON:0003258,2.56e-08,38;UBERON:0001911,4.12e-08,4;UBERON:0005333,4.12e-08,4;UBERON:0008425,4.12e-08,4;UBERON:0005311,4.12e-08,4;UBERON:0004913,6.68e-08,1;UBERON:0003703,6.68e-08,1;UBERON:0001174,6.68e-08,1;UBERON:0004914,6.68e-08,1;UBERON:0002185,9.07e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,3.67768489791571,0.6024118375565,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.100528972411631,0.462942225792648,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,1.79117045405697,2.61570544662566,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53955380360819,1.34060455107157,5.44454924306613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,1.42068073403207,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.898683511473268,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:182991320..182991324,+ | |||
|id=chr1:182991320..182991324,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-18!254;CL:0002076!6.45e-10!43;CL:0000223!8.21e-10!59;CL:0002202!3.59e-09!9;CL:0002632!3.59e-09!9;CL:0002368!2.74e-07!13;CL:0000076!8.79e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002202;7.68e-28;9!CL:0002632;7.68e-28;9!CL:0002368;9.78e-26;13!CL:0000307;1.16e-21;3!CL:0002328;9.59e-11;3!CL:1001319;1.36e-08;1!CL:1000600;1.36e-08;1!CL:0002327;5.63e-08;4!CL:0002076;5.93e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,7.57e-28,9;CL:0002632,7.57e-28,9;CL:0002368,1.43e-25,13;CL:0000068,1.09e-21,3;CL:0000069,1.09e-21,3;CL:0000307,1.09e-21,3;CL:0000377,1.09e-21,3;CL:0002076,3.60e-12,42;CL:0002328,9.62e-11,3;CL:0000223,1.94e-10,58;CL:0000066,2.89e-10,253;CL:1001319,1.52e-08,1;CL:1000600,1.52e-08,1;CL:0002327,4.12e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.16e-21;3 | |||
|ontology_enrichment_disease=DOID:14566!1.48e-26!239;DOID:162!4.16e-26!235;DOID:0050687!5.23e-22!143;DOID:305!2.22e-20!106;DOID:1749!1.88e-10!14;DOID:0050686!3.77e-09!137;DOID:299!9.85e-09!25;DOID:170!4.68e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.70e-08,14;DOID:305,2.97e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000464!5.15e-08!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.61e-16;15!UBERON:0001558;1.61e-16;15!UBERON:0004815;9.59e-11;3!UBERON:0002031;9.59e-11;3!UBERON:0003126;1.36e-09;7!UBERON:0001005;1.36e-09;7!UBERON:0005178;3.87e-09;34!UBERON:0002224;3.87e-09;34!UBERON:0004645;1.36e-08;1!UBERON:0001256;1.36e-08;1!UBERON:0001259;1.36e-08;1!UBERON:0004913;3.44e-08;1!UBERON:0003703;3.44e-08;1!UBERON:0001174;3.44e-08;1!UBERON:0004914;3.44e-08;1!UBERON:0000065;4.72e-08;44!UBERON:0001911;5.63e-08;4!UBERON:0005181;1.05e-07;35!UBERON:0000072;1.61e-07;37!UBERON:0002185;9.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.59e-16,15;UBERON:0001558,1.59e-16,15;UBERON:0004815,9.62e-11,3;UBERON:0002031,9.62e-11,3;UBERON:0003126,1.32e-09,7;UBERON:0001005,1.32e-09,7;UBERON:0005178,2.14e-09,34;UBERON:0002224,2.14e-09,34;UBERON:0000065,3.85e-09,54;UBERON:0005181,4.19e-09,35;UBERON:0005153,1.33e-08,37;UBERON:0000072,1.51e-08,47;UBERON:0004645,1.52e-08,1;UBERON:0001256,1.52e-08,1;UBERON:0001259,1.52e-08,1;UBERON:0008947,2.56e-08,38;UBERON:0003258,2.56e-08,38;UBERON:0001911,4.12e-08,4;UBERON:0005333,4.12e-08,4;UBERON:0008425,4.12e-08,4;UBERON:0005311,4.12e-08,4;UBERON:0004913,6.68e-08,1;UBERON:0003703,6.68e-08,1;UBERON:0001174,6.68e-08,1;UBERON:0004914,6.68e-08,1;UBERON:0002185,9.07e-07,5 | |||
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|short_description=p@chr1:182991320..182991324,+ | |||
}} |
Revision as of 02:09, 12 September 2013
Short description: | p@chr1:182991320..182991324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:182991320..182991324, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 7.57e-28 | 9 |
epithelial cell of lower respiratory tract | 7.57e-28 | 9 |
respiratory epithelial cell | 1.43e-25 | 13 |
duct epithelial cell | 1.09e-21 | 3 |
branched duct epithelial cell | 1.09e-21 | 3 |
tracheal epithelial cell | 1.09e-21 | 3 |
tracheoblast | 1.09e-21 | 3 |
endo-epithelial cell | 3.60e-12 | 42 |
bronchial epithelial cell | 9.62e-11 | 3 |
endodermal cell | 1.94e-10 | 58 |
epithelial cell | 2.89e-10 | 253 |
bladder cell | 1.52e-08 | 1 |
lower urinary tract cell | 1.52e-08 | 1 |
mammary gland epithelial cell | 4.12e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.59e-16 | 15 |
lower respiratory tract | 1.59e-16 | 15 |
lower respiratory tract epithelium | 9.62e-11 | 3 |
epithelium of bronchus | 9.62e-11 | 3 |
trachea | 1.32e-09 | 7 |
respiratory airway | 1.32e-09 | 7 |
thoracic cavity element | 2.14e-09 | 34 |
thoracic cavity | 2.14e-09 | 34 |
respiratory tract | 3.85e-09 | 54 |
thoracic segment organ | 4.19e-09 | 35 |
epithelial bud | 1.33e-08 | 37 |
segment of respiratory tract | 1.51e-08 | 47 |
urinary bladder urothelium | 1.52e-08 | 1 |
wall of urinary bladder | 1.52e-08 | 1 |
mucosa of urinary bladder | 1.52e-08 | 1 |
respiratory primordium | 2.56e-08 | 38 |
endoderm of foregut | 2.56e-08 | 38 |
mammary gland | 4.12e-08 | 4 |
mammary bud | 4.12e-08 | 4 |
mammary ridge | 4.12e-08 | 4 |
mammary placode | 4.12e-08 | 4 |
hepatopancreatic ampulla | 6.68e-08 | 1 |
extrahepatic bile duct | 6.68e-08 | 1 |
common bile duct | 6.68e-08 | 1 |
duodenal papilla | 6.68e-08 | 1 |
bronchus | 9.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.70e-08 | 14 |
carcinoma | 2.97e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.