FFCP PHASE1:Hg19::chr1:167298233..167298248,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5451|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9212|TSSclassifier=S|UniProt=P14859|association_with_transcript=-32bp_to_ENST00000367862,NM_001198783_5end|coexpression_cluster_id=C10|description=CAGE_peak_6_at_POU2F1_5end|id=chr1:167298233..167298248,+|ontology_enrichment_celltype=CL:0000945!3.58e-30!24;CL:0000826!3.58e-30!24;CL:0000037!4.74e-20!172;CL:0000566!4.74e-20!172;CL:0000738!1.64e-19!140;CL:0002032!5.99e-18!165;CL:0000837!5.99e-18!165;CL:0000988!6.99e-18!182;CL:0000236!4.07e-17!14;CL:0002087!8.39e-16!119;CL:0002031!3.63e-15!124;CL:0000542!7.44e-12!53;CL:0000051!7.44e-12!53;CL:0000838!5.97e-11!52;CL:0000763!9.52e-08!112;CL:0000049!9.52e-08!112;CL:0000766!3.62e-07!76|ontology_enrichment_celltype_v019=CL:0000945;1.96e-30;24!CL:0002619;2.73e-18;3!CL:0000784;2.89e-18;3!CL:0000236;8.85e-15;13!CL:0000047;6.47e-12;2!CL:0000542;2.35e-09;53!CL:0000540;6.10e-09;6!CL:0000404;6.10e-09;6!CL:0000785;3.56e-07;1!CL:0000819;3.56e-07;1!CL:0002087;8.47e-07;104!CL:0000946;8.72e-07;1!CL:0000786;8.72e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,1.53e-30,24;CL:0000826,1.53e-30,24;CL:0002619,1.94e-18,3;CL:0000236,2.15e-18,14;CL:0000784,2.75e-18,3;CL:0000047,2.80e-17,8;CL:0000542,6.51e-15,53;CL:0000051,6.51e-15,53;CL:0000738,1.45e-13,136;CL:0002087,2.69e-13,115;CL:0000838,7.71e-13,52;CL:0000785,2.49e-12,2;CL:0000955,2.49e-12,2;CL:0000818,2.49e-12,2;CL:0000954,2.49e-12,2;CL:0000816,2.49e-12,2;CL:0000037,2.48e-11,168;CL:0002031,4.43e-11,120;CL:0000988,1.59e-10,177;CL:0002032,1.82e-09,161;CL:0000837,1.82e-09,161;CL:0000540,4.52e-09,6;CL:0000031,4.52e-09,6;CL:0000404,4.52e-09,6;CL:0000817,1.66e-08,3;CL:0000819,4.51e-07,1;CL:0000946,6.38e-07,1;CL:0000786,6.38e-07,1;CL:0000980,6.38e-07,1|ontology_enrichment_development_v019=CL:0000954;2.70e-12;2!CL:0000051;2.35e-09;53!CL:0000031;6.10e-09;6!UBERON:0001045;8.72e-07;1|ontology_enrichment_disease=DOID:2531!9.25e-07!51;DOID:0060083!9.25e-07!51|ontology_enrichment_disease_v019=DOID:0060073;3.56e-07;1!DOID:8675;3.56e-07;1!DOID:12603;3.56e-07;1!DOID:630;8.72e-07;1!DOID:0050177;8.72e-07;1!DOID:4960;8.72e-07;1!DOID:0070004;8.72e-07;1!DOID:0050427;8.72e-07;1|ontology_enrichment_disease_v019_2=DOID:12603,4.25e-07,1;DOID:0060073,4.51e-07,1;DOID:8675,4.51e-07,1;DOID:4960,7.15e-07,1;DOID:0070004,7.15e-07,1|ontology_enrichment_uberon=UBERON:0001893!2.74e-20!34;UBERON:0001869!3.92e-20!32;UBERON:0002020!5.19e-20!34;UBERON:0003528!5.19e-20!34;UBERON:0007023!1.66e-19!115;UBERON:0002791!2.00e-19!33;UBERON:0001049!1.00e-17!57;UBERON:0005068!1.00e-17!57;UBERON:0006241!1.00e-17!57;UBERON:0007135!1.00e-17!57;UBERON:0000956!6.38e-17!25;UBERON:0000203!6.38e-17!25;UBERON:0002780!7.56e-17!41;UBERON:0001890!7.56e-17!41;UBERON:0006240!7.56e-17!41;UBERON:0003080!2.88e-16!42;UBERON:0001017!3.03e-16!82;UBERON:0005743!4.67e-16!86;UBERON:0002619!6.47e-16!22;UBERON:0002616!1.53e-15!59;UBERON:0001950!9.60e-14!20;UBERON:0000073!1.87e-13!94;UBERON:0001016!1.87e-13!94;UBERON:0000955!1.40e-12!69;UBERON:0006238!1.40e-12!69;UBERON:0002390!2.04e-10!102;UBERON:0003061!2.04e-10!102;UBERON:0003075!3.35e-10!86;UBERON:0007284!3.35e-10!86;UBERON:0002346!3.42e-10!90;UBERON:0003056!6.41e-10!61;UBERON:0002193!2.40e-09!112|ontology_enrichment_uberon_v019=UBERON:0002106;3.12e-08;3!UBERON:0002372;8.72e-07;1!UBERON:0001154;8.72e-07;1!UBERON:0001153;8.72e-07;1!UBERON:0009854;8.72e-07;1!UBERON:0001961;8.72e-07;1!UBERON:0001744;8.72e-07;1!UBERON:0001042;8.72e-07;1!UBERON:0001735;8.72e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.63e-08,3;UBERON:0004854,3.63e-08,3;UBERON:0009034,3.63e-08,3;UBERON:0002095,3.63e-08,3;UBERON:0004782,3.63e-08,3;UBERON:0003281,3.63e-08,3;UBERON:0009664,3.63e-08,3;UBERON:0002296,3.63e-08,3;UBERON:0005602,3.63e-08,3;UBERON:0001179,3.63e-08,3;UBERON:0006293,3.63e-08,3;UBERON:0002372,9.51e-07,1;UBERON:0001961,9.51e-07,1;UBERON:0001744,9.51e-07,1;UBERON:0001735,9.51e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0,1.60468152070698,0.738905305049512,1.49550484495991,0,0.383829398097213,0.309632246632152,0,0,0,0.92960640696362,0.710846162437108,0.293600439334847,0.553995408531877,0,0,2.91090116511902,2.59114932815184,4.37878464978117,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,1.1384259382189,1.17447437874188,1.14681968437569,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,2.14641561874808,3.43196946468077,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9212 | |||
|TSSclassifier=S | |||
|UniProt=P14859 | |||
|association_with_transcript=-32bp_to_ENST00000367862,NM_001198783_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_POU2F1_5end | |||
|id=chr1:167298233..167298248,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.58e-30!24;CL:0000826!3.58e-30!24;CL:0000037!4.74e-20!172;CL:0000566!4.74e-20!172;CL:0000738!1.64e-19!140;CL:0002032!5.99e-18!165;CL:0000837!5.99e-18!165;CL:0000988!6.99e-18!182;CL:0000236!4.07e-17!14;CL:0002087!8.39e-16!119;CL:0002031!3.63e-15!124;CL:0000542!7.44e-12!53;CL:0000051!7.44e-12!53;CL:0000838!5.97e-11!52;CL:0000763!9.52e-08!112;CL:0000049!9.52e-08!112;CL:0000766!3.62e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.96e-30;24!CL:0002619;2.73e-18;3!CL:0000784;2.89e-18;3!CL:0000236;8.85e-15;13!CL:0000047;6.47e-12;2!CL:0000542;2.35e-09;53!CL:0000540;6.10e-09;6!CL:0000404;6.10e-09;6!CL:0000785;3.56e-07;1!CL:0000819;3.56e-07;1!CL:0002087;8.47e-07;104!CL:0000946;8.72e-07;1!CL:0000786;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.53e-30,24;CL:0000826,1.53e-30,24;CL:0002619,1.94e-18,3;CL:0000236,2.15e-18,14;CL:0000784,2.75e-18,3;CL:0000047,2.80e-17,8;CL:0000542,6.51e-15,53;CL:0000051,6.51e-15,53;CL:0000738,1.45e-13,136;CL:0002087,2.69e-13,115;CL:0000838,7.71e-13,52;CL:0000785,2.49e-12,2;CL:0000955,2.49e-12,2;CL:0000818,2.49e-12,2;CL:0000954,2.49e-12,2;CL:0000816,2.49e-12,2;CL:0000037,2.48e-11,168;CL:0002031,4.43e-11,120;CL:0000988,1.59e-10,177;CL:0002032,1.82e-09,161;CL:0000837,1.82e-09,161;CL:0000540,4.52e-09,6;CL:0000031,4.52e-09,6;CL:0000404,4.52e-09,6;CL:0000817,1.66e-08,3;CL:0000819,4.51e-07,1;CL:0000946,6.38e-07,1;CL:0000786,6.38e-07,1;CL:0000980,6.38e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000954;2.70e-12;2!CL:0000051;2.35e-09;53!CL:0000031;6.10e-09;6!UBERON:0001045;8.72e-07;1 | |||
|ontology_enrichment_disease=DOID:2531!9.25e-07!51;DOID:0060083!9.25e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.56e-07;1!DOID:8675;3.56e-07;1!DOID:12603;3.56e-07;1!DOID:630;8.72e-07;1!DOID:0050177;8.72e-07;1!DOID:4960;8.72e-07;1!DOID:0070004;8.72e-07;1!DOID:0050427;8.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.25e-07,1;DOID:0060073,4.51e-07,1;DOID:8675,4.51e-07,1;DOID:4960,7.15e-07,1;DOID:0070004,7.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.74e-20!34;UBERON:0001869!3.92e-20!32;UBERON:0002020!5.19e-20!34;UBERON:0003528!5.19e-20!34;UBERON:0007023!1.66e-19!115;UBERON:0002791!2.00e-19!33;UBERON:0001049!1.00e-17!57;UBERON:0005068!1.00e-17!57;UBERON:0006241!1.00e-17!57;UBERON:0007135!1.00e-17!57;UBERON:0000956!6.38e-17!25;UBERON:0000203!6.38e-17!25;UBERON:0002780!7.56e-17!41;UBERON:0001890!7.56e-17!41;UBERON:0006240!7.56e-17!41;UBERON:0003080!2.88e-16!42;UBERON:0001017!3.03e-16!82;UBERON:0005743!4.67e-16!86;UBERON:0002619!6.47e-16!22;UBERON:0002616!1.53e-15!59;UBERON:0001950!9.60e-14!20;UBERON:0000073!1.87e-13!94;UBERON:0001016!1.87e-13!94;UBERON:0000955!1.40e-12!69;UBERON:0006238!1.40e-12!69;UBERON:0002390!2.04e-10!102;UBERON:0003061!2.04e-10!102;UBERON:0003075!3.35e-10!86;UBERON:0007284!3.35e-10!86;UBERON:0002346!3.42e-10!90;UBERON:0003056!6.41e-10!61;UBERON:0002193!2.40e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.12e-08;3!UBERON:0002372;8.72e-07;1!UBERON:0001154;8.72e-07;1!UBERON:0001153;8.72e-07;1!UBERON:0009854;8.72e-07;1!UBERON:0001961;8.72e-07;1!UBERON:0001744;8.72e-07;1!UBERON:0001042;8.72e-07;1!UBERON:0001735;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.63e-08,3;UBERON:0004854,3.63e-08,3;UBERON:0009034,3.63e-08,3;UBERON:0002095,3.63e-08,3;UBERON:0004782,3.63e-08,3;UBERON:0003281,3.63e-08,3;UBERON:0009664,3.63e-08,3;UBERON:0002296,3.63e-08,3;UBERON:0005602,3.63e-08,3;UBERON:0001179,3.63e-08,3;UBERON:0006293,3.63e-08,3;UBERON:0002372,9.51e-07,1;UBERON:0001961,9.51e-07,1;UBERON:0001744,9.51e-07,1;UBERON:0001735,9.51e-07,1 | |||
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|short_description=p6@POU2F1 | |||
}} |
Revision as of 01:34, 12 September 2013
Short description: | p6@POU2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_POU2F1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -32bp_to_ENST00000367862, NM_001198783_5end |
EntrezGene: | POU2F1 |
HGNC: | 9212 |
UniProt: | P14859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.53e-30 | 24 |
pro-B cell | 1.53e-30 | 24 |
adult endothelial progenitor cell | 1.94e-18 | 3 |
B cell | 2.15e-18 | 14 |
plasmacytoid dendritic cell | 2.75e-18 | 3 |
neuronal stem cell | 2.80e-17 | 8 |
lymphocyte | 6.51e-15 | 53 |
common lymphoid progenitor | 6.51e-15 | 53 |
leukocyte | 1.45e-13 | 136 |
nongranular leukocyte | 2.69e-13 | 115 |
lymphoid lineage restricted progenitor cell | 7.71e-13 | 52 |
mature B cell | 2.49e-12 | 2 |
pre-B-II cell | 2.49e-12 | 2 |
transitional stage B cell | 2.49e-12 | 2 |
small pre-B-II cell | 2.49e-12 | 2 |
immature B cell | 2.49e-12 | 2 |
hematopoietic stem cell | 2.48e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 4.43e-11 | 120 |
hematopoietic cell | 1.59e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.82e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-09 | 161 |
neuron | 4.52e-09 | 6 |
neuroblast | 4.52e-09 | 6 |
electrically signaling cell | 4.52e-09 | 6 |
precursor B cell | 1.66e-08 | 3 |
B-1 B cell | 4.51e-07 | 1 |
antibody secreting cell | 6.38e-07 | 1 |
plasma cell | 6.38e-07 | 1 |
plasmablast | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.63e-08 | 3 |
gastrointestinal system mesentery | 3.63e-08 | 3 |
stomach region | 3.63e-08 | 3 |
mesentery | 3.63e-08 | 3 |
gastrointestinal system serosa | 3.63e-08 | 3 |
mesentery of stomach | 3.63e-08 | 3 |
gut mesentery | 3.63e-08 | 3 |
dorsal mesentery | 3.63e-08 | 3 |
dorsal mesogastrium | 3.63e-08 | 3 |
peritoneal cavity | 3.63e-08 | 3 |
spleen primordium | 3.63e-08 | 3 |
tonsil | 9.51e-07 | 1 |
mucosa-associated lymphoid tissue | 9.51e-07 | 1 |
lymphoid tissue | 9.51e-07 | 1 |
tonsillar ring | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.25e-07 | 1 |
lymphatic system cancer | 4.51e-07 | 1 |
lymphosarcoma | 4.51e-07 | 1 |
bone marrow cancer | 7.15e-07 | 1 |
myeloma | 7.15e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.