FFCP PHASE1:Hg19::chr1:161481226..161481260,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C33|description=CAGE_peak_at_chr1:161481226..161481260,+|id=chr1:161481226..161481260,+|ontology_enrichment_celltype=CL:0000764!6.22e-11!2;CL:0000765!6.22e-11!2;CL:0000050!6.22e-11!2;CL:0000038!6.22e-11!2;CL:0000558!6.22e-11!2;CL:0000547!6.22e-11!2;CL:0000549!6.22e-11!2;CL:0000550!6.22e-11!2;CL:0000552!6.22e-11!2|ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2!CL:0000322;8.17e-11;3|ontology_enrichment_celltype_v019_2=CL:0000764,1.13e-57,2;CL:0000765,1.13e-57,2;CL:0000050,1.13e-57,2;CL:0000038,1.13e-57,2;CL:0000558,1.13e-57,2;CL:0000547,1.13e-57,2;CL:0000549,1.13e-57,2;CL:0000550,1.13e-57,2;CL:0000552,1.13e-57,2;CL:0000322,8.17e-11,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!4.55e-14!8|ontology_enrichment_disease_v019=DOID:3910;1.54e-15;2!DOID:3908;5.38e-07;5|ontology_enrichment_disease_v019_2=DOID:3910,1.54e-15,2;DOID:3908,5.38e-07,5|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;1.54e-15;2!UBERON:0002173;1.54e-15;2!UBERON:0002186;1.54e-15;2!UBERON:0004821;8.17e-11;3!UBERON:0007499;8.17e-11;3!UBERON:0003215;8.17e-11;3!UBERON:0010368;8.17e-11;3!UBERON:0009911;8.17e-11;3!UBERON:0002299;8.17e-11;3!UBERON:0006524;8.17e-11;3!UBERON:0008874;8.17e-11;3!UBERON:0002169;8.17e-11;3!UBERON:0004894;8.17e-11;3!UBERON:0009856;1.96e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.54e-15,2;UBERON:0002173,1.54e-15,2;UBERON:0002186,1.54e-15,2;UBERON:0004821,8.17e-11,3;UBERON:0003215,8.17e-11,3;UBERON:0010368,8.17e-11,3;UBERON:0009911,8.17e-11,3;UBERON:0002299,8.17e-11,3;UBERON:0006524,8.17e-11,3;UBERON:0008874,8.17e-11,3;UBERON:0002169,8.17e-11,3;UBERON:0004894,8.17e-11,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.95264877478,24.8363678473655,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.671286347903371,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.640724475406168,1.72924735609633,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.444925607568277,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr1:161481226..161481260,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr1:161481226..161481260,+ | |||
|id=chr1:161481226..161481260,+ | |||
|ontology_enrichment_celltype=CL:0000764!6.22e-11!2;CL:0000765!6.22e-11!2;CL:0000050!6.22e-11!2;CL:0000038!6.22e-11!2;CL:0000558!6.22e-11!2;CL:0000547!6.22e-11!2;CL:0000549!6.22e-11!2;CL:0000550!6.22e-11!2;CL:0000552!6.22e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.13e-57;2!CL:0000558;1.13e-57;2!CL:0000322;8.17e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.13e-57,2;CL:0000765,1.13e-57,2;CL:0000050,1.13e-57,2;CL:0000038,1.13e-57,2;CL:0000558,1.13e-57,2;CL:0000547,1.13e-57,2;CL:0000549,1.13e-57,2;CL:0000550,1.13e-57,2;CL:0000552,1.13e-57,2;CL:0000322,8.17e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.55e-14!8 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.54e-15;2!DOID:3908;5.38e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.54e-15,2;DOID:3908,5.38e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.54e-15;2!UBERON:0002173;1.54e-15;2!UBERON:0002186;1.54e-15;2!UBERON:0004821;8.17e-11;3!UBERON:0007499;8.17e-11;3!UBERON:0003215;8.17e-11;3!UBERON:0010368;8.17e-11;3!UBERON:0009911;8.17e-11;3!UBERON:0002299;8.17e-11;3!UBERON:0006524;8.17e-11;3!UBERON:0008874;8.17e-11;3!UBERON:0002169;8.17e-11;3!UBERON:0004894;8.17e-11;3!UBERON:0009856;1.96e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.54e-15,2;UBERON:0002173,1.54e-15,2;UBERON:0002186,1.54e-15,2;UBERON:0004821,8.17e-11,3;UBERON:0003215,8.17e-11,3;UBERON:0010368,8.17e-11,3;UBERON:0009911,8.17e-11,3;UBERON:0002299,8.17e-11,3;UBERON:0006524,8.17e-11,3;UBERON:0008874,8.17e-11,3;UBERON:0002169,8.17e-11,3;UBERON:0004894,8.17e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.95264877478,24.8363678473655,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.671286347903371,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.640724475406168,1.72924735609633,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.444925607568277,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:161481226..161481260,+ | |||
}} |
Revision as of 01:24, 12 September 2013
Short description: | p@chr1:161481226..161481260, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:161481226..161481260, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.13e-57 | 2 |
erythroblast | 1.13e-57 | 2 |
megakaryocyte-erythroid progenitor cell | 1.13e-57 | 2 |
erythroid progenitor cell | 1.13e-57 | 2 |
reticulocyte | 1.13e-57 | 2 |
proerythroblast | 1.13e-57 | 2 |
basophilic erythroblast | 1.13e-57 | 2 |
polychromatophilic erythroblast | 1.13e-57 | 2 |
orthochromatic erythroblast | 1.13e-57 | 2 |
pneumocyte | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.54e-15 | 2 |
alveolar duct | 1.54e-15 | 2 |
bronchiole | 1.54e-15 | 2 |
pulmonary alveolus epithelium | 8.17e-11 | 3 |
alveolus | 8.17e-11 | 3 |
pulmonary lobule | 8.17e-11 | 3 |
lobule | 8.17e-11 | 3 |
alveolus of lung | 8.17e-11 | 3 |
alveolar system | 8.17e-11 | 3 |
pulmonary acinus | 8.17e-11 | 3 |
alveolar sac | 8.17e-11 | 3 |
alveolar wall | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.54e-15 | 2 |
non-small cell lung carcinoma | 5.38e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.