FFCP PHASE1:Hg19::chr1:155972448..155972477,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-93bp_to_ENST00000454974_5end|description=CAGE_peak_1_at_ENST00000454974_5end|id=chr1:155972448..155972477,-|ontology_enrichment_celltype=CL:0000066!5.23e-10!254;CL:0000223!3.09e-07!59|ontology_enrichment_celltype_v019=CL:0002178;1.93e-09;3!CL:0002379;2.17e-07;1|ontology_enrichment_celltype_v019_2=CL:0002178,1.81e-09,3;CL:0002379,2.80e-07,1|ontology_enrichment_development_v019=UBERON:0008947;1.01e-09;29!UBERON:0006242;6.80e-08;1|ontology_enrichment_disease=DOID:305!1.97e-14!106;DOID:0050687!3.27e-12!143;DOID:162!1.62e-10!235;DOID:14566!6.18e-10!239|ontology_enrichment_disease_v019=DOID:4960;5.58e-08;1!DOID:0070004;5.58e-08;1!DOID:3620;2.17e-07;1!DOID:3565;2.17e-07;1|ontology_enrichment_disease_v019_2=DOID:4960,5.58e-08,1;DOID:0070004,5.58e-08,1;DOID:3620,2.80e-07,1;DOID:3565,2.80e-07,1|ontology_enrichment_uberon=UBERON:0004119!7.91e-28!169;UBERON:0000925!7.91e-28!169;UBERON:0006595!7.91e-28!169;UBERON:0001007!5.58e-25!155;UBERON:0001555!5.58e-25!155;UBERON:0007026!5.58e-25!155;UBERON:0004921!2.50e-24!129;UBERON:0004185!2.50e-24!129;UBERON:0000077!3.68e-18!130;UBERON:0001041!4.50e-16!98;UBERON:0008947!5.17e-15!38;UBERON:0003258!5.17e-15!38;UBERON:0005409!3.49e-13!35;UBERON:0000065!1.09e-12!53;UBERON:0001737!3.73e-12!9;UBERON:0001004!1.08e-10!72;UBERON:0005911!3.74e-10!82;UBERON:0000160!5.30e-09!27;UBERON:0000072!2.25e-08!46;UBERON:0005153!1.20e-07!37;UBERON:0005177!7.87e-07!107|ontology_enrichment_uberon_v019=UBERON:0005409;1.33e-16;22!UBERON:0000945;4.40e-12;5!UBERON:0010039;4.40e-12;5!UBERON:0004921;1.63e-09;33!UBERON:0000160;1.05e-08;17!UBERON:0002171;6.80e-08;1!UBERON:0006518;6.80e-08;1!UBERON:0008949;6.80e-08;1!UBERON:0000101;6.80e-08;1!UBERON:0002167;6.80e-08;1!UBERON:0001155;4.36e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.67e-14,25;UBERON:0001007,5.77e-09,145;UBERON:0001555,5.77e-09,145;UBERON:0007026,5.77e-09,145;UBERON:0004921,7.63e-09,118;UBERON:0000160,1.19e-08,17;UBERON:0002171,6.80e-08,1;UBERON:0006518,6.80e-08,1;UBERON:0008949,6.80e-08,1;UBERON:0000101,6.80e-08,1;UBERON:0002167,6.80e-08,1;UBERON:0004119,8.14e-08,160;UBERON:0000925,8.14e-08,160;UBERON:0006595,8.14e-08,160;UBERON:0000945,9.69e-08,8;UBERON:0010039,9.69e-08,8;UBERON:0008947,3.40e-07,38;UBERON:0003258,3.40e-07,38;UBERON:0001155,4.45e-07,9|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,0.674338760312407,1.20505514941741,0.55146986366197,0.217879444092406,0.949082476444386,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0.334330152832435,0,0.47748896947538,0,1.84296421259539,0,0,0.222617410045812,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0.718061155278177,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0,0,0.158936578980379,0,0,0,0,9.95261931078505,5.04208117669033,4.888241159469,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,1.19472429772959,0,3.05084280628905,0,0.195984794828755,0,0,0,3.28971526382889,4.16609107391258,3.77731102444762,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,5.54977786322317,1.39866726707491,8.06906336062993,0.229073192331831,0,0,0,0.235694034616795,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-93bp_to_ENST00000454974_5end | |||
|description=CAGE_peak_1_at_ENST00000454974_5end | |||
|id=chr1:155972448..155972477,- | |||
|ontology_enrichment_celltype=CL:0000066!5.23e-10!254;CL:0000223!3.09e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.93e-09;3!CL:0002379;2.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.81e-09,3;CL:0002379,2.80e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.01e-09;29!UBERON:0006242;6.80e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.97e-14!106;DOID:0050687!3.27e-12!143;DOID:162!1.62e-10!235;DOID:14566!6.18e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:4960;5.58e-08;1!DOID:0070004;5.58e-08;1!DOID:3620;2.17e-07;1!DOID:3565;2.17e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.58e-08,1;DOID:0070004,5.58e-08,1;DOID:3620,2.80e-07,1;DOID:3565,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.91e-28!169;UBERON:0000925!7.91e-28!169;UBERON:0006595!7.91e-28!169;UBERON:0001007!5.58e-25!155;UBERON:0001555!5.58e-25!155;UBERON:0007026!5.58e-25!155;UBERON:0004921!2.50e-24!129;UBERON:0004185!2.50e-24!129;UBERON:0000077!3.68e-18!130;UBERON:0001041!4.50e-16!98;UBERON:0008947!5.17e-15!38;UBERON:0003258!5.17e-15!38;UBERON:0005409!3.49e-13!35;UBERON:0000065!1.09e-12!53;UBERON:0001737!3.73e-12!9;UBERON:0001004!1.08e-10!72;UBERON:0005911!3.74e-10!82;UBERON:0000160!5.30e-09!27;UBERON:0000072!2.25e-08!46;UBERON:0005153!1.20e-07!37;UBERON:0005177!7.87e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.33e-16;22!UBERON:0000945;4.40e-12;5!UBERON:0010039;4.40e-12;5!UBERON:0004921;1.63e-09;33!UBERON:0000160;1.05e-08;17!UBERON:0002171;6.80e-08;1!UBERON:0006518;6.80e-08;1!UBERON:0008949;6.80e-08;1!UBERON:0000101;6.80e-08;1!UBERON:0002167;6.80e-08;1!UBERON:0001155;4.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.67e-14,25;UBERON:0001007,5.77e-09,145;UBERON:0001555,5.77e-09,145;UBERON:0007026,5.77e-09,145;UBERON:0004921,7.63e-09,118;UBERON:0000160,1.19e-08,17;UBERON:0002171,6.80e-08,1;UBERON:0006518,6.80e-08,1;UBERON:0008949,6.80e-08,1;UBERON:0000101,6.80e-08,1;UBERON:0002167,6.80e-08,1;UBERON:0004119,8.14e-08,160;UBERON:0000925,8.14e-08,160;UBERON:0006595,8.14e-08,160;UBERON:0000945,9.69e-08,8;UBERON:0010039,9.69e-08,8;UBERON:0008947,3.40e-07,38;UBERON:0003258,3.40e-07,38;UBERON:0001155,4.45e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.18306800039844,0.674338760312407,1.20505514941741,0.55146986366197,0.217879444092406,0.949082476444386,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0.334330152832435,0,0.47748896947538,0,1.84296421259539,0,0,0.222617410045812,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.945550727071745,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0.718061155278177,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0,0,0.158936578980379,0,0,0,0,9.95261931078505,5.04208117669033,4.888241159469,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,1.19472429772959,0,3.05084280628905,0,0.195984794828755,0,0,0,3.28971526382889,4.16609107391258,3.77731102444762,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0.195551382734803,0,5.54977786322317,1.39866726707491,8.06906336062993,0.229073192331831,0,0,0,0.235694034616795,0.815425236441684,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.412079291905832,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.209818352539992,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,1.53978154095896,0.704815022316672,3.09683496446315,8.33182817028229,5.38510771951354,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0.414706207840855,0,0,0.450772826991655,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0.244736704506468,0.179088841081487,0.308801447160972,0,0,0.578742114812744,0.337884881306145,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,6.88859918643263,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.638812138197976,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0.235479278551542,0,0,0.913158720509496,0.215927591218621,0,0.285906176706625,0,1.3948971044175,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,5.36438869921985,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,2.62392137567012,0.874238242015829,17.4017399653763,0.245148321753905,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,4.3820183294791,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,1.42838658878244,0,0,0.448527450322454,0.827413057616144,1.81905470062397,0,0,0.0673520530145875,1.14755528628282,0,0,0.213454691755431,0,2.87440646741078,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000454974 | |||
}} |
Revision as of 00:49, 12 September 2013
Short description: | p1@ENST00000454974 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000454974_5end |
Coexpression cluster: | NA |
Association with transcript: | -93bp_to_ENST00000454974_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.81e-09 | 3 |
meningothelial cell | 2.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.67e-14 | 25 |
digestive system | 5.77e-09 | 145 |
digestive tract | 5.77e-09 | 145 |
primitive gut | 5.77e-09 | 145 |
subdivision of digestive tract | 7.63e-09 | 118 |
intestine | 1.19e-08 | 17 |
lower lobe of right lung | 6.80e-08 | 1 |
right lung lobe | 6.80e-08 | 1 |
lower lobe of lung | 6.80e-08 | 1 |
lobe of lung | 6.80e-08 | 1 |
right lung | 6.80e-08 | 1 |
endoderm-derived structure | 8.14e-08 | 160 |
endoderm | 8.14e-08 | 160 |
presumptive endoderm | 8.14e-08 | 160 |
stomach | 9.69e-08 | 8 |
food storage organ | 9.69e-08 | 8 |
respiratory primordium | 3.40e-07 | 38 |
endoderm of foregut | 3.40e-07 | 38 |
colon | 4.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.58e-08 | 1 |
myeloma | 5.58e-08 | 1 |
central nervous system cancer | 2.80e-07 | 1 |
meningioma | 2.80e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.