FFCP PHASE1:Hg19::chr1:150482004..150482012,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C766|description=CAGE_peak_at_chr1:150482004..150482012,+|id=chr1:150482004..150482012,+|ontology_enrichment_celltype=CL:0000057!2.12e-15!75;CL:0000055!4.70e-12!180;CL:0002334!1.41e-08!12|ontology_enrichment_celltype_v019=CL:0002567;4.05e-27;3!CL:0000346;2.56e-26;3!CL:1000428;2.56e-26;3!CL:0002559;4.70e-16;5!CL:0002581;6.05e-10;1!CL:0000148;1.57e-08;10!CL:0002552;5.78e-08;5!CL:0002334;5.42e-07;12|ontology_enrichment_celltype_v019_2=CL:0002567,2.50e-27,3;CL:0000346,1.03e-26,3;CL:1000428,1.03e-26,3;CL:0002559,2.73e-16,5;CL:0002581,5.30e-10,1;CL:0000333,2.73e-09,41;CL:0000148,1.37e-08,10;CL:0000541,1.37e-08,10;CL:0002552,5.89e-08,5;CL:0002334,5.49e-07,12|ontology_enrichment_development_v019=UBERON:0009143;1.72e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.74e-10!95;UBERON:0002199!1.06e-08!45;UBERON:0002416!1.06e-08!45;UBERON:0002097!1.93e-08!40|ontology_enrichment_uberon_v019=UBERON:0000412;2.56e-26;3!UBERON:0001992;2.56e-26;3!UBERON:0002073;4.70e-16;5!UBERON:0001301;6.05e-10;1!UBERON:0007195;6.05e-10;1!UBERON:0001003;2.21e-09;15!UBERON:0007376;2.21e-09;15!UBERON:0002067;3.65e-09;9|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.03e-26,3;UBERON:0001992,1.03e-26,3;UBERON:0002073,2.73e-16,5;UBERON:0005086,2.73e-16,5;UBERON:0001301,3.40e-10,1;UBERON:0007195,1.07e-09,1;UBERON:0001003,1.81e-09,15;UBERON:0007376,1.81e-09,15;UBERON:0007383,1.81e-09,15;UBERON:0002067,2.71e-09,9;UBERON:0004016,2.71e-09,9;UBERON:0010083,2.71e-09,9;UBERON:0004923,2.08e-07,66|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,1.43418310374407,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.309977343527296,2.37600571456411,1.23633464639278,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.600952235626387,0,0.358779271377724,0,0,0.600182192168805,0.206105058476878,0,1.11670113798954,0.843881661206331,0.194874010322397,0.252433774244115,0.368199594569197,0.484938170456436,0,0.201504196455281,0,0,0.545492241181669,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0,0.253991577168676,2.29193055334967,2.34434894420094,1.71072446022705,0,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.473107245101804,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,1.15325234330131,0,0.160853921143607,1.48418066444991,0.771048469013278,0.355123450626254,0.410635780069046,1.55776328755086,0.116210378459959,0,0,0.184161977871793,0.114814448164607,0.546273504020151,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0.2023155617111,0,0.62962469366128,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.658589785919804,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0.293977192243133,0,1.92199335066233,0,0,0,0.0821154570532092,3.78257164304836,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C766 | |||
|description=CAGE_peak_at_chr1:150482004..150482012,+ | |||
|id=chr1:150482004..150482012,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.12e-15!75;CL:0000055!4.70e-12!180;CL:0002334!1.41e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002567;4.05e-27;3!CL:0000346;2.56e-26;3!CL:1000428;2.56e-26;3!CL:0002559;4.70e-16;5!CL:0002581;6.05e-10;1!CL:0000148;1.57e-08;10!CL:0002552;5.78e-08;5!CL:0002334;5.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.50e-27,3;CL:0000346,1.03e-26,3;CL:1000428,1.03e-26,3;CL:0002559,2.73e-16,5;CL:0002581,5.30e-10,1;CL:0000333,2.73e-09,41;CL:0000148,1.37e-08,10;CL:0000541,1.37e-08,10;CL:0002552,5.89e-08,5;CL:0002334,5.49e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.72e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.74e-10!95;UBERON:0002199!1.06e-08!45;UBERON:0002416!1.06e-08!45;UBERON:0002097!1.93e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.56e-26;3!UBERON:0001992;2.56e-26;3!UBERON:0002073;4.70e-16;5!UBERON:0001301;6.05e-10;1!UBERON:0007195;6.05e-10;1!UBERON:0001003;2.21e-09;15!UBERON:0007376;2.21e-09;15!UBERON:0002067;3.65e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.03e-26,3;UBERON:0001992,1.03e-26,3;UBERON:0002073,2.73e-16,5;UBERON:0005086,2.73e-16,5;UBERON:0001301,3.40e-10,1;UBERON:0007195,1.07e-09,1;UBERON:0001003,1.81e-09,15;UBERON:0007376,1.81e-09,15;UBERON:0007383,1.81e-09,15;UBERON:0002067,2.71e-09,9;UBERON:0004016,2.71e-09,9;UBERON:0010083,2.71e-09,9;UBERON:0004923,2.08e-07,66 | |||
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|short_description=p@chr1:150482004..150482012,+ | |||
}} |
Revision as of 00:14, 12 September 2013
Short description: | p@chr1:150482004..150482012, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:150482004..150482012, + |
Coexpression cluster: | C766_Smooth_esophagus_throat_epididymis_Fibroblast_tonsil_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.50e-27 | 3 |
hair follicle dermal papilla cell | 1.03e-26 | 3 |
stem cell of epidermis | 1.03e-26 | 3 |
hair follicle cell | 2.73e-16 | 5 |
perirenal preadipocyte | 5.30e-10 | 1 |
migratory neural crest cell | 2.73e-09 | 41 |
melanocyte | 1.37e-08 | 10 |
melanoblast | 1.37e-08 | 10 |
fibroblast of gingiva | 5.89e-08 | 5 |
preadipocyte | 5.49e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.03e-26 | 3 |
papillary layer of dermis | 1.03e-26 | 3 |
hair follicle | 2.73e-16 | 5 |
hair follicle placode | 2.73e-16 | 5 |
epididymis | 3.40e-10 | 1 |
stroma of bone marrow | 1.07e-09 | 1 |
skin epidermis | 1.81e-09 | 15 |
outer epithelium | 1.81e-09 | 15 |
enveloping layer of ectoderm | 1.81e-09 | 15 |
dermis | 2.71e-09 | 9 |
dermatome | 2.71e-09 | 9 |
future dermis | 2.71e-09 | 9 |
organ component layer | 2.08e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.