FFCP PHASE1:Hg19::chr19:49838937..49838974,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C590|description=CAGE_peak_at_chr19:49838937..49838974,+|id=chr19:49838937..49838974,+|ontology_enrichment_celltype=CL:0000037!1.84e-92!172;CL:0000566!1.84e-92!172;CL:0000738!5.64e-90!140;CL:0002032!6.22e-88!165;CL:0000837!6.22e-88!165;CL:0000988!1.33e-84!182;CL:0002087!1.32e-76!119;CL:0002031!5.94e-74!124;CL:0000763!1.25e-47!112;CL:0000049!1.25e-47!112;CL:0000766!5.69e-46!76;CL:0000557!5.14e-39!71;CL:0000839!4.78e-37!70;CL:0002194!1.05e-35!63;CL:0000576!1.05e-35!63;CL:0000040!1.05e-35!63;CL:0000559!1.05e-35!63;CL:0002009!2.43e-35!65;CL:0000542!3.09e-35!53;CL:0000051!3.09e-35!53;CL:0000838!3.08e-34!52;CL:0002057!4.19e-30!42;CL:0000860!4.71e-27!45;CL:0000134!6.69e-21!358;CL:0000945!9.47e-21!24;CL:0000826!9.47e-21!24;CL:0002320!1.13e-19!365;CL:0000219!1.96e-15!390;CL:0000791!9.07e-15!18;CL:0000789!9.07e-15!18;CL:0002420!9.07e-15!18;CL:0002419!9.07e-15!18;CL:0000790!9.07e-15!18;CL:0000236!3.16e-13!14;CL:0000084!9.99e-13!25;CL:0000827!9.99e-13!25;CL:0000048!5.42e-11!430;CL:0000723!2.51e-10!436;CL:0000034!3.00e-10!444;CL:0000625!7.00e-10!11;CL:0002393!1.65e-09!9;CL:0002397!1.65e-09!9;CL:0000094!2.06e-08!8|ontology_enrichment_celltype_v019=CL:0000473;2.50e-25;39!CL:0000234;2.50e-25;39!CL:0000945;2.18e-23;24!CL:0000542;3.28e-23;53!CL:0002087;4.78e-23;104!CL:0000860;5.69e-23;33!CL:0002057;5.69e-23;33!CL:0000766;6.44e-23;69!CL:0000576;5.26e-21;48!CL:0000738;2.08e-19;136!CL:0000791;3.59e-17;18!CL:0000789;3.59e-17;18!CL:0002419;3.59e-17;18!CL:0000236;1.31e-16;13!CL:0000084;3.01e-14;25!CL:0000988;4.07e-14;177!CL:0000763;3.26e-13;100!CL:0000625;8.85e-11;11!CL:0000094;1.76e-10;8!CL:0000235;4.78e-09;6!CL:0000219;6.64e-08;193!CL:0000624;2.72e-07;6!CL:0000081;3.92e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,1.41e-97,136;CL:0002087,4.19e-88,115;CL:0000037,2.65e-87,168;CL:0002031,1.08e-83,120;CL:0002032,4.32e-83,161;CL:0000837,4.32e-83,161;CL:0000988,4.15e-81,177;CL:0000766,4.56e-54,72;CL:0000557,1.32e-43,67;CL:0000839,7.64e-43,66;CL:0000473,1.05e-41,48;CL:0000234,1.05e-41,48;CL:0002194,1.13e-40,59;CL:0000576,1.13e-40,59;CL:0000040,1.13e-40,59;CL:0000559,1.13e-40,59;CL:0000542,2.31e-40,53;CL:0000051,2.31e-40,53;CL:0000763,1.23e-39,108;CL:0000049,1.23e-39,108;CL:0000838,4.48e-39,52;CL:0002009,7.98e-39,61;CL:0000860,3.12e-34,42;CL:0002057,3.12e-34,42;CL:0000134,1.15e-23,354;CL:0000945,2.02e-23,24;CL:0000826,2.02e-23,24;CL:0002320,1.41e-22,361;CL:0000219,8.88e-19,386;CL:0000236,2.95e-17,14;CL:0000791,3.47e-17,18;CL:0000789,3.47e-17,18;CL:0002420,3.47e-17,18;CL:0002419,3.47e-17,18;CL:0000790,3.47e-17,18;CL:0000048,3.21e-14,427;CL:0000084,3.53e-14,25;CL:0000827,3.53e-14,25;CL:0000723,1.33e-13,433;CL:0000034,2.55e-13,441;CL:0000625,1.06e-10,11;CL:0000094,1.16e-10,8;CL:0002393,3.84e-10,9;CL:0002397,3.84e-10,9;CL:0000235,4.81e-09,6;CL:0000624,2.15e-07,6;CL:0000081,2.96e-07,11|ontology_enrichment_development_v019=CL:0002057;2.84e-24;42!CL:0000051;3.28e-23;53!CL:0000790;3.59e-17;18!CL:0000049;2.44e-12;108|ontology_enrichment_disease=DOID:2531!2.44e-09!51;DOID:0060083!2.44e-09!51;DOID:1240!6.88e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.51e-47!102;UBERON:0003061!1.51e-47!102;UBERON:0002193!2.27e-43!112;UBERON:0002371!1.72e-34!80;UBERON:0001474!1.79e-30!86;UBERON:0002405!3.26e-27!115;UBERON:0004765!1.21e-22!101;UBERON:0001434!1.21e-22!101;UBERON:0002384!1.67e-18!375;UBERON:0003081!4.99e-11!216;UBERON:0000178!4.48e-09!15;UBERON:0000179!4.48e-09!15;UBERON:0000463!4.48e-09!15;UBERON:0002204!3.86e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;5.77e-12;15!UBERON:0000179;5.77e-12;15!UBERON:0000463;5.77e-12;15!UBERON:0002390;2.40e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.70e-55,98;UBERON:0003061,3.70e-55,98;UBERON:0002193,3.67e-51,108;UBERON:0002405,8.72e-40,93;UBERON:0002371,7.97e-38,76;UBERON:0001474,8.88e-34,82;UBERON:0004765,3.06e-29,90;UBERON:0001434,1.27e-24,100;UBERON:0002384,4.23e-21,371;UBERON:0003081,6.72e-16,203;UBERON:0000178,4.99e-12,15;UBERON:0000179,4.99e-12,15;UBERON:0000463,4.99e-12,15;UBERON:0002204,1.08e-08,167;UBERON:0004177,5.93e-07,7;UBERON:0005057,5.93e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58480434487708,4.67973359864691,2.91229890860613,5.11373559903575,5.37361157336098,3.2511385896376,0,0,0,6.27484324700443,5.11809236954717,1.17440175733939,1.66198622559563,1.60435557976113,0.651032612147555,0.895661896959697,2.26725566213286,1.03030227053675,2.32637182047304,3.40088349319928,1.69808842831471,1.16214518452842,2.05583944010913,0.929119112685311,3.16461631554365,3.07392847834921,0.945928919554341,1.72372840368309,4.51839278508678,0,2.63539275359647,3.0019676506363,1.57306439111559,2.14258724659632,5.77672248736969,3.19668562899521,2.63881040149373,3.39088217956774,2.131123752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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_at_chr19:49838937..49838974,+ | |||
|id=chr19:49838937..49838974,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.84e-92!172;CL:0000566!1.84e-92!172;CL:0000738!5.64e-90!140;CL:0002032!6.22e-88!165;CL:0000837!6.22e-88!165;CL:0000988!1.33e-84!182;CL:0002087!1.32e-76!119;CL:0002031!5.94e-74!124;CL:0000763!1.25e-47!112;CL:0000049!1.25e-47!112;CL:0000766!5.69e-46!76;CL:0000557!5.14e-39!71;CL:0000839!4.78e-37!70;CL:0002194!1.05e-35!63;CL:0000576!1.05e-35!63;CL:0000040!1.05e-35!63;CL:0000559!1.05e-35!63;CL:0002009!2.43e-35!65;CL:0000542!3.09e-35!53;CL:0000051!3.09e-35!53;CL:0000838!3.08e-34!52;CL:0002057!4.19e-30!42;CL:0000860!4.71e-27!45;CL:0000134!6.69e-21!358;CL:0000945!9.47e-21!24;CL:0000826!9.47e-21!24;CL:0002320!1.13e-19!365;CL:0000219!1.96e-15!390;CL:0000791!9.07e-15!18;CL:0000789!9.07e-15!18;CL:0002420!9.07e-15!18;CL:0002419!9.07e-15!18;CL:0000790!9.07e-15!18;CL:0000236!3.16e-13!14;CL:0000084!9.99e-13!25;CL:0000827!9.99e-13!25;CL:0000048!5.42e-11!430;CL:0000723!2.51e-10!436;CL:0000034!3.00e-10!444;CL:0000625!7.00e-10!11;CL:0002393!1.65e-09!9;CL:0002397!1.65e-09!9;CL:0000094!2.06e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.50e-25;39!CL:0000234;2.50e-25;39!CL:0000945;2.18e-23;24!CL:0000542;3.28e-23;53!CL:0002087;4.78e-23;104!CL:0000860;5.69e-23;33!CL:0002057;5.69e-23;33!CL:0000766;6.44e-23;69!CL:0000576;5.26e-21;48!CL:0000738;2.08e-19;136!CL:0000791;3.59e-17;18!CL:0000789;3.59e-17;18!CL:0002419;3.59e-17;18!CL:0000236;1.31e-16;13!CL:0000084;3.01e-14;25!CL:0000988;4.07e-14;177!CL:0000763;3.26e-13;100!CL:0000625;8.85e-11;11!CL:0000094;1.76e-10;8!CL:0000235;4.78e-09;6!CL:0000219;6.64e-08;193!CL:0000624;2.72e-07;6!CL:0000081;3.92e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.41e-97,136;CL:0002087,4.19e-88,115;CL:0000037,2.65e-87,168;CL:0002031,1.08e-83,120;CL:0002032,4.32e-83,161;CL:0000837,4.32e-83,161;CL:0000988,4.15e-81,177;CL:0000766,4.56e-54,72;CL:0000557,1.32e-43,67;CL:0000839,7.64e-43,66;CL:0000473,1.05e-41,48;CL:0000234,1.05e-41,48;CL:0002194,1.13e-40,59;CL:0000576,1.13e-40,59;CL:0000040,1.13e-40,59;CL:0000559,1.13e-40,59;CL:0000542,2.31e-40,53;CL:0000051,2.31e-40,53;CL:0000763,1.23e-39,108;CL:0000049,1.23e-39,108;CL:0000838,4.48e-39,52;CL:0002009,7.98e-39,61;CL:0000860,3.12e-34,42;CL:0002057,3.12e-34,42;CL:0000134,1.15e-23,354;CL:0000945,2.02e-23,24;CL:0000826,2.02e-23,24;CL:0002320,1.41e-22,361;CL:0000219,8.88e-19,386;CL:0000236,2.95e-17,14;CL:0000791,3.47e-17,18;CL:0000789,3.47e-17,18;CL:0002420,3.47e-17,18;CL:0002419,3.47e-17,18;CL:0000790,3.47e-17,18;CL:0000048,3.21e-14,427;CL:0000084,3.53e-14,25;CL:0000827,3.53e-14,25;CL:0000723,1.33e-13,433;CL:0000034,2.55e-13,441;CL:0000625,1.06e-10,11;CL:0000094,1.16e-10,8;CL:0002393,3.84e-10,9;CL:0002397,3.84e-10,9;CL:0000235,4.81e-09,6;CL:0000624,2.15e-07,6;CL:0000081,2.96e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.84e-24;42!CL:0000051;3.28e-23;53!CL:0000790;3.59e-17;18!CL:0000049;2.44e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!2.44e-09!51;DOID:0060083!2.44e-09!51;DOID:1240!6.88e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-47!102;UBERON:0003061!1.51e-47!102;UBERON:0002193!2.27e-43!112;UBERON:0002371!1.72e-34!80;UBERON:0001474!1.79e-30!86;UBERON:0002405!3.26e-27!115;UBERON:0004765!1.21e-22!101;UBERON:0001434!1.21e-22!101;UBERON:0002384!1.67e-18!375;UBERON:0003081!4.99e-11!216;UBERON:0000178!4.48e-09!15;UBERON:0000179!4.48e-09!15;UBERON:0000463!4.48e-09!15;UBERON:0002204!3.86e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.77e-12;15!UBERON:0000179;5.77e-12;15!UBERON:0000463;5.77e-12;15!UBERON:0002390;2.40e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.70e-55,98;UBERON:0003061,3.70e-55,98;UBERON:0002193,3.67e-51,108;UBERON:0002405,8.72e-40,93;UBERON:0002371,7.97e-38,76;UBERON:0001474,8.88e-34,82;UBERON:0004765,3.06e-29,90;UBERON:0001434,1.27e-24,100;UBERON:0002384,4.23e-21,371;UBERON:0003081,6.72e-16,203;UBERON:0000178,4.99e-12,15;UBERON:0000179,4.99e-12,15;UBERON:0000463,4.99e-12,15;UBERON:0002204,1.08e-08,167;UBERON:0004177,5.93e-07,7;UBERON:0005057,5.93e-07,7 | |||
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| |||
|short_description=p@chr19:49838937..49838974,+ | |||
}} |
Revision as of 21:45, 11 September 2013
Short description: | p@chr19:49838937..49838974, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:49838937..49838974, + |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.70e-55 | 98 |
blood island | 3.70e-55 | 98 |
hemolymphoid system | 3.67e-51 | 108 |
immune system | 8.72e-40 | 93 |
bone marrow | 7.97e-38 | 76 |
bone element | 8.88e-34 | 82 |
skeletal element | 3.06e-29 | 90 |
skeletal system | 1.27e-24 | 100 |
connective tissue | 4.23e-21 | 371 |
lateral plate mesoderm | 6.72e-16 | 203 |
blood | 4.99e-12 | 15 |
haemolymphatic fluid | 4.99e-12 | 15 |
organism substance | 4.99e-12 | 15 |
musculoskeletal system | 1.08e-08 | 167 |
hemopoietic organ | 5.93e-07 | 7 |
immune organ | 5.93e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.