FFCP PHASE1:Hg19::chr19:42463447..42463513,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10567 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9794 | |||
|TSSclassifier=W | |||
|UniProt=Q9UI14 | |||
|association_with_transcript=14bp_to_ENST00000222008,NM_006423,uc002osf.2_5end | |||
|coexpression_cluster_id=C1353 | |||
|description=CAGE_peak_1_at_RABAC1_5end | |||
|id=chr19:42463447..42463513,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-31!180;CL:0000183!1.06e-22!59;CL:0000222!1.35e-22!119;CL:0000680!1.15e-21!57;CL:0000056!1.15e-21!57;CL:0000355!1.15e-21!57;CL:0000187!8.69e-21!54;CL:0000393!2.08e-20!60;CL:0000211!2.08e-20!60;CL:0000192!5.79e-20!42;CL:0000514!5.79e-20!42;CL:0000144!5.46e-19!625;CL:0000359!4.13e-17!32;CL:0002371!6.47e-16!591;CL:0002321!9.96e-16!248;CL:0000220!1.34e-15!246;CL:0000057!1.49e-12!75;CL:0000012!1.48e-08!682;CL:0000548!2.76e-08!679;CL:0000004!2.76e-08!679;CL:0000255!2.76e-08!679;CL:0002494!1.74e-07!16;CL:0000034!7.78e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.91e-16;32!CL:0000192;2.58e-14;43!CL:0000187;1.68e-11;55!CL:0000393;1.32e-10;61!CL:0000211;1.32e-10;61!CL:0000134;2.20e-09;55!CL:0000723;6.24e-08;61!CL:0000048;1.09e-07;58!CL:0002494;1.74e-07;16!CL:0000349;1.77e-07;19!CL:0000034;4.06e-07;69 | |||
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| |||
|short_description=p1@RABAC1 | |||
}} |
Revision as of 20:52, 11 September 2013
Short description: | p1@RABAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RABAC1_5end |
Coexpression cluster: | C1353_Mesenchymal_Preadipocyte_basal_Adipocyte_Fibroblast_Smooth_leiomyoma |
Association with transcript: | 14bp_to_ENST00000222008, NM_006423, uc002osf.2_5end |
EntrezGene: | RABAC1 |
HGNC: | 9794 |
UniProt: | Q9UI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.01e-23 | 121 |
muscle precursor cell | 8.87e-22 | 58 |
myoblast | 8.87e-22 | 58 |
multi-potent skeletal muscle stem cell | 8.87e-22 | 58 |
muscle cell | 6.77e-21 | 55 |
electrically responsive cell | 1.56e-20 | 61 |
electrically active cell | 1.56e-20 | 61 |
smooth muscle cell | 4.91e-20 | 43 |
smooth muscle myoblast | 4.91e-20 | 43 |
vascular associated smooth muscle cell | 4.13e-17 | 32 |
embryonic cell | 4.60e-16 | 250 |
fibroblast | 6.00e-13 | 76 |
stem cell | 1.49e-07 | 441 |
cardiocyte | 1.74e-07 | 16 |
extraembryonic cell | 1.75e-07 | 19 |
multi fate stem cell | 2.71e-07 | 427 |
somatic stem cell | 4.33e-07 | 433 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.