FFCP PHASE1:Hg19::chr19:19779686..19779697,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=94039|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12881|TSSclassifier=S|UniProt=Q0VDG9|association_with_transcript=-12bp_to_ENST00000415784_5end|coexpression_cluster_id=C144|description=CAGE_peak_3_at_ZNF101_5end|id=chr19:19779686..19779697,+|ontology_enrichment_celltype=CL:0000542!1.69e-22!53;CL:0000051!1.69e-22!53;CL:0000838!2.00e-22!52;CL:0000738!1.27e-18!140;CL:0002087!1.70e-18!119;CL:0002031!5.13e-16!124;CL:0000037!2.75e-15!172;CL:0000566!2.75e-15!172;CL:0000988!1.34e-13!182;CL:0000791!1.50e-13!18;CL:0000789!1.50e-13!18;CL:0002420!1.50e-13!18;CL:0002419!1.50e-13!18;CL:0000790!1.50e-13!18;CL:0002032!2.58e-13!165;CL:0000837!2.58e-13!165;CL:0000084!5.50e-13!25;CL:0000827!5.50e-13!25;CL:0000945!5.15e-09!24;CL:0000826!5.15e-09!24;CL:0000625!7.38e-09!11;CL:0000236!5.80e-08!14|ontology_enrichment_celltype_v019=CL:0000791;3.63e-42;18!CL:0000789;3.63e-42;18!CL:0002419;3.63e-42;18!CL:0000084;1.49e-32;25!CL:0000542;3.48e-32;53!CL:0000625;2.85e-26;11!CL:0000945;4.85e-18;24!CL:0000236;3.81e-16;13!CL:0000624;1.11e-15;6!CL:0000898;5.85e-09;3!CL:0000623;5.14e-08;3!CL:0000226;6.93e-08;3!CL:0000842;6.93e-08;3!CL:0002087;1.19e-07;104|ontology_enrichment_celltype_v019_2=CL:0000838,5.10e-55,52;CL:0000542,9.05e-54,53;CL:0000051,9.05e-54,53;CL:0000791,2.64e-42,18;CL:0000789,2.64e-42,18;CL:0002420,2.64e-42,18;CL:0002419,2.64e-42,18;CL:0000790,2.64e-42,18;CL:0000084,1.18e-32,25;CL:0000827,1.18e-32,25;CL:0000625,2.66e-26,11;CL:0002087,1.30e-25,115;CL:0000738,1.10e-23,136;CL:0002031,6.22e-20,120;CL:0000037,6.99e-19,168;CL:0000945,4.60e-18,24;CL:0000826,4.60e-18,24;CL:0000988,2.68e-17,177;CL:0000624,1.05e-15,6;CL:0000236,6.02e-15,14;CL:0002032,7.50e-15,161;CL:0000837,7.50e-15,161;CL:0000898,6.19e-09,3;CL:0000623,6.18e-08,3;CL:0000825,6.18e-08,3;CL:0000226,7.30e-08,3;CL:0000842,7.30e-08,3|ontology_enrichment_development_v019=CL:0000790;3.63e-42;18!CL:0000051;3.48e-32;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-10;15!UBERON:0000179;1.17e-10;15!UBERON:0000463;1.17e-10;15!UBERON:0002390;2.82e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.80e-11,15;UBERON:0000179,9.80e-11,15;UBERON:0000463,9.80e-11,15;UBERON:0002370,8.28e-10,4;UBERON:0005058,8.28e-10,4;UBERON:0009113,8.28e-10,4;UBERON:0003295,8.28e-10,4;UBERON:0005562,8.28e-10,4;UBERON:0003351,1.58e-09,6;UBERON:0001042,8.43e-08,10;UBERON:0009145,8.43e-08,10;UBERON:0006562,5.02e-07,11|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,1.45185470921107,1.31360943119913,1.57421562627358,1.18009283054671,0.767658796194425,0,0,0.30120591877825,0.369754010166788,2.01414721508784,0.426507697462265,0,1.10799081706375,0.601633342410425,0.217010870715852,0.447830948479849,0.971680998056939,0.515151135268373,0.145398238779565,0,0.485168122375632,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0,0,0,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0.962787081228281,0.639337125799041,0.659702600373432,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0,0.182664153764634,3.51992488922645,1.09227722252426,1.77901850772711,0.426730222566507,3.2031678962881,2.87376219977242,1.32208974556972,2.86216126360609,2.27685187643779,1.76171156811282,0.764546456250458,0,1.68152568894461,0.526768169550154,8.45852011489482,4.32311839024081,2.67281948699362,29.7591961795407,16.6220355983131,17.0441210064504,7.79306913631645,11.0296352316322,10.3112067616193,7.53215241584312,9.74893909554056,15.370958367081,18.208308658383,1.64437904603676,0.829050053357545,0.869409257205157,4.44859689486181,6.68852070224283,5.22677619024884,4.30575502250752,6.13152789763074,5.49803912772208,5.31341353240956,7.00843911513013,6.51083453856419,6.65316431113862,3.76437797694432,4.99147783502232,6.24653632761729,6.39298580518846,1.64225599384209,3.62892137804518,2.13952156626806,6.08262496307756,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0.665188192387692,0.175669571386252,0.261958150995425,0,0,0.649094787309367,0.174129737299267,0.132957960518865,1.90792499444274,2.85997455390064,0.74291500265913,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=94039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12881 | |||
|TSSclassifier=S | |||
|UniProt=Q0VDG9 | |||
|association_with_transcript=-12bp_to_ENST00000415784_5end | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_3_at_ZNF101_5end | |||
|id=chr19:19779686..19779697,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.69e-22!53;CL:0000051!1.69e-22!53;CL:0000838!2.00e-22!52;CL:0000738!1.27e-18!140;CL:0002087!1.70e-18!119;CL:0002031!5.13e-16!124;CL:0000037!2.75e-15!172;CL:0000566!2.75e-15!172;CL:0000988!1.34e-13!182;CL:0000791!1.50e-13!18;CL:0000789!1.50e-13!18;CL:0002420!1.50e-13!18;CL:0002419!1.50e-13!18;CL:0000790!1.50e-13!18;CL:0002032!2.58e-13!165;CL:0000837!2.58e-13!165;CL:0000084!5.50e-13!25;CL:0000827!5.50e-13!25;CL:0000945!5.15e-09!24;CL:0000826!5.15e-09!24;CL:0000625!7.38e-09!11;CL:0000236!5.80e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.63e-42;18!CL:0000789;3.63e-42;18!CL:0002419;3.63e-42;18!CL:0000084;1.49e-32;25!CL:0000542;3.48e-32;53!CL:0000625;2.85e-26;11!CL:0000945;4.85e-18;24!CL:0000236;3.81e-16;13!CL:0000624;1.11e-15;6!CL:0000898;5.85e-09;3!CL:0000623;5.14e-08;3!CL:0000226;6.93e-08;3!CL:0000842;6.93e-08;3!CL:0002087;1.19e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.10e-55,52;CL:0000542,9.05e-54,53;CL:0000051,9.05e-54,53;CL:0000791,2.64e-42,18;CL:0000789,2.64e-42,18;CL:0002420,2.64e-42,18;CL:0002419,2.64e-42,18;CL:0000790,2.64e-42,18;CL:0000084,1.18e-32,25;CL:0000827,1.18e-32,25;CL:0000625,2.66e-26,11;CL:0002087,1.30e-25,115;CL:0000738,1.10e-23,136;CL:0002031,6.22e-20,120;CL:0000037,6.99e-19,168;CL:0000945,4.60e-18,24;CL:0000826,4.60e-18,24;CL:0000988,2.68e-17,177;CL:0000624,1.05e-15,6;CL:0000236,6.02e-15,14;CL:0002032,7.50e-15,161;CL:0000837,7.50e-15,161;CL:0000898,6.19e-09,3;CL:0000623,6.18e-08,3;CL:0000825,6.18e-08,3;CL:0000226,7.30e-08,3;CL:0000842,7.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.63e-42;18!CL:0000051;3.48e-32;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-10;15!UBERON:0000179;1.17e-10;15!UBERON:0000463;1.17e-10;15!UBERON:0002390;2.82e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.80e-11,15;UBERON:0000179,9.80e-11,15;UBERON:0000463,9.80e-11,15;UBERON:0002370,8.28e-10,4;UBERON:0005058,8.28e-10,4;UBERON:0009113,8.28e-10,4;UBERON:0003295,8.28e-10,4;UBERON:0005562,8.28e-10,4;UBERON:0003351,1.58e-09,6;UBERON:0001042,8.43e-08,10;UBERON:0009145,8.43e-08,10;UBERON:0006562,5.02e-07,11 | |||
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| |||
|short_description=p3@ZNF101 | |||
}} |
Revision as of 19:37, 11 September 2013
Short description: | p3@ZNF101 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ZNF101_5end |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | -12bp_to_ENST00000415784_5end |
EntrezGene: | ZNF101 |
HGNC: | 12881 |
UniProt: | Q0VDG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.10e-55 | 52 |
lymphocyte | 9.05e-54 | 53 |
common lymphoid progenitor | 9.05e-54 | 53 |
mature alpha-beta T cell | 2.64e-42 | 18 |
alpha-beta T cell | 2.64e-42 | 18 |
immature T cell | 2.64e-42 | 18 |
mature T cell | 2.64e-42 | 18 |
immature alpha-beta T cell | 2.64e-42 | 18 |
T cell | 1.18e-32 | 25 |
pro-T cell | 1.18e-32 | 25 |
CD8-positive, alpha-beta T cell | 2.66e-26 | 11 |
nongranular leukocyte | 1.30e-25 | 115 |
leukocyte | 1.10e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 6.22e-20 | 120 |
hematopoietic stem cell | 6.99e-19 | 168 |
lymphocyte of B lineage | 4.60e-18 | 24 |
pro-B cell | 4.60e-18 | 24 |
hematopoietic cell | 2.68e-17 | 177 |
CD4-positive, alpha-beta T cell | 1.05e-15 | 6 |
B cell | 6.02e-15 | 14 |
hematopoietic oligopotent progenitor cell | 7.50e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-15 | 161 |
naive T cell | 6.19e-09 | 3 |
natural killer cell | 6.18e-08 | 3 |
pro-NK cell | 6.18e-08 | 3 |
single nucleate cell | 7.30e-08 | 3 |
mononuclear cell | 7.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.80e-11 | 15 |
haemolymphatic fluid | 9.80e-11 | 15 |
organism substance | 9.80e-11 | 15 |
thymus | 8.28e-10 | 4 |
hemolymphoid system gland | 8.28e-10 | 4 |
thymic region | 8.28e-10 | 4 |
pharyngeal gland | 8.28e-10 | 4 |
thymus primordium | 8.28e-10 | 4 |
pharyngeal epithelium | 1.58e-09 | 6 |
chordate pharynx | 8.43e-08 | 10 |
pharyngeal region of foregut | 8.43e-08 | 10 |
pharynx | 5.02e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.