FFCP PHASE1:Hg19::chr19:17212998..17213013,+: Difference between revisions
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{{FFCP | 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31,0,0.179650404213174,0,0.244482888365733,1.22068853494722,0,1.81146414231924,0.320568492303233|short_description=p3@MYO9B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7609 | |||
|TSSclassifier=N | |||
|UniProt=Q14788 | |||
|association_with_transcript=-213bp_to_L29149_5end | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_3_at_MYO9B_5end | |||
|id=chr19:17212998..17213013,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.31e-26!76;CL:0002057!1.15e-24!42;CL:0000860!1.26e-23!45;CL:0002194!3.59e-23!63;CL:0000576!3.59e-23!63;CL:0000040!3.59e-23!63;CL:0000559!3.59e-23!63;CL:0002009!6.53e-22!65;CL:0000839!1.06e-20!70;CL:0000557!4.58e-20!71;CL:0000738!8.35e-20!140;CL:0000763!3.67e-19!112;CL:0000049!3.67e-19!112;CL:0002087!2.01e-16!119;CL:0000037!3.34e-16!172;CL:0000566!3.34e-16!172;CL:0002032!5.62e-16!165;CL:0000837!5.62e-16!165;CL:0000988!1.95e-15!182;CL:0002031!6.27e-15!124;CL:0002320!1.95e-12!365;CL:0000134!2.05e-12!358;CL:0000048!2.54e-12!430;CL:0000723!2.93e-12!436;CL:0000034!1.38e-11!444;CL:0000219!2.26e-11!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-32;33!CL:0002057;2.00e-32;33!CL:0000473;1.64e-29;39!CL:0000234;1.64e-29;39!CL:0000576;1.41e-21;48!CL:0000766;4.02e-18;69!CL:0000763;3.27e-09;100!CL:0000738;3.30e-08;136!CL:0002087;1.34e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.58e-41,48;CL:0000234,3.58e-41,48;CL:0000860,5.73e-38,42;CL:0002057,5.73e-38,42;CL:0000766,6.75e-37,72;CL:0002194,1.81e-34,59;CL:0000576,1.81e-34,59;CL:0000040,1.81e-34,59;CL:0000559,1.81e-34,59;CL:0002009,1.04e-32,61;CL:0000839,5.88e-30,66;CL:0000557,3.19e-29,67;CL:0000763,1.60e-27,108;CL:0000049,1.60e-27,108;CL:0000738,2.19e-27,136;CL:0002087,4.55e-23,115;CL:0000037,1.51e-22,168;CL:0002032,4.61e-22,161;CL:0000837,4.61e-22,161;CL:0000988,1.93e-21,177;CL:0002031,4.34e-20,120;CL:0000134,3.59e-13,354;CL:0002320,3.03e-12,361;CL:0000219,3.11e-12,386;CL:0000723,9.65e-11,433;CL:0000048,1.40e-10,427;CL:0000034,6.96e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.89e-27;42!CL:0000049;2.39e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-17!102;UBERON:0003061!1.54e-17!102;UBERON:0002371!2.91e-17!80;UBERON:0002193!3.60e-16!112;UBERON:0001474!3.52e-15!86;UBERON:0004765!3.37e-13!101;UBERON:0001434!3.37e-13!101;UBERON:0002405!2.14e-12!115;UBERON:0002384!4.40e-11!375;UBERON:0002204!1.30e-09!167;UBERON:0003081!2.24e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.37e-26,76;UBERON:0002390,1.61e-24,98;UBERON:0003061,1.61e-24,98;UBERON:0001474,1.27e-22,82;UBERON:0002193,2.86e-20,108;UBERON:0004765,5.84e-19,90;UBERON:0002405,1.56e-18,93;UBERON:0001434,4.24e-17,100;UBERON:0003081,1.12e-13,203;UBERON:0002384,2.39e-11,371;UBERON:0002204,1.56e-10,167;UBERON:0000926,1.39e-09,315;UBERON:0004120,1.39e-09,315;UBERON:0006603,1.39e-09,315 | |||
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| |||
|short_description=p3@MYO9B | |||
}} |
Revision as of 19:16, 11 September 2013
Short description: | p3@MYO9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MYO9B_5end |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | -213bp_to_L29149_5end |
EntrezGene: | MYO9B |
HGNC: | 7609 |
UniProt: | Q14788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.58e-41 | 48 |
phagocyte | 3.58e-41 | 48 |
classical monocyte | 5.73e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-38 | 42 |
myeloid leukocyte | 6.75e-37 | 72 |
monopoietic cell | 1.81e-34 | 59 |
monocyte | 1.81e-34 | 59 |
monoblast | 1.81e-34 | 59 |
promonocyte | 1.81e-34 | 59 |
macrophage dendritic cell progenitor | 1.04e-32 | 61 |
myeloid lineage restricted progenitor cell | 5.88e-30 | 66 |
granulocyte monocyte progenitor cell | 3.19e-29 | 67 |
myeloid cell | 1.60e-27 | 108 |
common myeloid progenitor | 1.60e-27 | 108 |
leukocyte | 2.19e-27 | 136 |
nongranular leukocyte | 4.55e-23 | 115 |
hematopoietic stem cell | 1.51e-22 | 168 |
hematopoietic oligopotent progenitor cell | 4.61e-22 | 161 |
hematopoietic multipotent progenitor cell | 4.61e-22 | 161 |
hematopoietic cell | 1.93e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 4.34e-20 | 120 |
mesenchymal cell | 3.59e-13 | 354 |
connective tissue cell | 3.03e-12 | 361 |
motile cell | 3.11e-12 | 386 |
somatic stem cell | 9.65e-11 | 433 |
multi fate stem cell | 1.40e-10 | 427 |
stem cell | 6.96e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.37e-26 | 76 |
hematopoietic system | 1.61e-24 | 98 |
blood island | 1.61e-24 | 98 |
bone element | 1.27e-22 | 82 |
hemolymphoid system | 2.86e-20 | 108 |
skeletal element | 5.84e-19 | 90 |
immune system | 1.56e-18 | 93 |
skeletal system | 4.24e-17 | 100 |
lateral plate mesoderm | 1.12e-13 | 203 |
connective tissue | 2.39e-11 | 371 |
musculoskeletal system | 1.56e-10 | 167 |
mesoderm | 1.39e-09 | 315 |
mesoderm-derived structure | 1.39e-09 | 315 |
presumptive mesoderm | 1.39e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.