FFCP PHASE1:Hg19::chr19:14530143..14530177,-: Difference between revisions
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{{FFCP | 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3060199592,13.0734853989486,23.4689099842339,16.6655877679817,22.262832389181,27.200879396199,32.605891046043,26.3928764145585,48.0148175006366,11.8505382909179,9.95460740292461,34.4902746645718,22.5870228532717,14.720885483026,11.7939545584709,10.3224621676562,15.0031607584625,36.997668233162,46.4109024169513,18.9436477626897,13.6203828856041,40.6874150056568,15.9462638800167,13.0636224606924,24.5557192903011,59.7349455137617,43.7199318359392,61.9218648548719,51.5986891060237,18.068868208643,35.3216928138156,19.5525721290635,10.1761392209094,71.9219114411431,44.0313911557008,10.5802783107205,11.3310826620684,7.06521476061055,5.6678630530234,9.73766540248623,4.30744364905586,7.56215088665154,8.78297106295567,5.81312324274664,5.71077681036618,26.5980317137779,24.53770245633,12.8400018965175,20.9101455732112,11.441462864015,18.6397180036227,32.8211766491853,9.62692202870493,13.3125345344323,9.37816813479711,18.595375308181,10.6451746381563,12.4199112422318,7.5642094772602,4.68646859168308,8.06078506354618,7.483065602881,11.4864709893826,7.67560873600055,10.9166459245645,54.8718282402016,9.45441964533005,4.82131652290458,5.04425583328236,9.10448406354947,8.19583888864671,12.4183318227694,28.693262901389,6.5165443586219,8.08839822424297,8.15582392179329,28.4847156530363,41.7117757095259,8.9482125849586,3.14231179832004,13.4530638390619,9.13158720509496,16.4104969326152,21.0210742670302,6.50436552007573,44.2438112851634,21.2721808423669,32.3376386482798,7.21540228257228,9.32472738733666,11.6088564423886,12.4426739126537,4.30227358820278,23.1930721431908,25.5640214277473,4.65725755210022,22.681579985861,26.9879555527958,34.3994018031876,8.94843454382339,24.8320091046565,31.4548246454255,7.12171720906684,6.15976841137482,6.95888658802919,10.6856418473011,31.3478881039222,32.2300255761416,27.9462213327286,26.9941136073114,66.2941315974938,29.8906430262014,12.8109102459188,12.6764545092295,43.2691912652601,6.37385636560154,12.7265335434878,6.28187094767825,10.0995776111209,11.8343603723352,8.15650150501521,18.7967835959707,24.236165878065,31.3815229604277,8.57058905307156,12.3513205100492,23.5107204399263,10.9550458236978,9.17458566809082,14.4772978982966,35.3408299312734,7.81902137195519,11.3451179488498,13.225671012885,18.5997509083376,13.8652688589425,16.0071827985802,26.1164499408613,17.8102882300824,27.1134792164475,27.5369840303351,35.0054800897884,42.5473384846332,13.7889146610806,33.0395124231524,58.1482162438907,12.4375415918817,13.3428564661845,7.67642334843531,12.3793504361145,32.036099278659,28.3681444332071,14.2407465477379,8.97424931722125,6.06351566874658,15.8933225964782,8.55583252713203,24.4487952442953,13.9141078461792,9.9798106963804,24.9908034635692,40.9833008170427,3.8614456457388,10.5095486464707,4.69281884806909,9.29034975789785,7.73102738799903,8.65483806441166,18.3159152167834,26.9277533534716|short_description=p1@DDX39A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17821 | |||
|TSSclassifier=S | |||
|UniProt=O00148 | |||
|association_with_transcript=0bp_to_ENST00000242776,uc002myo.2,uc010dzl.2_5end | |||
|description=CAGE_peak_1_at_DDX39A_5end | |||
|id=chr19:14530143..14530177,- | |||
|ontology_enrichment_celltype=CL:0000003!6.19e-33!722;CL:0000012!6.64e-33!682;CL:0000548!6.80e-31!679;CL:0000004!6.80e-31!679;CL:0000255!6.80e-31!679;CL:0000988!3.12e-28!182;CL:0000037!1.07e-26!172;CL:0000566!1.07e-26!172;CL:0002032!8.86e-25!165;CL:0000837!8.86e-25!165;CL:0000144!1.10e-23!625;CL:0000063!4.40e-23!578;CL:0002371!2.89e-21!591;CL:0000219!4.08e-20!390;CL:0002031!1.54e-18!124;CL:0000738!3.00e-17!140;CL:0002087!5.61e-17!119;CL:0000034!6.32e-15!444;CL:0000134!2.33e-14!358;CL:0002320!2.62e-13!365;CL:0000763!4.28e-13!112;CL:0000049!4.28e-13!112;CL:0000723!8.47e-13!436;CL:0000048!4.96e-12!430;CL:0000542!7.70e-12!53;CL:0000051!7.70e-12!53;CL:0000838!1.82e-11!52;CL:0000860!5.51e-09!45;CL:0002057!8.75e-08!42;CL:0000839!1.05e-07!70;CL:0000945!1.08e-07!24;CL:0000826!1.08e-07!24;CL:0000557!1.13e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.27e-08;53!CL:0000945;1.18e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-27,177;CL:0000037,4.84e-26,168;CL:0002032,3.86e-24,161;CL:0000837,3.86e-24,161;CL:0000219,8.73e-19,386;CL:0002031,5.78e-18,120;CL:0000738,1.14e-16,136;CL:0002087,2.06e-16,115;CL:0000034,1.33e-13,441;CL:0000134,2.97e-13,354;CL:0000763,1.48e-12,108;CL:0000049,1.48e-12,108;CL:0002320,3.01e-12,361;CL:0000542,7.70e-12,53;CL:0000051,7.70e-12,53;CL:0000723,1.37e-11,433;CL:0000838,1.82e-11,52;CL:0000048,7.26e-11,427;CL:0000860,8.75e-08,42;CL:0002057,8.75e-08,42;CL:0000945,1.08e-07,24;CL:0000826,1.08e-07,24;CL:0000839,3.20e-07,66;CL:0000557,3.45e-07,67;CL:0000473,8.95e-07,48;CL:0000234,8.95e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;9.27e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!6.13e-15!51;DOID:0060083!6.13e-15!51;DOID:1240!4.39e-13!39;DOID:8692!1.98e-09!31;DOID:162!9.02e-08!235;DOID:14566!5.40e-07!239;DOID:0050686!7.10e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.87e-10;39!DOID:2531;2.85e-09;51!DOID:0060083;2.85e-09;51!DOID:8692;3.87e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.13e-15,51;DOID:0060083,6.13e-15,51;DOID:1240,4.39e-13,39;DOID:8692,1.98e-09,31;DOID:162,9.02e-08,235;DOID:14566,5.40e-07,239;DOID:0050686,7.10e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.70e-12!375;UBERON:0002371!7.44e-08!80;UBERON:0001474!8.78e-08!86;UBERON:0002390!1.11e-07!102;UBERON:0003061!1.11e-07!102;UBERON:0002193!3.61e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@DDX39A | |||
}} |
Revision as of 19:04, 11 September 2013
Short description: | p1@DDX39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DDX39A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000242776, uc002myo.2, uc010dzl.2_5end |
EntrezGene: | DDX39A |
HGNC: | 17821 |
UniProt: | O00148 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.49e-27 | 177 |
hematopoietic stem cell | 4.84e-26 | 168 |
hematopoietic oligopotent progenitor cell | 3.86e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.86e-24 | 161 |
motile cell | 8.73e-19 | 386 |
hematopoietic lineage restricted progenitor cell | 5.78e-18 | 120 |
leukocyte | 1.14e-16 | 136 |
nongranular leukocyte | 2.06e-16 | 115 |
stem cell | 1.33e-13 | 441 |
mesenchymal cell | 2.97e-13 | 354 |
myeloid cell | 1.48e-12 | 108 |
common myeloid progenitor | 1.48e-12 | 108 |
connective tissue cell | 3.01e-12 | 361 |
lymphocyte | 7.70e-12 | 53 |
common lymphoid progenitor | 7.70e-12 | 53 |
somatic stem cell | 1.37e-11 | 433 |
lymphoid lineage restricted progenitor cell | 1.82e-11 | 52 |
multi fate stem cell | 7.26e-11 | 427 |
classical monocyte | 8.75e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.75e-08 | 42 |
lymphocyte of B lineage | 1.08e-07 | 24 |
pro-B cell | 1.08e-07 | 24 |
myeloid lineage restricted progenitor cell | 3.20e-07 | 66 |
granulocyte monocyte progenitor cell | 3.45e-07 | 67 |
defensive cell | 8.95e-07 | 48 |
phagocyte | 8.95e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.79e-11 | 371 |
immune system | 1.69e-07 | 93 |
bone marrow | 2.26e-07 | 76 |
bone element | 2.65e-07 | 82 |
hematopoietic system | 3.26e-07 | 98 |
blood island | 3.26e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.13e-15 | 51 |
immune system cancer | 6.13e-15 | 51 |
leukemia | 4.39e-13 | 39 |
myeloid leukemia | 1.98e-09 | 31 |
cancer | 9.02e-08 | 235 |
disease of cellular proliferation | 5.40e-07 | 239 |
organ system cancer | 7.10e-07 | 137 |
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