FFCP PHASE1:Hg19::chr17:79869342..79869349,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5833|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8756|TSSclassifier=S|UniProt=F5H8B1,Q99447|association_with_transcript=-2bp_to_ENST00000538721,ENST00000538936,NM_001184917,NM_002861,NR_033681,NR_033682_5end|description=CAGE_peak_4_at_PCYT2_5end|id=chr17:79869342..79869349,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002188;9.02e-07;5|ontology_enrichment_celltype_v019_2=CL:0002188,7.71e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3347;7.54e-09;1|ontology_enrichment_disease_v019_2=DOID:3347,8.15e-09,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.522371256399677,0.245733936501509,1.39560233594486,0,0.527533956456907,0.495065411840187,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0.547497700291537,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0.6024118375565,0,0.154934401160603,0.142169232487422,0,0,0,0.434021741431704,0.671746422719773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,0,0.267540828089713,0,0.453237370790265,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0.301150238155546,0.127986611154418,1.24930726552346,0.710331756132051,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0,0,0.351339142772504,1.17881167947941,0.364295288292542,0,0,0.348259474598534,0.398873881556595,0.238490624305342,0,0,0.79504962946682,0,0.347140501607594,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.468642863667593,0,0,0.448346041655403,0.822041490506354,0,0.280901613404497,0.204154171254893,0.737005903870608,0.206651562351531,0,0,0.910161361938026,2.15585442544872,0.673344455816265,0.375355559615893,1.38532057742091,0.438977620880838,0,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.773043412653187,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,0,0.380508304469197,0,0.858486162094873,0,0,0,0,0.503946384596579,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.088048434013226,0.207328115540772,0.432359860250884,0.12624243342638,0.253991577168676,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.22001485746285,0.129271715757778,7.15312891703765,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0.142977993658148,1.08524321078289,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.448340575974109,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0.553107505625109,0.173767228936166,0.391602314925481,1.02943027143257,0,0,0,0.606255142892519,0,1.5119514666484,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0.451199612907412,0,0.784349769176855,0,0.73886140225013,0,0.340187410553031,0.215915916102139,3.08454505380579,0,0.501689773854853,0.509752546090077,0,1.34324852833307,0.219259876645935,0.261435451024901,0,0,0,0,0.27470839445503,0.330037999682352,0,0,0,0,0.616194468458578,0.15350367472613,0.275673144969061,0.429680979473094,0.290033387828457,0.426133137080504,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0.511795582622668,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0.329294892959902,0.379473173765715,0.699869440489966,0.192444225451024,0,0,0,0,0,0.886860307073351,0,0,0,0.569647187174163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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8756 | |||
|TSSclassifier=S | |||
|UniProt=F5H8B1,Q99447 | |||
|association_with_transcript=-2bp_to_ENST00000538721,ENST00000538936,NM_001184917,NM_002861,NR_033681,NR_033682_5end | |||
|description=CAGE_peak_4_at_PCYT2_5end | |||
|id=chr17:79869342..79869349,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;9.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,7.71e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;7.54e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,8.15e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@PCYT2 | |||
}} |
Revision as of 16:29, 11 September 2013
Short description: | p4@PCYT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PCYT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000538721, ENST00000538936, NM_001184917, NM_002861, NR_033681, NR_033682_5end |
EntrezGene: | PCYT2 |
HGNC: | 8756 |
UniProt: | F5H8B1Q99447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 7.71e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 8.15e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.