FFCP PHASE1:Hg19::chr17:74705567..74705587,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:74705567..74705587,+|id=chr17:74705567..74705587,+|ontology_enrichment_celltype=CL:0000055!2.58e-09!180|ontology_enrichment_celltype_v019=CL:0000511;5.97e-08;1!CL:0002625;5.97e-08;1!CL:0002581;5.97e-08;1!CL:0000216;5.97e-08;1|ontology_enrichment_celltype_v019_2=CL:0000511,3.58e-08,1;CL:0002625,3.58e-08,1;CL:0000216,3.58e-08,1;CL:0002581,4.71e-08,1|ontology_enrichment_development_v019=UBERON:0010122;3.10e-15;2!UBERON:0004140;5.97e-08;1!UBERON:0004874;5.97e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.85e-13!365;UBERON:0000468!7.24e-09!659;UBERON:0000483!2.61e-08!309;UBERON:0000119!3.74e-08!312;UBERON:0000481!3.29e-07!347;UBERON:0000153!5.52e-07!129;UBERON:0007811!5.52e-07!129;UBERON:0000467!6.66e-07!625;UBERON:0000033!7.40e-07!123;UBERON:0000480!8.41e-07!626|ontology_enrichment_uberon_v019=UBERON:0005383;5.78e-22;3!UBERON:0005382;5.78e-22;3!UBERON:0000369;1.28e-16;4!UBERON:0002435;1.28e-16;4!UBERON:0000204;1.28e-16;4!UBERON:0009663;3.47e-16;7!UBERON:0001873;3.10e-15;2!UBERON:0002420;1.27e-12;9!UBERON:0000125;1.27e-12;9!UBERON:0007245;1.27e-12;9!UBERON:0002308;1.27e-12;9!UBERON:0010009;1.27e-12;9!UBERON:0010011;1.27e-12;9!UBERON:0000454;1.27e-12;9!UBERON:0001874;1.77e-08;1!UBERON:0001000;5.97e-08;1!UBERON:0000989;5.97e-08;1!UBERON:0000996;5.97e-08;1!UBERON:0002134;5.97e-08;1!UBERON:0001136;5.97e-08;1!UBERON:0001343;5.97e-08;1!UBERON:0008811;5.97e-08;1!UBERON:0005208;5.97e-08;1!UBERON:0004910;5.97e-08;1!UBERON:0004145;5.97e-08;1!UBERON:0005946;5.97e-08;1!UBERON:0004813;5.97e-08;1!UBERON:0005352;5.97e-08;1!UBERON:0005965;5.97e-08;1!UBERON:0002078;5.97e-08;1!UBERON:0005904;1.53e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.02e-22,3;UBERON:0005382,6.02e-22,3;UBERON:0000369,1.33e-16,4;UBERON:0002435,1.33e-16,4;UBERON:0000204,1.33e-16,4;UBERON:0010082,1.33e-16,4;UBERON:0009663,4.57e-16,7;UBERON:0001873,3.22e-15,2;UBERON:0010122,3.22e-15,2;UBERON:0002420,1.57e-12,9;UBERON:0000125,1.57e-12,9;UBERON:0007245,1.57e-12,9;UBERON:0002308,1.57e-12,9;UBERON:0010009,1.57e-12,9;UBERON:0010011,1.57e-12,9;UBERON:0000454,1.57e-12,9;UBERON:0001874,1.77e-08,1;UBERON:0000996,2.90e-08,1;UBERON:0001136,3.58e-08,1;UBERON:0001343,3.58e-08,1;UBERON:0004910,3.58e-08,1;UBERON:0005154,3.58e-08,1;UBERON:0005295,3.58e-08,1;UBERON:0004813,3.58e-08,1;UBERON:0005297,3.58e-08,1;UBERON:0005294,3.58e-08,1;UBERON:0010141,3.58e-08,1;UBERON:0005891,3.58e-08,1;UBERON:0001000,4.11e-08,1;UBERON:0005352,4.11e-08,1;UBERON:0000989,4.40e-08,1;UBERON:0008811,4.40e-08,1;UBERON:0006258,4.40e-08,1;UBERON:0005876,4.40e-08,1;UBERON:0004874,4.40e-08,1;UBERON:0002134,5.05e-08,1;UBERON:0005208,5.05e-08,1;UBERON:0005946,5.05e-08,1;UBERON:0005965,5.05e-08,1;UBERON:0002078,5.05e-08,1;UBERON:0005904,9.97e-08,4|phase1_expression=0.908391896352783,1.2846031433459,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.43917392846563,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,1.85372853138506,0.286836620748814,0,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.421352420106746,0.61246251376468,0.491337269247072,0.206651562351531,0,0.741800787835671,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0.538168907066586,0.213557388818567,0.847727604638247,0.300091096084402,0.412210116953756,1.03056216018252,0.18611685633159,0.675105328965065,0,0.757301322732344,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.370353780634118,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.714889968290738,0,0.823240336780769,0,0.710783897485092,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:74705567..74705587,+ | |||
|id=chr17:74705567..74705587,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.58e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.97e-08;1!CL:0002625;5.97e-08;1!CL:0002581;5.97e-08;1!CL:0000216;5.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.58e-08,1;CL:0002625,3.58e-08,1;CL:0000216,3.58e-08,1;CL:0002581,4.71e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.10e-15;2!UBERON:0004140;5.97e-08;1!UBERON:0004874;5.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.85e-13!365;UBERON:0000468!7.24e-09!659;UBERON:0000483!2.61e-08!309;UBERON:0000119!3.74e-08!312;UBERON:0000481!3.29e-07!347;UBERON:0000153!5.52e-07!129;UBERON:0007811!5.52e-07!129;UBERON:0000467!6.66e-07!625;UBERON:0000033!7.40e-07!123;UBERON:0000480!8.41e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;5.78e-22;3!UBERON:0005382;5.78e-22;3!UBERON:0000369;1.28e-16;4!UBERON:0002435;1.28e-16;4!UBERON:0000204;1.28e-16;4!UBERON:0009663;3.47e-16;7!UBERON:0001873;3.10e-15;2!UBERON:0002420;1.27e-12;9!UBERON:0000125;1.27e-12;9!UBERON:0007245;1.27e-12;9!UBERON:0002308;1.27e-12;9!UBERON:0010009;1.27e-12;9!UBERON:0010011;1.27e-12;9!UBERON:0000454;1.27e-12;9!UBERON:0001874;1.77e-08;1!UBERON:0001000;5.97e-08;1!UBERON:0000989;5.97e-08;1!UBERON:0000996;5.97e-08;1!UBERON:0002134;5.97e-08;1!UBERON:0001136;5.97e-08;1!UBERON:0001343;5.97e-08;1!UBERON:0008811;5.97e-08;1!UBERON:0005208;5.97e-08;1!UBERON:0004910;5.97e-08;1!UBERON:0004145;5.97e-08;1!UBERON:0005946;5.97e-08;1!UBERON:0004813;5.97e-08;1!UBERON:0005352;5.97e-08;1!UBERON:0005965;5.97e-08;1!UBERON:0002078;5.97e-08;1!UBERON:0005904;1.53e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.02e-22,3;UBERON:0005382,6.02e-22,3;UBERON:0000369,1.33e-16,4;UBERON:0002435,1.33e-16,4;UBERON:0000204,1.33e-16,4;UBERON:0010082,1.33e-16,4;UBERON:0009663,4.57e-16,7;UBERON:0001873,3.22e-15,2;UBERON:0010122,3.22e-15,2;UBERON:0002420,1.57e-12,9;UBERON:0000125,1.57e-12,9;UBERON:0007245,1.57e-12,9;UBERON:0002308,1.57e-12,9;UBERON:0010009,1.57e-12,9;UBERON:0010011,1.57e-12,9;UBERON:0000454,1.57e-12,9;UBERON:0001874,1.77e-08,1;UBERON:0000996,2.90e-08,1;UBERON:0001136,3.58e-08,1;UBERON:0001343,3.58e-08,1;UBERON:0004910,3.58e-08,1;UBERON:0005154,3.58e-08,1;UBERON:0005295,3.58e-08,1;UBERON:0004813,3.58e-08,1;UBERON:0005297,3.58e-08,1;UBERON:0005294,3.58e-08,1;UBERON:0010141,3.58e-08,1;UBERON:0005891,3.58e-08,1;UBERON:0001000,4.11e-08,1;UBERON:0005352,4.11e-08,1;UBERON:0000989,4.40e-08,1;UBERON:0008811,4.40e-08,1;UBERON:0006258,4.40e-08,1;UBERON:0005876,4.40e-08,1;UBERON:0004874,4.40e-08,1;UBERON:0002134,5.05e-08,1;UBERON:0005208,5.05e-08,1;UBERON:0005946,5.05e-08,1;UBERON:0005965,5.05e-08,1;UBERON:0002078,5.05e-08,1;UBERON:0005904,9.97e-08,4 | |||
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| |||
|short_description=p@chr17:74705567..74705587,+ | |||
}} |
Revision as of 15:51, 11 September 2013
Short description: | p@chr17:74705567..74705587, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:74705567..74705587, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.58e-08 | 1 |
seminiferous tubule epithelial cell | 3.58e-08 | 1 |
Sertoli cell | 3.58e-08 | 1 |
perirenal preadipocyte | 4.71e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.