FFCP PHASE1:Hg19::chr17:74381452..74381473,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8877|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11240|TSSclassifier=S|UniProt=Q9NYA1,Q53ZR5,Q96GK1|association_with_transcript=163bp_to_ENST00000392496,NM_001142602,uc002jrk.3_5end|coexpression_cluster_id=C0|description=CAGE_peak_5_at_SPHK1_5end|id=chr17:74381452..74381473,+|ontology_enrichment_celltype=CL:0002371!4.45e-26!591;CL:0000144!3.32e-23!625;CL:0000048!4.37e-23!430;CL:0000723!4.51e-23!436;CL:0002057!1.13e-22!42;CL:0000034!3.11e-22!444;CL:0000860!4.62e-20!45;CL:0000012!5.38e-19!682;CL:0000548!1.20e-18!679;CL:0000004!1.20e-18!679;CL:0000255!1.20e-18!679;CL:0000766!1.11e-15!76;CL:0002194!6.36e-15!63;CL:0000576!6.36e-15!63;CL:0000040!6.36e-15!63;CL:0000559!6.36e-15!63;CL:0002009!7.44e-15!65;CL:0000557!9.18e-15!71;CL:0000839!2.36e-14!70;CL:0000134!4.74e-14!358;CL:0000003!3.91e-13!722;CL:0002320!6.52e-13!365;CL:0000219!1.75e-11!390;CL:0000063!2.27e-10!578;CL:0000055!3.17e-09!180;CL:0000680!2.84e-08!57;CL:0000056!2.84e-08!57;CL:0000355!2.84e-08!57;CL:0000359!3.76e-08!32;CL:0000192!8.80e-08!42;CL:0000514!8.80e-08!42;CL:0000187!3.17e-07!54;CL:0000183!5.76e-07!59;CL:0002620!5.99e-07!23;CL:0000393!7.58e-07!60;CL:0000211!7.58e-07!60|ontology_enrichment_celltype_v019=CL:0000860;1.00e-45;33!CL:0002057;1.00e-45;33!CL:0000473;5.73e-30;39!CL:0000234;5.73e-30;39!CL:0000576;2.74e-24;48!CL:0000766;4.31e-15;69!CL:0000569;1.97e-07;4|ontology_enrichment_celltype_v019_2=CL:0000860,1.41e-45,42;CL:0002057,1.41e-45,42;CL:0000473,1.64e-38,48;CL:0000234,1.64e-38,48;CL:0000766,7.57e-30,72;CL:0002194,1.15e-28,59;CL:0000576,1.15e-28,59;CL:0000040,1.15e-28,59;CL:0000559,1.15e-28,59;CL:0002009,2.12e-27,61;CL:0000839,3.20e-26,66;CL:0000557,1.12e-25,67;CL:0000034,1.74e-20,441;CL:0000723,2.03e-20,433;CL:0000048,2.64e-20,427;CL:0000763,3.33e-16,108;CL:0000049,3.33e-16,108;CL:0000134,1.09e-15,354;CL:0002320,5.46e-15,361;CL:0000738,4.80e-14,136;CL:0002087,1.39e-13,115;CL:0000219,3.80e-13,386;CL:0002031,1.25e-11,120;CL:0000037,2.73e-09,168;CL:0002032,9.38e-09,161;CL:0000837,9.38e-09,161;CL:0000988,2.69e-08,177;CL:0000569,2.98e-07,4;CL:0000011,2.98e-07,4|ontology_enrichment_development_v019=CL:0002057;9.63e-34;42!CL:0000011;1.97e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;8.44e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,9.54e-07,14|ontology_enrichment_uberon=UBERON:0002204!7.66e-19!167;UBERON:0002371!3.61e-16!80;UBERON:0001474!2.26e-14!86;UBERON:0003081!1.41e-13!216;UBERON:0004765!6.86e-13!101;UBERON:0001434!6.86e-13!101;UBERON:0001637!6.38e-12!42;UBERON:0003509!6.38e-12!42;UBERON:0004572!6.38e-12!42;UBERON:0002384!1.05e-11!375;UBERON:0002390!7.43e-11!102;UBERON:0003061!7.43e-11!102;UBERON:0000486!1.64e-10!82;UBERON:0004290!5.25e-10!70;UBERON:0002193!7.86e-10!112;UBERON:0004573!2.49e-09!33;UBERON:0004571!2.49e-09!33;UBERON:0000914!3.04e-09!83;UBERON:0002329!3.04e-09!83;UBERON:0003077!3.04e-09!83;UBERON:0003059!3.04e-09!83;UBERON:0007282!3.04e-09!83;UBERON:0009618!3.04e-09!83;UBERON:0007285!3.04e-09!83;UBERON:0000926!4.05e-08!448;UBERON:0004120!4.05e-08!448;UBERON:0006603!4.05e-08!448;UBERON:0002405!4.23e-08!115;UBERON:0002199!1.78e-07!45;UBERON:0002416!1.78e-07!45;UBERON:0001981!2.06e-07!60;UBERON:0007500!2.06e-07!60;UBERON:0004537!2.06e-07!60;UBERON:0006965!2.06e-07!60;UBERON:0001134!5.01e-07!61;UBERON:0002036!5.01e-07!61;UBERON:0003082!5.01e-07!61|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-26,76;UBERON:0001474,3.21e-23,82;UBERON:0002390,3.32e-20,98;UBERON:0003061,3.32e-20,98;UBERON:0004765,3.41e-20,90;UBERON:0002405,3.38e-19,93;UBERON:0003081,2.00e-18,203;UBERON:0002204,2.11e-18,167;UBERON:0001434,3.63e-18,100;UBERON:0002193,2.67e-17,108;UBERON:0000926,1.90e-16,315;UBERON:0004120,1.90e-16,315;UBERON:0006603,1.90e-16,315;UBERON:0002384,4.90e-14,371|phase1_expression=1.09007027562334,0.428201047781966,0.563817616383885,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,2.09340350391728,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,1.18009283054671,1.15148819429164,3.8704030829019,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,32.6857291033808,24.065333696417,14.7567392086779,0,0,0,1.59938062657521,3.02300754951048,2.18325655069035,7.43772918098191,13.5685403047203,17.3435567701258,5.75384784644301,7.42866048934392,11.5876292645407,22.7532149286168,29.692295444856,78.5473622247182,3.76484679085209,6.5497476013883,5.39336362668203,26.9353825286394,31.4510446534572,35.1635419189473,0.989553900560148,5.78444607102732,2.98357325372886,40.9195026466303,39.1495805036886,38.6149794377257,7.28621129244555,11.9941071236646,10.8594422352558,23.6105806027014,41.2470952306072,47.1528957286918,0,0.425208599930087,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,8.96813700770458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0.364295288292542,0,0.32454739365468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037,0,0,0,0.591660003652827,0.681707238073262,0,0.9164274741762,1.86123831398592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p5@SPHK1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11240 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYA1,Q53ZR5,Q96GK1 | |||
|association_with_transcript=163bp_to_ENST00000392496,NM_001142602,uc002jrk.3_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_SPHK1_5end | |||
|id=chr17:74381452..74381473,+ | |||
|ontology_enrichment_celltype=CL:0002371!4.45e-26!591;CL:0000144!3.32e-23!625;CL:0000048!4.37e-23!430;CL:0000723!4.51e-23!436;CL:0002057!1.13e-22!42;CL:0000034!3.11e-22!444;CL:0000860!4.62e-20!45;CL:0000012!5.38e-19!682;CL:0000548!1.20e-18!679;CL:0000004!1.20e-18!679;CL:0000255!1.20e-18!679;CL:0000766!1.11e-15!76;CL:0002194!6.36e-15!63;CL:0000576!6.36e-15!63;CL:0000040!6.36e-15!63;CL:0000559!6.36e-15!63;CL:0002009!7.44e-15!65;CL:0000557!9.18e-15!71;CL:0000839!2.36e-14!70;CL:0000134!4.74e-14!358;CL:0000003!3.91e-13!722;CL:0002320!6.52e-13!365;CL:0000219!1.75e-11!390;CL:0000063!2.27e-10!578;CL:0000055!3.17e-09!180;CL:0000680!2.84e-08!57;CL:0000056!2.84e-08!57;CL:0000355!2.84e-08!57;CL:0000359!3.76e-08!32;CL:0000192!8.80e-08!42;CL:0000514!8.80e-08!42;CL:0000187!3.17e-07!54;CL:0000183!5.76e-07!59;CL:0002620!5.99e-07!23;CL:0000393!7.58e-07!60;CL:0000211!7.58e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-45;33!CL:0002057;1.00e-45;33!CL:0000473;5.73e-30;39!CL:0000234;5.73e-30;39!CL:0000576;2.74e-24;48!CL:0000766;4.31e-15;69!CL:0000569;1.97e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.41e-45,42;CL:0002057,1.41e-45,42;CL:0000473,1.64e-38,48;CL:0000234,1.64e-38,48;CL:0000766,7.57e-30,72;CL:0002194,1.15e-28,59;CL:0000576,1.15e-28,59;CL:0000040,1.15e-28,59;CL:0000559,1.15e-28,59;CL:0002009,2.12e-27,61;CL:0000839,3.20e-26,66;CL:0000557,1.12e-25,67;CL:0000034,1.74e-20,441;CL:0000723,2.03e-20,433;CL:0000048,2.64e-20,427;CL:0000763,3.33e-16,108;CL:0000049,3.33e-16,108;CL:0000134,1.09e-15,354;CL:0002320,5.46e-15,361;CL:0000738,4.80e-14,136;CL:0002087,1.39e-13,115;CL:0000219,3.80e-13,386;CL:0002031,1.25e-11,120;CL:0000037,2.73e-09,168;CL:0002032,9.38e-09,161;CL:0000837,9.38e-09,161;CL:0000988,2.69e-08,177;CL:0000569,2.98e-07,4;CL:0000011,2.98e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;9.63e-34;42!CL:0000011;1.97e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.44e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.54e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!7.66e-19!167;UBERON:0002371!3.61e-16!80;UBERON:0001474!2.26e-14!86;UBERON:0003081!1.41e-13!216;UBERON:0004765!6.86e-13!101;UBERON:0001434!6.86e-13!101;UBERON:0001637!6.38e-12!42;UBERON:0003509!6.38e-12!42;UBERON:0004572!6.38e-12!42;UBERON:0002384!1.05e-11!375;UBERON:0002390!7.43e-11!102;UBERON:0003061!7.43e-11!102;UBERON:0000486!1.64e-10!82;UBERON:0004290!5.25e-10!70;UBERON:0002193!7.86e-10!112;UBERON:0004573!2.49e-09!33;UBERON:0004571!2.49e-09!33;UBERON:0000914!3.04e-09!83;UBERON:0002329!3.04e-09!83;UBERON:0003077!3.04e-09!83;UBERON:0003059!3.04e-09!83;UBERON:0007282!3.04e-09!83;UBERON:0009618!3.04e-09!83;UBERON:0007285!3.04e-09!83;UBERON:0000926!4.05e-08!448;UBERON:0004120!4.05e-08!448;UBERON:0006603!4.05e-08!448;UBERON:0002405!4.23e-08!115;UBERON:0002199!1.78e-07!45;UBERON:0002416!1.78e-07!45;UBERON:0001981!2.06e-07!60;UBERON:0007500!2.06e-07!60;UBERON:0004537!2.06e-07!60;UBERON:0006965!2.06e-07!60;UBERON:0001134!5.01e-07!61;UBERON:0002036!5.01e-07!61;UBERON:0003082!5.01e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-26,76;UBERON:0001474,3.21e-23,82;UBERON:0002390,3.32e-20,98;UBERON:0003061,3.32e-20,98;UBERON:0004765,3.41e-20,90;UBERON:0002405,3.38e-19,93;UBERON:0003081,2.00e-18,203;UBERON:0002204,2.11e-18,167;UBERON:0001434,3.63e-18,100;UBERON:0002193,2.67e-17,108;UBERON:0000926,1.90e-16,315;UBERON:0004120,1.90e-16,315;UBERON:0006603,1.90e-16,315;UBERON:0002384,4.90e-14,371 | |||
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| |||
|short_description=p5@SPHK1 | |||
}} |
Revision as of 15:47, 11 September 2013
Short description: | p5@SPHK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SPHK1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 163bp_to_ENST00000392496, NM_001142602, uc002jrk.3_5end |
EntrezGene: | SPHK1 |
HGNC: | 11240 |
UniProt: | Q9NYA1Q53ZR5Q96GK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.41e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-45 | 42 |
defensive cell | 1.64e-38 | 48 |
phagocyte | 1.64e-38 | 48 |
myeloid leukocyte | 7.57e-30 | 72 |
monopoietic cell | 1.15e-28 | 59 |
monocyte | 1.15e-28 | 59 |
monoblast | 1.15e-28 | 59 |
promonocyte | 1.15e-28 | 59 |
macrophage dendritic cell progenitor | 2.12e-27 | 61 |
myeloid lineage restricted progenitor cell | 3.20e-26 | 66 |
granulocyte monocyte progenitor cell | 1.12e-25 | 67 |
stem cell | 1.74e-20 | 441 |
somatic stem cell | 2.03e-20 | 433 |
multi fate stem cell | 2.64e-20 | 427 |
myeloid cell | 3.33e-16 | 108 |
common myeloid progenitor | 3.33e-16 | 108 |
mesenchymal cell | 1.09e-15 | 354 |
connective tissue cell | 5.46e-15 | 361 |
leukocyte | 4.80e-14 | 136 |
nongranular leukocyte | 1.39e-13 | 115 |
motile cell | 3.80e-13 | 386 |
hematopoietic lineage restricted progenitor cell | 1.25e-11 | 120 |
hematopoietic stem cell | 2.73e-09 | 168 |
hematopoietic oligopotent progenitor cell | 9.38e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.38e-09 | 161 |
hematopoietic cell | 2.69e-08 | 177 |
cardiac mesenchymal cell | 2.98e-07 | 4 |
migratory trunk neural crest cell | 2.98e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-26 | 76 |
bone element | 3.21e-23 | 82 |
hematopoietic system | 3.32e-20 | 98 |
blood island | 3.32e-20 | 98 |
skeletal element | 3.41e-20 | 90 |
immune system | 3.38e-19 | 93 |
lateral plate mesoderm | 2.00e-18 | 203 |
musculoskeletal system | 2.11e-18 | 167 |
skeletal system | 3.63e-18 | 100 |
hemolymphoid system | 2.67e-17 | 108 |
mesoderm | 1.90e-16 | 315 |
mesoderm-derived structure | 1.90e-16 | 315 |
presumptive mesoderm | 1.90e-16 | 315 |
connective tissue | 4.90e-14 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.54e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.