FFCP PHASE1:Hg19::chr17:48611912..48611919,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55040|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18235|TSSclassifier=S|UniProt=D6RFG3,D6RBR6|association_with_transcript=0bp_to_ENST00000507467,ENST00000511414,ENST00000515126_5end|coexpression_cluster_id=C1217|description=CAGE_peak_7_at_EPN3_5end|id=chr17:48611912..48611919,+|ontology_enrichment_celltype=CL:0002076!2.82e-18!43;CL:0002368!2.42e-14!13;CL:0002327!4.24e-12!4;CL:0000223!4.64e-12!59;CL:0000066!5.78e-12!254;CL:0002159!2.87e-11!13;CL:0002328!1.15e-10!3;CL:0002621!2.75e-10!3;CL:0002166!3.40e-10!3;CL:0002202!9.11e-09!9;CL:0002632!9.11e-09!9|ontology_enrichment_celltype_v019=CL:0002328;2.64e-38;3!CL:0002202;9.07e-29;9!CL:0002632;9.07e-29;9!CL:0002368;3.43e-20;13!CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0000362;1.31e-13;9!CL:0000307;9.90e-11;3!CL:0002621;9.90e-11;3!CL:0002159;4.21e-09;14!CL:0002327;1.70e-08;4!CL:0002076;4.15e-08;42!CL:0000312;5.08e-07;5!CL:0000622;6.04e-07;5!CL:0000082;6.57e-07;19|ontology_enrichment_celltype_v019_2=CL:0002328,1.49e-38,3;CL:0002202,7.50e-29,9;CL:0002632,7.50e-29,9;CL:0002368,3.01e-20,13;CL:0000317,2.05e-15,2;CL:1000448,2.05e-15,2;CL:0002308,2.05e-15,2;CL:0002140,2.05e-15,2;CL:0000362,1.31e-13,9;CL:0002076,3.06e-11,42;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0002621,1.20e-10,3;CL:0002159,4.21e-09,14;CL:0002327,1.70e-08,4;CL:0000223,2.88e-08,58;CL:0000312,5.08e-07,5;CL:0000082,6.01e-07,19;CL:0000622,6.04e-07,5|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001911!4.24e-12!4;UBERON:0005333!4.24e-12!4;UBERON:0008425!4.24e-12!4;UBERON:0005311!4.24e-12!4;UBERON:0004815!1.15e-10!3;UBERON:0002031!1.15e-10!3;UBERON:0004119!1.72e-10!169;UBERON:0000925!1.72e-10!169;UBERON:0006595!1.72e-10!169;UBERON:0001949!2.75e-10!3;UBERON:0001004!4.73e-09!72;UBERON:0003100!5.21e-09!41;UBERON:0002185!4.48e-08!4;UBERON:0000065!7.47e-08!53;UBERON:0001708!9.93e-08!4;UBERON:0001704!9.93e-08!4;UBERON:0007196!1.71e-07!14;UBERON:0001558!1.71e-07!14;UBERON:0001007!6.14e-07!155;UBERON:0001555!6.14e-07!155;UBERON:0007026!6.14e-07!155;UBERON:0002294!9.50e-07!7;UBERON:0001173!9.50e-07!7;UBERON:0004912!9.50e-07!7|ontology_enrichment_uberon_v019=UBERON:0004815;2.64e-38;3!UBERON:0002031;2.64e-38;3!UBERON:0002185;1.81e-23;5!UBERON:0007196;1.31e-17;15!UBERON:0001558;1.31e-17;15!UBERON:0000485;4.36e-17;7!UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0004807;2.96e-12;22!UBERON:0001949;9.90e-11;3!UBERON:0010371;9.29e-09;31!UBERON:0005178;1.00e-08;34!UBERON:0002224;1.00e-08;34!UBERON:0001003;1.47e-08;15!UBERON:0007376;1.47e-08;15!UBERON:0001911;1.70e-08;4!UBERON:0000072;1.48e-07;37!UBERON:0005181;2.23e-07;35!UBERON:0004802;6.57e-07;19!UBERON:0000115;6.57e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.49e-38,3;UBERON:0002031,1.49e-38,3;UBERON:0002185,1.28e-23,5;UBERON:0007196,1.17e-17,15;UBERON:0001558,1.17e-17,15;UBERON:0002419,2.05e-15,2;UBERON:0007771,2.05e-15,2;UBERON:0003297,2.05e-15,2;UBERON:0001821,2.05e-15,2;UBERON:0003487,2.05e-15,2;UBERON:0001820,2.05e-15,2;UBERON:0005089,2.05e-15,2;UBERON:0005088,2.05e-15,2;UBERON:0000485,1.31e-13,9;UBERON:0001949,1.20e-10,3;UBERON:0004807,8.55e-10,28;UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15;UBERON:0001911,1.70e-08,4;UBERON:0005333,1.70e-08,4;UBERON:0008425,1.70e-08,4;UBERON:0005311,1.70e-08,4;UBERON:0005178,3.40e-08,34;UBERON:0002224,3.40e-08,34;UBERON:0005181,5.59e-08,35;UBERON:0005153,1.25e-07,37;UBERON:0008947,2.13e-07,38;UBERON:0003258,2.13e-07,38;UBERON:0004802,6.01e-07,19;UBERON:0000115,6.01e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.8072355126695,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,2.11110842064425,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.425325291727159,0.179117045405697,0.290633938513962,7.28427090413901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.09208098893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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18235 | |||
|TSSclassifier=S | |||
|UniProt=D6RFG3,D6RBR6 | |||
|association_with_transcript=0bp_to_ENST00000507467,ENST00000511414,ENST00000515126_5end | |||
|coexpression_cluster_id=C1217 | |||
|description=CAGE_peak_7_at_EPN3_5end | |||
|id=chr17:48611912..48611919,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.82e-18!43;CL:0002368!2.42e-14!13;CL:0002327!4.24e-12!4;CL:0000223!4.64e-12!59;CL:0000066!5.78e-12!254;CL:0002159!2.87e-11!13;CL:0002328!1.15e-10!3;CL:0002621!2.75e-10!3;CL:0002166!3.40e-10!3;CL:0002202!9.11e-09!9;CL:0002632!9.11e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0002328;2.64e-38;3!CL:0002202;9.07e-29;9!CL:0002632;9.07e-29;9!CL:0002368;3.43e-20;13!CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0000362;1.31e-13;9!CL:0000307;9.90e-11;3!CL:0002621;9.90e-11;3!CL:0002159;4.21e-09;14!CL:0002327;1.70e-08;4!CL:0002076;4.15e-08;42!CL:0000312;5.08e-07;5!CL:0000622;6.04e-07;5!CL:0000082;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.49e-38,3;CL:0002202,7.50e-29,9;CL:0002632,7.50e-29,9;CL:0002368,3.01e-20,13;CL:0000317,2.05e-15,2;CL:1000448,2.05e-15,2;CL:0002308,2.05e-15,2;CL:0002140,2.05e-15,2;CL:0000362,1.31e-13,9;CL:0002076,3.06e-11,42;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0002621,1.20e-10,3;CL:0002159,4.21e-09,14;CL:0002327,1.70e-08,4;CL:0000223,2.88e-08,58;CL:0000312,5.08e-07,5;CL:0000082,6.01e-07,19;CL:0000622,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!4.24e-12!4;UBERON:0005333!4.24e-12!4;UBERON:0008425!4.24e-12!4;UBERON:0005311!4.24e-12!4;UBERON:0004815!1.15e-10!3;UBERON:0002031!1.15e-10!3;UBERON:0004119!1.72e-10!169;UBERON:0000925!1.72e-10!169;UBERON:0006595!1.72e-10!169;UBERON:0001949!2.75e-10!3;UBERON:0001004!4.73e-09!72;UBERON:0003100!5.21e-09!41;UBERON:0002185!4.48e-08!4;UBERON:0000065!7.47e-08!53;UBERON:0001708!9.93e-08!4;UBERON:0001704!9.93e-08!4;UBERON:0007196!1.71e-07!14;UBERON:0001558!1.71e-07!14;UBERON:0001007!6.14e-07!155;UBERON:0001555!6.14e-07!155;UBERON:0007026!6.14e-07!155;UBERON:0002294!9.50e-07!7;UBERON:0001173!9.50e-07!7;UBERON:0004912!9.50e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.64e-38;3!UBERON:0002031;2.64e-38;3!UBERON:0002185;1.81e-23;5!UBERON:0007196;1.31e-17;15!UBERON:0001558;1.31e-17;15!UBERON:0000485;4.36e-17;7!UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0004807;2.96e-12;22!UBERON:0001949;9.90e-11;3!UBERON:0010371;9.29e-09;31!UBERON:0005178;1.00e-08;34!UBERON:0002224;1.00e-08;34!UBERON:0001003;1.47e-08;15!UBERON:0007376;1.47e-08;15!UBERON:0001911;1.70e-08;4!UBERON:0000072;1.48e-07;37!UBERON:0005181;2.23e-07;35!UBERON:0004802;6.57e-07;19!UBERON:0000115;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.49e-38,3;UBERON:0002031,1.49e-38,3;UBERON:0002185,1.28e-23,5;UBERON:0007196,1.17e-17,15;UBERON:0001558,1.17e-17,15;UBERON:0002419,2.05e-15,2;UBERON:0007771,2.05e-15,2;UBERON:0003297,2.05e-15,2;UBERON:0001821,2.05e-15,2;UBERON:0003487,2.05e-15,2;UBERON:0001820,2.05e-15,2;UBERON:0005089,2.05e-15,2;UBERON:0005088,2.05e-15,2;UBERON:0000485,1.31e-13,9;UBERON:0001949,1.20e-10,3;UBERON:0004807,8.55e-10,28;UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15;UBERON:0001911,1.70e-08,4;UBERON:0005333,1.70e-08,4;UBERON:0008425,1.70e-08,4;UBERON:0005311,1.70e-08,4;UBERON:0005178,3.40e-08,34;UBERON:0002224,3.40e-08,34;UBERON:0005181,5.59e-08,35;UBERON:0005153,1.25e-07,37;UBERON:0008947,2.13e-07,38;UBERON:0003258,2.13e-07,38;UBERON:0004802,6.01e-07,19;UBERON:0000115,6.01e-07,19 | |||
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|short_description=p7@EPN3 | |||
}} |
Revision as of 14:31, 11 September 2013
Short description: | p7@EPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_EPN3_5end |
Coexpression cluster: | C1217_Mammary_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Gingival_Sebocyte |
Association with transcript: | 0bp_to_ENST00000507467, ENST00000511414, ENST00000515126_5end |
EntrezGene: | EPN3 |
HGNC: | 18235 |
UniProt: | D6RFG3D6RBR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.49e-38 | 3 |
epithelial cell of tracheobronchial tree | 7.50e-29 | 9 |
epithelial cell of lower respiratory tract | 7.50e-29 | 9 |
respiratory epithelial cell | 3.01e-20 | 13 |
sebum secreting cell | 2.05e-15 | 2 |
epithelial cell of sweat gland | 2.05e-15 | 2 |
epithelial cell of skin gland | 2.05e-15 | 2 |
acinar cell of sebaceous gland | 2.05e-15 | 2 |
epidermal cell | 1.31e-13 | 9 |
endo-epithelial cell | 3.06e-11 | 42 |
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
gingival epithelial cell | 1.20e-10 | 3 |
general ecto-epithelial cell | 4.21e-09 | 14 |
mammary gland epithelial cell | 1.70e-08 | 4 |
endodermal cell | 2.88e-08 | 58 |
keratinocyte | 5.08e-07 | 5 |
epithelial cell of lung | 6.01e-07 | 19 |
acinar cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.49e-38 | 3 |
epithelium of bronchus | 1.49e-38 | 3 |
bronchus | 1.28e-23 | 5 |
tracheobronchial tree | 1.17e-17 | 15 |
lower respiratory tract | 1.17e-17 | 15 |
skin gland | 2.05e-15 | 2 |
epidermis gland | 2.05e-15 | 2 |
gland of integumental system | 2.05e-15 | 2 |
sebaceous gland | 2.05e-15 | 2 |
skin sebaceous gland | 2.05e-15 | 2 |
sweat gland | 2.05e-15 | 2 |
sweat gland placode | 2.05e-15 | 2 |
sebaceous gland placode | 2.05e-15 | 2 |
simple columnar epithelium | 1.31e-13 | 9 |
gingival epithelium | 1.20e-10 | 3 |
respiratory system epithelium | 8.55e-10 | 28 |
skin epidermis | 1.47e-08 | 15 |
outer epithelium | 1.47e-08 | 15 |
enveloping layer of ectoderm | 1.47e-08 | 15 |
mammary gland | 1.70e-08 | 4 |
mammary bud | 1.70e-08 | 4 |
mammary ridge | 1.70e-08 | 4 |
mammary placode | 1.70e-08 | 4 |
thoracic cavity element | 3.40e-08 | 34 |
thoracic cavity | 3.40e-08 | 34 |
thoracic segment organ | 5.59e-08 | 35 |
epithelial bud | 1.25e-07 | 37 |
respiratory primordium | 2.13e-07 | 38 |
endoderm of foregut | 2.13e-07 | 38 |
respiratory tract epithelium | 6.01e-07 | 19 |
lung epithelium | 6.01e-07 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.