FFCP PHASE1:Hg19::chr17:46671154..46671167,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3215|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5116|TSSclassifier=S|UniProt=P09067|association_with_transcript=-51bp_to_NM_002147,uc002inr.2_5end|description=CAGE_peak_4_at_HOXB5_5end|id=chr17:46671154..46671167,-|ontology_enrichment_celltype=CL:1000497!5.23e-08!18;CL:0002518!5.23e-08!18;CL:0002334!1.10e-07!12|ontology_enrichment_celltype_v019=CL:0002600;2.08e-21;2!CL:0002598;3.46e-21;2!CL:0000192;6.13e-07;43|ontology_enrichment_celltype_v019_2=CL:0002598,2.08e-21,2;CL:0002600,2.31e-21,2;CL:0000192,4.22e-08,43;CL:0000514,4.22e-08,43|ontology_enrichment_development_v019=CL:0000514;6.13e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!6.30e-09!32;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0000353!3.83e-07!17;UBERON:0006555!5.39e-07!17;UBERON:0005103!5.39e-07!17;UBERON:0000083!5.39e-07!17;UBERON:0009201!5.39e-07!17;UBERON:0004819!5.39e-07!17;UBERON:0006553!5.39e-07!17;UBERON:0003074!5.39e-07!17;UBERON:0003060!5.39e-07!17;UBERON:0005177!6.90e-07!107;UBERON:0002113!9.85e-07!27;UBERON:0003918!9.85e-07!27;UBERON:0005095!9.85e-07!27;UBERON:0007687!9.85e-07!27|ontology_enrichment_uberon_v019=UBERON:0007196;4.45e-11;15!UBERON:0001558;4.45e-11;15!UBERON:0005181;1.04e-09;35!UBERON:0005178;1.48e-09;34!UBERON:0002224;1.48e-09;34!UBERON:0002185;4.87e-09;5!UBERON:0000072;6.26e-08;37!UBERON:0002298;1.17e-07;6!UBERON:0003126;9.38e-07;7!UBERON:0001005;9.38e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007196,4.01e-11,15;UBERON:0001558,4.01e-11,15;UBERON:0005178,2.68e-10,34;UBERON:0002224,2.68e-10,34;UBERON:0005181,5.44e-10,35;UBERON:0002185,3.98e-09,5;UBERON:0002298,1.21e-07,6;UBERON:0007503,2.50e-07,78;UBERON:0000072,2.51e-07,47;UBERON:0005177,7.69e-07,101;UBERON:0005256,8.40e-07,122;UBERON:0003126,9.65e-07,7;UBERON:0001005,9.65e-07,7|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.982935746006035,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.842704840213491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.574890092096664,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0.616194468458578,0,0,0,0,0,0,0,0,0,0,2.32422774648643,1.5740617341532,0,0,0,0,0,0,0,0.949138274156178,0,4.09436466098134,1.71175595213568,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,2.31510213706675,2.62357900818653,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0.333926115068718,0,0,0,0.276283915531148,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,1.13843818411917,0.416024019039416,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0.343609788497747,0.857974989309823,0.14405479798815,0.248505071130865,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,1.16160370171347,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,3.41530216177609,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,1.22345519358297,0,0.118193840883968,0,0.078493092850514,0,0,5.47895232305697,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,2.80727356154527,0.198950775161368,0.118920090777569,0,0,1.81155412280008,0.0771741581079447,1.09279780251979,0.470317296361523,0,0.942706188406504,0.785233868459781,0.891139200981258,0.8453114551668,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@HOXB5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3215 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5116 | |||
|TSSclassifier=S | |||
|UniProt=P09067 | |||
|association_with_transcript=-51bp_to_NM_002147,uc002inr.2_5end | |||
|description=CAGE_peak_4_at_HOXB5_5end | |||
|id=chr17:46671154..46671167,- | |||
|ontology_enrichment_celltype=CL:1000497!5.23e-08!18;CL:0002518!5.23e-08!18;CL:0002334!1.10e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002600;2.08e-21;2!CL:0002598;3.46e-21;2!CL:0000192;6.13e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002598,2.08e-21,2;CL:0002600,2.31e-21,2;CL:0000192,4.22e-08,43;CL:0000514,4.22e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;6.13e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!6.30e-09!32;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0000353!3.83e-07!17;UBERON:0006555!5.39e-07!17;UBERON:0005103!5.39e-07!17;UBERON:0000083!5.39e-07!17;UBERON:0009201!5.39e-07!17;UBERON:0004819!5.39e-07!17;UBERON:0006553!5.39e-07!17;UBERON:0003074!5.39e-07!17;UBERON:0003060!5.39e-07!17;UBERON:0005177!6.90e-07!107;UBERON:0002113!9.85e-07!27;UBERON:0003918!9.85e-07!27;UBERON:0005095!9.85e-07!27;UBERON:0007687!9.85e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.45e-11;15!UBERON:0001558;4.45e-11;15!UBERON:0005181;1.04e-09;35!UBERON:0005178;1.48e-09;34!UBERON:0002224;1.48e-09;34!UBERON:0002185;4.87e-09;5!UBERON:0000072;6.26e-08;37!UBERON:0002298;1.17e-07;6!UBERON:0003126;9.38e-07;7!UBERON:0001005;9.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,4.01e-11,15;UBERON:0001558,4.01e-11,15;UBERON:0005178,2.68e-10,34;UBERON:0002224,2.68e-10,34;UBERON:0005181,5.44e-10,35;UBERON:0002185,3.98e-09,5;UBERON:0002298,1.21e-07,6;UBERON:0007503,2.50e-07,78;UBERON:0000072,2.51e-07,47;UBERON:0005177,7.69e-07,101;UBERON:0005256,8.40e-07,122;UBERON:0003126,9.65e-07,7;UBERON:0001005,9.65e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.982935746006035,0,0,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.842704840213491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.574890092096664,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0.616194468458578,0,0,0,0,0,0,0,0,0,0,2.32422774648643,1.5740617341532,0,0,0,0,0,0,0,0.949138274156178,0,4.09436466098134,1.71175595213568,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,2.31510213706675,2.62357900818653,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0,0,0,0,0,0.333926115068718,0,0,0,0.276283915531148,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,1.13843818411917,0.416024019039416,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0.343609788497747,0.857974989309823,0.14405479798815,0.248505071130865,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,1.16160370171347,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,3.41530216177609,0,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,1.22345519358297,0,0.118193840883968,0,0.078493092850514,0,0,5.47895232305697,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,2.80727356154527,0.198950775161368,0.118920090777569,0,0,1.81155412280008,0.0771741581079447,1.09279780251979,0.470317296361523,0,0.942706188406504,0.785233868459781,0.891139200981258,0.8453114551668,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@HOXB5 | |||
}} |
Revision as of 14:15, 11 September 2013
Short description: | p4@HOXB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HOXB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -51bp_to_NM_002147, uc002inr.2_5end |
EntrezGene: | HOXB5 |
HGNC: | 5116 |
UniProt: | P09067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 2.08e-21 | 2 |
smooth muscle cell of trachea | 2.31e-21 | 2 |
smooth muscle cell | 4.22e-08 | 43 |
smooth muscle myoblast | 4.22e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 4.01e-11 | 15 |
lower respiratory tract | 4.01e-11 | 15 |
thoracic cavity element | 2.68e-10 | 34 |
thoracic cavity | 2.68e-10 | 34 |
thoracic segment organ | 5.44e-10 | 35 |
bronchus | 3.98e-09 | 5 |
brainstem | 1.21e-07 | 6 |
epithelial vesicle | 2.50e-07 | 78 |
segment of respiratory tract | 2.51e-07 | 47 |
trunk region element | 7.69e-07 | 101 |
trunk mesenchyme | 8.40e-07 | 122 |
trachea | 9.65e-07 | 7 |
respiratory airway | 9.65e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.