FFCP PHASE1:Hg19::chr17:38706154..38706158,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:38706154..38706158,+|id=chr17:38706154..38706158,+|ontology_enrichment_celltype=CL:0000569!1.99e-15!4;CL:0000011!1.99e-15!4;CL:0002540!1.66e-09!6;CL:0002602!1.48e-08!2;CL:0002195!2.92e-08!2;CL:0002571!2.92e-08!2;CL:0002334!3.35e-07!12|ontology_enrichment_celltype_v019=CL:0000569;3.88e-23;4!CL:0002195;2.45e-12;2!CL:0002571;2.45e-12;2!CL:0002602;2.45e-12;2!CL:0002580;1.17e-08;3|ontology_enrichment_celltype_v019_2=CL:0000569,3.29e-23,4;CL:0000011,3.29e-23,4;CL:0002602,2.32e-12,2;CL:0002195,3.24e-12,2;CL:0002571,3.24e-12,2;CL:0002580,1.30e-08,3|ontology_enrichment_development_v019=UBERON:0003099;2.93e-23;1!UBERON:0003852;2.93e-23;1!CL:0000011;3.88e-23;4!UBERON:0005062;8.37e-07;4!UBERON:0007284;8.37e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009568!1.48e-08!2;UBERON:0002216!1.48e-08!2;UBERON:0002209!1.48e-08!2;UBERON:0002213!1.48e-08!2;UBERON:0004267!1.48e-08!2;UBERON:0006444!1.48e-08!2;UBERON:0001995!1.48e-08!2;UBERON:0004715!1.48e-08!2;UBERON:0001468!1.48e-08!2;UBERON:0001130!1.48e-08!2;UBERON:0001066!1.48e-08!2;UBERON:0004905!3.71e-07!5;UBERON:0000982!3.71e-07!5;UBERON:0004770!3.71e-07!5|ontology_enrichment_uberon_v019=UBERON:0007195;2.93e-23;1!UBERON:0005705;2.93e-23;1!UBERON:0008193;2.93e-23;1!UBERON:0010912;2.93e-23;1!UBERON:0002514;2.93e-23;1!UBERON:0003457;2.93e-23;1!UBERON:0008907;2.93e-23;1!UBERON:0008001;2.93e-23;1!UBERON:0007213;2.93e-23;1!UBERON:0009891;2.93e-23;1!UBERON:0007914;2.93e-23;1!UBERON:0007375;2.93e-23;1!UBERON:0003323;2.93e-23;1!UBERON:0010258;2.93e-23;1!UBERON:0005253;2.93e-23;1!UBERON:0007842;2.93e-23;1!UBERON:0002397;2.93e-23;1!UBERON:0003113;2.93e-23;1!UBERON:0003277;2.93e-23;1!UBERON:0001709;2.93e-23;1!UBERON:0002244;2.93e-23;1!UBERON:0005620;2.93e-23;1!UBERON:0010364;2.93e-23;1!UBERON:0004288;2.93e-23;1!UBERON:0004765;6.09e-14;26!UBERON:0006444;2.45e-12;2!UBERON:0001995;2.45e-12;2!UBERON:0004715;2.45e-12;2!UBERON:0004089;2.45e-12;2!UBERON:0001474;1.13e-11;18!UBERON:0002418;1.17e-08;3!UBERON:0004755;1.17e-08;3!UBERON:0002371;2.65e-08;12!UBERON:0001434;5.01e-08;36!UBERON:0001708;8.37e-07;4!UBERON:0008895;8.37e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.67e-23,1;UBERON:0008193,1.67e-23,1;UBERON:0010912,1.67e-23,1;UBERON:0002514,1.67e-23,1;UBERON:0003457,1.67e-23,1;UBERON:0008907,1.67e-23,1;UBERON:0008001,1.67e-23,1;UBERON:0007213,1.67e-23,1;UBERON:0009891,1.67e-23,1;UBERON:0007914,1.67e-23,1;UBERON:0009292,1.67e-23,1;UBERON:0003099,1.67e-23,1;UBERON:0007375,1.67e-23,1;UBERON:0003323,1.67e-23,1;UBERON:0010258,1.67e-23,1;UBERON:0007842,1.67e-23,1;UBERON:0009494,1.67e-23,1;UBERON:0010042,1.67e-23,1;UBERON:0010045,1.67e-23,1;UBERON:0010259,1.67e-23,1;UBERON:0010359,1.67e-23,1;UBERON:0009526,1.67e-23,1;UBERON:0002397,1.67e-23,1;UBERON:0003113,1.67e-23,1;UBERON:0003277,1.67e-23,1;UBERON:0001709,1.67e-23,1;UBERON:0004066,1.67e-23,1;UBERON:0002244,1.67e-23,1;UBERON:0005620,1.67e-23,1;UBERON:0004362,1.67e-23,1;UBERON:0010364,1.67e-23,1;UBERON:0010046,1.67e-23,1;UBERON:0005868,1.67e-23,1;UBERON:0007238,1.67e-23,1;UBERON:0004288,1.67e-23,1;UBERON:0004068,1.67e-23,1;UBERON:0010334,1.67e-23,1;UBERON:0003852,1.67e-23,1;UBERON:0010253,1.67e-23,1;UBERON:0007195,6.40e-23,1;UBERON:0005253,1.85e-12,2;UBERON:0004089,1.85e-12,2;UBERON:0006444,2.32e-12,2;UBERON:0001995,2.32e-12,2;UBERON:0004715,2.32e-12,2;UBERON:0002418,1.12e-08,3;UBERON:0004755,1.12e-08,3;UBERON:0001708,7.27e-07,4;UBERON:0008895,7.27e-07,4|phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,1.48519623552056,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,1.14382394926518,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,1.2276957863045,0,0,0,0,0,0,0.177561725313127,0.657017248110473,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:38706154..38706158,+ | |||
|id=chr17:38706154..38706158,+ | |||
|ontology_enrichment_celltype=CL:0000569!1.99e-15!4;CL:0000011!1.99e-15!4;CL:0002540!1.66e-09!6;CL:0002602!1.48e-08!2;CL:0002195!2.92e-08!2;CL:0002571!2.92e-08!2;CL:0002334!3.35e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000569;3.88e-23;4!CL:0002195;2.45e-12;2!CL:0002571;2.45e-12;2!CL:0002602;2.45e-12;2!CL:0002580;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,3.29e-23,4;CL:0000011,3.29e-23,4;CL:0002602,2.32e-12,2;CL:0002195,3.24e-12,2;CL:0002571,3.24e-12,2;CL:0002580,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.93e-23;1!UBERON:0003852;2.93e-23;1!CL:0000011;3.88e-23;4!UBERON:0005062;8.37e-07;4!UBERON:0007284;8.37e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009568!1.48e-08!2;UBERON:0002216!1.48e-08!2;UBERON:0002209!1.48e-08!2;UBERON:0002213!1.48e-08!2;UBERON:0004267!1.48e-08!2;UBERON:0006444!1.48e-08!2;UBERON:0001995!1.48e-08!2;UBERON:0004715!1.48e-08!2;UBERON:0001468!1.48e-08!2;UBERON:0001130!1.48e-08!2;UBERON:0001066!1.48e-08!2;UBERON:0004905!3.71e-07!5;UBERON:0000982!3.71e-07!5;UBERON:0004770!3.71e-07!5 | |||
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|short_description=p@chr17:38706154..38706158,+ | |||
}} |
Revision as of 13:29, 11 September 2013
Short description: | p@chr17:38706154..38706158, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38706154..38706158, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 3.29e-23 | 4 |
migratory trunk neural crest cell | 3.29e-23 | 4 |
annulus pulposus cell | 2.32e-12 | 2 |
hepatic stem cell | 3.24e-12 | 2 |
hepatic mesenchymal stem cell | 3.24e-12 | 2 |
preadipocyte of the breast | 1.30e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.