FFCP PHASE1:Hg19::chr17:38613229..38613250,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C353|description=CAGE_peak_at_chr17:38613229..38613250,+|id=chr17:38613229..38613250,+|ontology_enrichment_celltype=CL:0000055!1.52e-22!180;CL:0000680!2.18e-18!57;CL:0000056!2.18e-18!57;CL:0000355!2.18e-18!57;CL:0000183!2.71e-18!59;CL:0000222!4.08e-17!119;CL:0000187!7.83e-17!54;CL:0000192!1.41e-15!42;CL:0000514!1.41e-15!42;CL:0000393!3.21e-15!60;CL:0000211!3.21e-15!60;CL:0000359!3.00e-12!32;CL:0000057!1.15e-10!75;CL:0000220!9.07e-09!246;CL:0002321!1.20e-08!248;CL:0002371!3.47e-08!591;CL:0000144!3.59e-07!625|ontology_enrichment_celltype_v019=CL:0000359;3.63e-11;32!CL:0000192;1.12e-08;43!CL:0000499;5.49e-07;28|ontology_enrichment_celltype_v019_2=CL:0000680,2.40e-13,58;CL:0000056,2.40e-13,58;CL:0000355,2.40e-13,58;CL:0000187,3.35e-12,55;CL:0000192,4.72e-12,43;CL:0000514,4.72e-12,43;CL:0000359,4.85e-11,32;CL:0000393,6.55e-11,61;CL:0000211,6.55e-11,61;CL:0000048,3.60e-09,427;CL:0000222,3.70e-09,121;CL:0000723,1.28e-08,433;CL:0000034,6.39e-08,441;CL:0000499,5.30e-07,28;CL:0000057,7.11e-07,76|ontology_enrichment_development_v019=CL:0000514;1.12e-08;43!CL:0000355;6.79e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!2.85e-19!143;UBERON:0000914!3.72e-19!83;UBERON:0002329!3.72e-19!83;UBERON:0003077!3.72e-19!83;UBERON:0003059!3.72e-19!83;UBERON:0007282!3.72e-19!83;UBERON:0009618!3.72e-19!83;UBERON:0007285!3.72e-19!83;UBERON:0002100!5.75e-19!216;UBERON:0004290!4.33e-18!70;UBERON:0001134!2.16e-17!61;UBERON:0002036!2.16e-17!61;UBERON:0003082!2.16e-17!61;UBERON:0000486!3.22e-17!82;UBERON:0002385!1.22e-16!63;UBERON:0001015!1.22e-16!63;UBERON:0000383!1.22e-16!63;UBERON:0000490!8.02e-16!138;UBERON:0002049!2.24e-15!79;UBERON:0007798!2.24e-15!79;UBERON:0004872!5.68e-14!84;UBERON:0003914!7.12e-13!118;UBERON:0003104!4.32e-12!238;UBERON:0009142!4.32e-12!238;UBERON:0001981!4.46e-12!60;UBERON:0007500!4.46e-12!60;UBERON:0004537!4.46e-12!60;UBERON:0006965!4.46e-12!60;UBERON:0001637!6.40e-12!42;UBERON:0003509!6.40e-12!42;UBERON:0004572!6.40e-12!42;UBERON:0000055!7.78e-12!69;UBERON:0001009!5.52e-11!113;UBERON:0004535!5.56e-11!110;UBERON:0004573!6.71e-10!33;UBERON:0004571!6.71e-10!33;UBERON:0000475!2.89e-09!365;UBERON:0000926!4.48e-09!448;UBERON:0004120!4.48e-09!448;UBERON:0006603!4.48e-09!448;UBERON:0000481!8.04e-08!347;UBERON:0000468!1.38e-07!659|ontology_enrichment_uberon_v019=UBERON:0004573;5.78e-09;33!UBERON:0004571;5.78e-09;33!UBERON:0004457;6.22e-09;9!UBERON:0000042;6.22e-09;9!UBERON:0004905;1.53e-08;8!UBERON:0000982;1.53e-08;8!UBERON:0004770;1.53e-08;8!UBERON:0003688;7.16e-08;6!UBERON:0002358;7.16e-08;6!UBERON:0003684;7.16e-08;6!UBERON:0001178;7.16e-08;6!UBERON:0011135;1.43e-07;5!UBERON:0002216;1.43e-07;5!UBERON:0011134;1.43e-07;5!UBERON:0002209;1.43e-07;5!UBERON:0002213;1.43e-07;5!UBERON:0007844;1.43e-07;5!UBERON:0011138;1.43e-07;5!UBERON:0001130;1.43e-07;5!UBERON:0001066;1.43e-07;5!UBERON:0001468;1.43e-07;5!UBERON:0001637;2.06e-07;42!UBERON:0003509;2.06e-07;42!UBERON:0004572;2.06e-07;42!UBERON:0002204;6.19e-07;70|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.50e-13,73;UBERON:0007503,3.50e-13,78;UBERON:0002329,6.22e-13,71;UBERON:0003059,6.22e-13,71;UBERON:0007282,6.22e-13,71;UBERON:0004290,6.22e-13,71;UBERON:0009618,6.22e-13,71;UBERON:0001134,1.15e-12,62;UBERON:0002036,1.15e-12,62;UBERON:0003082,1.15e-12,62;UBERON:0003077,1.38e-12,72;UBERON:0007285,1.38e-12,72;UBERON:0005256,3.89e-12,122;UBERON:0000486,5.43e-12,83;UBERON:0002385,6.25e-12,64;UBERON:0001015,6.25e-12,64;UBERON:0000383,6.25e-12,64;UBERON:0003104,1.02e-11,160;UBERON:0009142,1.02e-11,160;UBERON:0000490,8.28e-11,148;UBERON:0004573,8.41e-10,33;UBERON:0004571,8.41e-10,33;UBERON:0001637,9.94e-10,42;UBERON:0003509,9.94e-10,42;UBERON:0004572,9.94e-10,42;UBERON:0002100,2.58e-09,199;UBERON:0002049,1.05e-08,78;UBERON:0007798,1.05e-08,78;UBERON:0007500,1.49e-08,59;UBERON:0001981,1.49e-08,59;UBERON:0004537,1.49e-08,59;UBERON:0006965,1.49e-08,59;UBERON:0004905,1.57e-08,8;UBERON:0000982,1.57e-08,8;UBERON:0004770,1.57e-08,8;UBERON:0003688,8.50e-08,6;UBERON:0002358,8.50e-08,6;UBERON:0003684,8.50e-08,6;UBERON:0001178,8.50e-08,6;UBERON:0011135,1.48e-07,5;UBERON:0002216,1.48e-07,5;UBERON:0011134,1.48e-07,5;UBERON:0002209,1.48e-07,5;UBERON:0002213,1.48e-07,5;UBERON:0005856,1.48e-07,5;UBERON:0005866,1.48e-07,5;UBERON:0005863,1.48e-07,5;UBERON:0007844,1.48e-07,5;UBERON:0011138,1.48e-07,5;UBERON:0001130,1.48e-07,5;UBERON:0001066,1.48e-07,5;UBERON:0001468,1.48e-07,5;UBERON:0004872,1.85e-07,83;UBERON:0000926,3.32e-07,315;UBERON:0004120,3.32e-07,315;UBERON:0006603,3.32e-07,315;UBERON:0003914,4.11e-07,117;UBERON:0002204,5.49e-07,167;UBERON:0000055,6.16e-07,68|phase1_expression=3.99692434395225,4.92431204949261,3.52386010239928,5.00366491765652,5.36353313312745,12.2127393374052,0,1.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613229..38613250,+ | |||
|id=chr17:38613229..38613250,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.52e-22!180;CL:0000680!2.18e-18!57;CL:0000056!2.18e-18!57;CL:0000355!2.18e-18!57;CL:0000183!2.71e-18!59;CL:0000222!4.08e-17!119;CL:0000187!7.83e-17!54;CL:0000192!1.41e-15!42;CL:0000514!1.41e-15!42;CL:0000393!3.21e-15!60;CL:0000211!3.21e-15!60;CL:0000359!3.00e-12!32;CL:0000057!1.15e-10!75;CL:0000220!9.07e-09!246;CL:0002321!1.20e-08!248;CL:0002371!3.47e-08!591;CL:0000144!3.59e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.63e-11;32!CL:0000192;1.12e-08;43!CL:0000499;5.49e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.40e-13,58;CL:0000056,2.40e-13,58;CL:0000355,2.40e-13,58;CL:0000187,3.35e-12,55;CL:0000192,4.72e-12,43;CL:0000514,4.72e-12,43;CL:0000359,4.85e-11,32;CL:0000393,6.55e-11,61;CL:0000211,6.55e-11,61;CL:0000048,3.60e-09,427;CL:0000222,3.70e-09,121;CL:0000723,1.28e-08,433;CL:0000034,6.39e-08,441;CL:0000499,5.30e-07,28;CL:0000057,7.11e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-08;43!CL:0000355;6.79e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.85e-19!143;UBERON:0000914!3.72e-19!83;UBERON:0002329!3.72e-19!83;UBERON:0003077!3.72e-19!83;UBERON:0003059!3.72e-19!83;UBERON:0007282!3.72e-19!83;UBERON:0009618!3.72e-19!83;UBERON:0007285!3.72e-19!83;UBERON:0002100!5.75e-19!216;UBERON:0004290!4.33e-18!70;UBERON:0001134!2.16e-17!61;UBERON:0002036!2.16e-17!61;UBERON:0003082!2.16e-17!61;UBERON:0000486!3.22e-17!82;UBERON:0002385!1.22e-16!63;UBERON:0001015!1.22e-16!63;UBERON:0000383!1.22e-16!63;UBERON:0000490!8.02e-16!138;UBERON:0002049!2.24e-15!79;UBERON:0007798!2.24e-15!79;UBERON:0004872!5.68e-14!84;UBERON:0003914!7.12e-13!118;UBERON:0003104!4.32e-12!238;UBERON:0009142!4.32e-12!238;UBERON:0001981!4.46e-12!60;UBERON:0007500!4.46e-12!60;UBERON:0004537!4.46e-12!60;UBERON:0006965!4.46e-12!60;UBERON:0001637!6.40e-12!42;UBERON:0003509!6.40e-12!42;UBERON:0004572!6.40e-12!42;UBERON:0000055!7.78e-12!69;UBERON:0001009!5.52e-11!113;UBERON:0004535!5.56e-11!110;UBERON:0004573!6.71e-10!33;UBERON:0004571!6.71e-10!33;UBERON:0000475!2.89e-09!365;UBERON:0000926!4.48e-09!448;UBERON:0004120!4.48e-09!448;UBERON:0006603!4.48e-09!448;UBERON:0000481!8.04e-08!347;UBERON:0000468!1.38e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.78e-09;33!UBERON:0004571;5.78e-09;33!UBERON:0004457;6.22e-09;9!UBERON:0000042;6.22e-09;9!UBERON:0004905;1.53e-08;8!UBERON:0000982;1.53e-08;8!UBERON:0004770;1.53e-08;8!UBERON:0003688;7.16e-08;6!UBERON:0002358;7.16e-08;6!UBERON:0003684;7.16e-08;6!UBERON:0001178;7.16e-08;6!UBERON:0011135;1.43e-07;5!UBERON:0002216;1.43e-07;5!UBERON:0011134;1.43e-07;5!UBERON:0002209;1.43e-07;5!UBERON:0002213;1.43e-07;5!UBERON:0007844;1.43e-07;5!UBERON:0011138;1.43e-07;5!UBERON:0001130;1.43e-07;5!UBERON:0001066;1.43e-07;5!UBERON:0001468;1.43e-07;5!UBERON:0001637;2.06e-07;42!UBERON:0003509;2.06e-07;42!UBERON:0004572;2.06e-07;42!UBERON:0002204;6.19e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.50e-13,73;UBERON:0007503,3.50e-13,78;UBERON:0002329,6.22e-13,71;UBERON:0003059,6.22e-13,71;UBERON:0007282,6.22e-13,71;UBERON:0004290,6.22e-13,71;UBERON:0009618,6.22e-13,71;UBERON:0001134,1.15e-12,62;UBERON:0002036,1.15e-12,62;UBERON:0003082,1.15e-12,62;UBERON:0003077,1.38e-12,72;UBERON:0007285,1.38e-12,72;UBERON:0005256,3.89e-12,122;UBERON:0000486,5.43e-12,83;UBERON:0002385,6.25e-12,64;UBERON:0001015,6.25e-12,64;UBERON:0000383,6.25e-12,64;UBERON:0003104,1.02e-11,160;UBERON:0009142,1.02e-11,160;UBERON:0000490,8.28e-11,148;UBERON:0004573,8.41e-10,33;UBERON:0004571,8.41e-10,33;UBERON:0001637,9.94e-10,42;UBERON:0003509,9.94e-10,42;UBERON:0004572,9.94e-10,42;UBERON:0002100,2.58e-09,199;UBERON:0002049,1.05e-08,78;UBERON:0007798,1.05e-08,78;UBERON:0007500,1.49e-08,59;UBERON:0001981,1.49e-08,59;UBERON:0004537,1.49e-08,59;UBERON:0006965,1.49e-08,59;UBERON:0004905,1.57e-08,8;UBERON:0000982,1.57e-08,8;UBERON:0004770,1.57e-08,8;UBERON:0003688,8.50e-08,6;UBERON:0002358,8.50e-08,6;UBERON:0003684,8.50e-08,6;UBERON:0001178,8.50e-08,6;UBERON:0011135,1.48e-07,5;UBERON:0002216,1.48e-07,5;UBERON:0011134,1.48e-07,5;UBERON:0002209,1.48e-07,5;UBERON:0002213,1.48e-07,5;UBERON:0005856,1.48e-07,5;UBERON:0005866,1.48e-07,5;UBERON:0005863,1.48e-07,5;UBERON:0007844,1.48e-07,5;UBERON:0011138,1.48e-07,5;UBERON:0001130,1.48e-07,5;UBERON:0001066,1.48e-07,5;UBERON:0001468,1.48e-07,5;UBERON:0004872,1.85e-07,83;UBERON:0000926,3.32e-07,315;UBERON:0004120,3.32e-07,315;UBERON:0006603,3.32e-07,315;UBERON:0003914,4.11e-07,117;UBERON:0002204,5.49e-07,167;UBERON:0000055,6.16e-07,68 | |||
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| |||
|short_description=p@chr17:38613229..38613250,+ | |||
}} |
Revision as of 13:27, 11 September 2013
Short description: | p@chr17:38613229..38613250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38613229..38613250, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.40e-13 | 58 |
myoblast | 2.40e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.40e-13 | 58 |
muscle cell | 3.35e-12 | 55 |
smooth muscle cell | 4.72e-12 | 43 |
smooth muscle myoblast | 4.72e-12 | 43 |
vascular associated smooth muscle cell | 4.85e-11 | 32 |
electrically responsive cell | 6.55e-11 | 61 |
electrically active cell | 6.55e-11 | 61 |
multi fate stem cell | 3.60e-09 | 427 |
mesodermal cell | 3.70e-09 | 121 |
somatic stem cell | 1.28e-08 | 433 |
stem cell | 6.39e-08 | 441 |
stromal cell | 5.30e-07 | 28 |
fibroblast | 7.11e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.