FFCP PHASE1:Hg19::chr17:38179600..38179634,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22963|TSSclassifier=S|UniProt=|association_with_transcript=125bp_to_ENST00000492176_5end|coexpression_cluster_id=C1399|description=CAGE_peak_2_at_MED24_5end|id=chr17:38179600..38179634,-|ontology_enrichment_celltype=CL:0002368!7.71e-13!13;CL:0000066!3.39e-09!254;CL:0002202!9.68e-09!9;CL:0002632!9.68e-09!9;CL:0002076!8.69e-08!43|ontology_enrichment_celltype_v019=CL:0002368;8.55e-23;13!CL:0002202;1.69e-15;9!CL:0002632;1.69e-15;9!CL:0002076;2.24e-13;42!CL:0000307;1.02e-12;3!CL:0002328;1.15e-12;3!CL:0000575;1.67e-08;2|ontology_enrichment_celltype_v019_2=CL:0002368,8.57e-23,13;CL:0002076,9.25e-17,42;CL:0002202,1.69e-15,9;CL:0002632,1.69e-15,9;CL:0000068,1.02e-12,3;CL:0000069,1.02e-12,3;CL:0000307,1.02e-12,3;CL:0000377,1.02e-12,3;CL:0002328,1.15e-12,3;CL:0000223,3.92e-11,58;CL:0000066,3.48e-09,253;CL:0000575,1.67e-08,2|ontology_enrichment_development_v019=CL:0000377;1.02e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;1.78e-08;4!DOID:1612;1.78e-08;4|ontology_enrichment_disease_v019_2=DOID:5093,1.65e-08,4;DOID:1612,1.65e-08,4|ontology_enrichment_uberon=UBERON:0001004!1.78e-16!72;UBERON:0004119!5.53e-12!169;UBERON:0000925!5.53e-12!169;UBERON:0006595!5.53e-12!169;UBERON:0000065!8.21e-12!53;UBERON:0007196!4.85e-11!14;UBERON:0001558!4.85e-11!14;UBERON:0005178!1.26e-10!34;UBERON:0002224!1.26e-10!34;UBERON:0000464!1.44e-10!104;UBERON:0005181!4.08e-10!35;UBERON:0001007!9.39e-10!155;UBERON:0001555!9.39e-10!155;UBERON:0007026!9.39e-10!155;UBERON:0000915!1.04e-08!52;UBERON:0004921!2.18e-08!129;UBERON:0004185!2.18e-08!129;UBERON:0005157!2.90e-08!51;UBERON:0008947!7.83e-08!38;UBERON:0003258!7.83e-08!38;UBERON:0005153!1.05e-07!37;UBERON:0000161!2.37e-07!35;UBERON:0000072!3.22e-07!46|ontology_enrichment_uberon_v019=UBERON:0007196;2.49e-15;15!UBERON:0001558;2.49e-15;15!UBERON:0003126;1.47e-13;7!UBERON:0001005;1.47e-13;7!UBERON:0004815;1.15e-12;3!UBERON:0002031;1.15e-12;3!UBERON:0005178;3.01e-12;34!UBERON:0002224;3.01e-12;34!UBERON:0005181;1.94e-10;35!UBERON:0001044;3.90e-10;6!UBERON:0003293;3.90e-10;6!UBERON:0003294;3.90e-10;6!UBERON:0010047;3.90e-10;6!UBERON:0003408;3.90e-10;6!UBERON:0000167;3.90e-10;6!UBERON:0000065;1.29e-09;44!UBERON:0001041;7.37e-09;14!UBERON:0001004;9.90e-09;65!UBERON:0000915;1.10e-08;52!UBERON:0000161;1.70e-08;19!UBERON:0000166;1.70e-08;19!UBERON:0003127;3.87e-08;2!UBERON:0001829;4.47e-08;2!UBERON:0006562;5.54e-08;2!UBERON:0002185;9.66e-08;5!UBERON:0004921;3.72e-07;33!UBERON:0000165;5.68e-07;28|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.43e-18,74;UBERON:0007196,2.64e-15,15;UBERON:0001558,2.64e-15,15;UBERON:0000065,1.06e-13,54;UBERON:0003126,1.59e-13,7;UBERON:0001005,1.59e-13,7;UBERON:0005178,2.62e-13,34;UBERON:0002224,2.62e-13,34;UBERON:0004119,5.90e-13,160;UBERON:0000925,5.90e-13,160;UBERON:0006595,5.90e-13,160;UBERON:0005181,7.53e-13,35;UBERON:0004815,1.15e-12,3;UBERON:0002031,1.15e-12,3;UBERON:0000915,1.79e-12,52;UBERON:0004921,1.05e-11,118;UBERON:0001007,1.86e-11,145;UBERON:0001555,1.86e-11,145;UBERON:0007026,1.86e-11,145;UBERON:0001041,1.44e-10,87;UBERON:0005157,2.36e-10,47;UBERON:0001044,4.19e-10,6;UBERON:0003293,4.19e-10,6;UBERON:0003294,4.19e-10,6;UBERON:0010047,4.19e-10,6;UBERON:0000167,4.19e-10,6;UBERON:0008947,9.63e-10,38;UBERON:0003258,9.63e-10,38;UBERON:0000166,3.71e-09,22;UBERON:0000161,4.27e-08,36;UBERON:0003127,4.31e-08,2;UBERON:0005153,4.76e-08,37;UBERON:0001829,4.98e-08,2;UBERON:0002185,9.67e-08,5;UBERON:0000072,2.57e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,109.411125712992,54.5182712988633,66.9254758401886,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,5.46442932438813,10.381964397964,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0.775250277507987,0,0,0,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0.22452937262617,0.225222960966644,0,1.89853131913626,0.183201743930407,0,0,2.61656431285521,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.368502951935304,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.92369497969517,2.45471508531751,0,0.243947412259191,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,2.24803506515239,1.80952150340936,0,0.325808305310325,0,0,0,0,9.09508620894765,12.9635943521451,16.1716029399409,2.37061319387782,1.71697232418975,0,0,0,0,0.1679821281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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22963 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=125bp_to_ENST00000492176_5end | |||
|coexpression_cluster_id=C1399 | |||
|description=CAGE_peak_2_at_MED24_5end | |||
|id=chr17:38179600..38179634,- | |||
|ontology_enrichment_celltype=CL:0002368!7.71e-13!13;CL:0000066!3.39e-09!254;CL:0002202!9.68e-09!9;CL:0002632!9.68e-09!9;CL:0002076!8.69e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.55e-23;13!CL:0002202;1.69e-15;9!CL:0002632;1.69e-15;9!CL:0002076;2.24e-13;42!CL:0000307;1.02e-12;3!CL:0002328;1.15e-12;3!CL:0000575;1.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,8.57e-23,13;CL:0002076,9.25e-17,42;CL:0002202,1.69e-15,9;CL:0002632,1.69e-15,9;CL:0000068,1.02e-12,3;CL:0000069,1.02e-12,3;CL:0000307,1.02e-12,3;CL:0000377,1.02e-12,3;CL:0002328,1.15e-12,3;CL:0000223,3.92e-11,58;CL:0000066,3.48e-09,253;CL:0000575,1.67e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.02e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.78e-08;4!DOID:1612;1.78e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.65e-08,4;DOID:1612,1.65e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.78e-16!72;UBERON:0004119!5.53e-12!169;UBERON:0000925!5.53e-12!169;UBERON:0006595!5.53e-12!169;UBERON:0000065!8.21e-12!53;UBERON:0007196!4.85e-11!14;UBERON:0001558!4.85e-11!14;UBERON:0005178!1.26e-10!34;UBERON:0002224!1.26e-10!34;UBERON:0000464!1.44e-10!104;UBERON:0005181!4.08e-10!35;UBERON:0001007!9.39e-10!155;UBERON:0001555!9.39e-10!155;UBERON:0007026!9.39e-10!155;UBERON:0000915!1.04e-08!52;UBERON:0004921!2.18e-08!129;UBERON:0004185!2.18e-08!129;UBERON:0005157!2.90e-08!51;UBERON:0008947!7.83e-08!38;UBERON:0003258!7.83e-08!38;UBERON:0005153!1.05e-07!37;UBERON:0000161!2.37e-07!35;UBERON:0000072!3.22e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;2.49e-15;15!UBERON:0001558;2.49e-15;15!UBERON:0003126;1.47e-13;7!UBERON:0001005;1.47e-13;7!UBERON:0004815;1.15e-12;3!UBERON:0002031;1.15e-12;3!UBERON:0005178;3.01e-12;34!UBERON:0002224;3.01e-12;34!UBERON:0005181;1.94e-10;35!UBERON:0001044;3.90e-10;6!UBERON:0003293;3.90e-10;6!UBERON:0003294;3.90e-10;6!UBERON:0010047;3.90e-10;6!UBERON:0003408;3.90e-10;6!UBERON:0000167;3.90e-10;6!UBERON:0000065;1.29e-09;44!UBERON:0001041;7.37e-09;14!UBERON:0001004;9.90e-09;65!UBERON:0000915;1.10e-08;52!UBERON:0000161;1.70e-08;19!UBERON:0000166;1.70e-08;19!UBERON:0003127;3.87e-08;2!UBERON:0001829;4.47e-08;2!UBERON:0006562;5.54e-08;2!UBERON:0002185;9.66e-08;5!UBERON:0004921;3.72e-07;33!UBERON:0000165;5.68e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.43e-18,74;UBERON:0007196,2.64e-15,15;UBERON:0001558,2.64e-15,15;UBERON:0000065,1.06e-13,54;UBERON:0003126,1.59e-13,7;UBERON:0001005,1.59e-13,7;UBERON:0005178,2.62e-13,34;UBERON:0002224,2.62e-13,34;UBERON:0004119,5.90e-13,160;UBERON:0000925,5.90e-13,160;UBERON:0006595,5.90e-13,160;UBERON:0005181,7.53e-13,35;UBERON:0004815,1.15e-12,3;UBERON:0002031,1.15e-12,3;UBERON:0000915,1.79e-12,52;UBERON:0004921,1.05e-11,118;UBERON:0001007,1.86e-11,145;UBERON:0001555,1.86e-11,145;UBERON:0007026,1.86e-11,145;UBERON:0001041,1.44e-10,87;UBERON:0005157,2.36e-10,47;UBERON:0001044,4.19e-10,6;UBERON:0003293,4.19e-10,6;UBERON:0003294,4.19e-10,6;UBERON:0010047,4.19e-10,6;UBERON:0000167,4.19e-10,6;UBERON:0008947,9.63e-10,38;UBERON:0003258,9.63e-10,38;UBERON:0000166,3.71e-09,22;UBERON:0000161,4.27e-08,36;UBERON:0003127,4.31e-08,2;UBERON:0005153,4.76e-08,37;UBERON:0001829,4.98e-08,2;UBERON:0002185,9.67e-08,5;UBERON:0000072,2.57e-07,47 | |||
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| |||
|short_description=p2@MED24 | |||
}} |
Revision as of 13:22, 11 September 2013
Short description: | p2@MED24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MED24_5end |
Coexpression cluster: | C1399_Bronchial_Tracheal_bronchial_Lymphatic_salivary_Small_lung |
Association with transcript: | 125bp_to_ENST00000492176_5end |
EntrezGene: | MED24 |
HGNC: | 22963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.57e-23 | 13 |
endo-epithelial cell | 9.25e-17 | 42 |
epithelial cell of tracheobronchial tree | 1.69e-15 | 9 |
epithelial cell of lower respiratory tract | 1.69e-15 | 9 |
duct epithelial cell | 1.02e-12 | 3 |
branched duct epithelial cell | 1.02e-12 | 3 |
tracheal epithelial cell | 1.02e-12 | 3 |
tracheoblast | 1.02e-12 | 3 |
bronchial epithelial cell | 1.15e-12 | 3 |
endodermal cell | 3.92e-11 | 58 |
epithelial cell | 3.48e-09 | 253 |
corneal epithelial cell | 1.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.65e-08 | 4 |
breast cancer | 1.65e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.