FFCP PHASE1:Hg19::chr17:38020516..38020544,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22806|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13178|TSSclassifier=S|UniProt=Q9UKT9|association_with_transcript=-75bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc002hsw.2,uc002hsx.2,uc002hsy.2,uc002hsz.2,uc002hta.2,uc002htb.2,uc002htc.2,uc002htd.2,uc010cwd.2,uc010cwe.2,uc010cwf.2,uc010cwg.2,uc010cwh.2_5end|coexpression_cluster_id=C272|description=CAGE_peak_5_at_IKZF3_5end|id=chr17:38020516..38020544,-|ontology_enrichment_celltype=CL:0000542!2.41e-49!53;CL:0000051!2.41e-49!53;CL:0000838!2.35e-48!52;CL:0000738!1.05e-32!140;CL:0002087!1.84e-28!119;CL:0000037!3.30e-26!172;CL:0000566!3.30e-26!172;CL:0000988!1.66e-25!182;CL:0002031!9.52e-25!124;CL:0000945!1.56e-24!24;CL:0000826!1.56e-24!24;CL:0002032!1.77e-23!165;CL:0000837!1.77e-23!165;CL:0000084!3.95e-21!25;CL:0000827!3.95e-21!25;CL:0000791!3.94e-20!18;CL:0000789!3.94e-20!18;CL:0002420!3.94e-20!18;CL:0002419!3.94e-20!18;CL:0000790!3.94e-20!18;CL:0000236!4.15e-17!14;CL:0000625!2.77e-13!11;CL:0000624!1.40e-07!6|ontology_enrichment_celltype_v019=CL:0000542;2.82e-40;53!CL:0000791;1.43e-32;18!CL:0000789;1.43e-32;18!CL:0002419;1.43e-32;18!CL:0000945;7.12e-32;24!CL:0000084;1.25e-29;25!CL:0000236;3.41e-26;13!CL:0000625;4.18e-21;11!CL:0000624;1.23e-11;6!CL:0002087;7.21e-11;104!CL:0000738;1.45e-07;136!CL:0000623;2.55e-07;3!CL:0000226;8.41e-07;3!CL:0000842;8.41e-07;3|ontology_enrichment_celltype_v019_2=CL:0000542,1.00e-68,53;CL:0000051,1.00e-68,53;CL:0000838,4.33e-67,52;CL:0000738,7.44e-37,136;CL:0002087,1.69e-33,115;CL:0000791,1.15e-32,18;CL:0000789,1.15e-32,18;CL:0002420,1.15e-32,18;CL:0002419,1.15e-32,18;CL:0000790,1.15e-32,18;CL:0000945,6.43e-32,24;CL:0000826,6.43e-32,24;CL:0000084,8.88e-30,25;CL:0000827,8.88e-30,25;CL:0002031,2.98e-28,120;CL:0000037,1.21e-27,168;CL:0000236,1.37e-27,14;CL:0000988,2.16e-26,177;CL:0002032,1.49e-23,161;CL:0000837,1.49e-23,161;CL:0000625,3.59e-21,11;CL:0000624,1.23e-11,6;CL:0000623,2.50e-07,3;CL:0000825,2.50e-07,3;CL:0000226,9.01e-07,3;CL:0000842,9.01e-07,3|ontology_enrichment_development_v019=CL:0000051;2.82e-40;53!CL:0000790;1.43e-32;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;7.21e-08;10|ontology_enrichment_disease_v019_2=DOID:0060058,5.94e-08,10|ontology_enrichment_uberon=UBERON:0007023!9.85e-18!115;UBERON:0000178!1.54e-14!15;UBERON:0000179!1.54e-14!15;UBERON:0000463!1.54e-14!15;UBERON:0004177!2.90e-08!7|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-18;15!UBERON:0000179;1.60e-18;15!UBERON:0000463;1.60e-18;15!UBERON:0002390;5.91e-15;32!UBERON:0002193;3.77e-10;42!UBERON:0004177;1.50e-09;5!UBERON:0005057;1.50e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.50e-18,15;UBERON:0000179,1.50e-18,15;UBERON:0000463,1.50e-18,15;UBERON:0004177,8.99e-13,7;UBERON:0005057,8.99e-13,7;UBERON:0002370,2.15e-08,4;UBERON:0005058,2.15e-08,4;UBERON:0009113,2.15e-08,4;UBERON:0003295,2.15e-08,4;UBERON:0005562,2.15e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.47781061009902,2.36132343941038,5.11373559903575,7.67658796194425,3.56077083626975,0,0,0,4.41563043307719,3.55423081218554,0,2.21598163412751,3.00816671205213,3.47217393145363,0,1.29557466407592,0.515151135268373,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,15.839662001519,16.3841583378639,16.9006758234075,18.3493995703598,24.4241552091968,17.2425731986345,9.25462821898807,21.9432363543134,21.0608798570496,17.6171156811282,19.8782078625119,0,0,0,10.0321982758055,5.89516144123747,6.7848494669838,7.85776528336187,7.49621213257258,6.15482147455153,7.79306913631645,7.35309015442146,6.48132996444642,5.31681347000691,4.06205795647523,14.0900451698243,8.9740949816316,4.43982342429925,1.93445012450094,3.18783394308558,7.8591878475892,12.3068780921268,11.4989076185474,8.0449633315272,8.04763036564035,9.27794102803101,10.1207876807801,13.3797474016121,14.3238359848412,12.3558765778289,2.71035214339991,4.8634912238679,6.24653632761729,10.8917535940248,13.9591759476578,11.4915843638097,8.82552646085574,16.2203332348735,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0.174129737299267,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38994856843915,1.05658120815871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58672460779287,10.4426302907021,12.937654491571,15.0161352447306,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3384013061444,5.39285502046542,9.17856997109621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,1.52927441428475,5.69647187174163,9.29103924285377,4.52498500394814,3.24236655596359,3.24018862342869,13.4831279970026,0,0,0,4.83088255326869,1.87549976869378,1.42283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,10.4987887901836,0,0,0.492339221844278,0,0,0,0,0.493217028184668,9.57932369387759,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,3.06579894587209,0,1.66211681900156,0,0,0,0,0.476809736941136,0,0,0,0,0.995261931078505,0.884575645033392,1.22206028986725,1.18608451472249,0.123563938946503,0.417687798021821,0.067401132980677,0,0.234264445725339,4.37891494117598,0.391329237864179,0,0,1.20990716048664,0,0.568679216656392,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,1.26085721434945,0,0,0,0,0,0.586654148204409,0,1.28071796843612,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0.788662062837943,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0.423366660328922,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,1.70859860108311,0,2.48543433208317,14.8849806543585,1.7785046870815,5.60245952552121,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.398594520940089,0,0,0,0,1.9998739585493,0,3.78872955253794,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.177404740325278,2.07421177600403,0,0.135939465953663,0,0,0,0.470958557103084,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23478652972711,0.874238242015829,0,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,8.17660086424726,2.64277340691666,1.69899965072379,0,0,0,0,0.917458566809082,0,0.157771562193185,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0.310298987585686,0.426467963801962,0.23806443146374,11.3676481311371,8.69046000142011,0.224263725161227,0.0636471582781649,0.404234377916439,1.08858373948481,0,9.22723126299849,1.2192774916755,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0.665756774185513,7.04458277568592,0.320568492303233|short_description=p5@IKZF3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |||
|TSSclassifier=S | |||
|UniProt=Q9UKT9 | |||
|association_with_transcript=-75bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc002hsw.2,uc002hsx.2,uc002hsy.2,uc002hsz.2,uc002hta.2,uc002htb.2,uc002htc.2,uc002htd.2,uc010cwd.2,uc010cwe.2,uc010cwf.2,uc010cwg.2,uc010cwh.2_5end | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_5_at_IKZF3_5end | |||
|id=chr17:38020516..38020544,- | |||
|ontology_enrichment_celltype=CL:0000542!2.41e-49!53;CL:0000051!2.41e-49!53;CL:0000838!2.35e-48!52;CL:0000738!1.05e-32!140;CL:0002087!1.84e-28!119;CL:0000037!3.30e-26!172;CL:0000566!3.30e-26!172;CL:0000988!1.66e-25!182;CL:0002031!9.52e-25!124;CL:0000945!1.56e-24!24;CL:0000826!1.56e-24!24;CL:0002032!1.77e-23!165;CL:0000837!1.77e-23!165;CL:0000084!3.95e-21!25;CL:0000827!3.95e-21!25;CL:0000791!3.94e-20!18;CL:0000789!3.94e-20!18;CL:0002420!3.94e-20!18;CL:0002419!3.94e-20!18;CL:0000790!3.94e-20!18;CL:0000236!4.15e-17!14;CL:0000625!2.77e-13!11;CL:0000624!1.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.82e-40;53!CL:0000791;1.43e-32;18!CL:0000789;1.43e-32;18!CL:0002419;1.43e-32;18!CL:0000945;7.12e-32;24!CL:0000084;1.25e-29;25!CL:0000236;3.41e-26;13!CL:0000625;4.18e-21;11!CL:0000624;1.23e-11;6!CL:0002087;7.21e-11;104!CL:0000738;1.45e-07;136!CL:0000623;2.55e-07;3!CL:0000226;8.41e-07;3!CL:0000842;8.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.00e-68,53;CL:0000051,1.00e-68,53;CL:0000838,4.33e-67,52;CL:0000738,7.44e-37,136;CL:0002087,1.69e-33,115;CL:0000791,1.15e-32,18;CL:0000789,1.15e-32,18;CL:0002420,1.15e-32,18;CL:0002419,1.15e-32,18;CL:0000790,1.15e-32,18;CL:0000945,6.43e-32,24;CL:0000826,6.43e-32,24;CL:0000084,8.88e-30,25;CL:0000827,8.88e-30,25;CL:0002031,2.98e-28,120;CL:0000037,1.21e-27,168;CL:0000236,1.37e-27,14;CL:0000988,2.16e-26,177;CL:0002032,1.49e-23,161;CL:0000837,1.49e-23,161;CL:0000625,3.59e-21,11;CL:0000624,1.23e-11,6;CL:0000623,2.50e-07,3;CL:0000825,2.50e-07,3;CL:0000226,9.01e-07,3;CL:0000842,9.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.82e-40;53!CL:0000790;1.43e-32;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.21e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.94e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.85e-18!115;UBERON:0000178!1.54e-14!15;UBERON:0000179!1.54e-14!15;UBERON:0000463!1.54e-14!15;UBERON:0004177!2.90e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-18;15!UBERON:0000179;1.60e-18;15!UBERON:0000463;1.60e-18;15!UBERON:0002390;5.91e-15;32!UBERON:0002193;3.77e-10;42!UBERON:0004177;1.50e-09;5!UBERON:0005057;1.50e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.50e-18,15;UBERON:0000179,1.50e-18,15;UBERON:0000463,1.50e-18,15;UBERON:0004177,8.99e-13,7;UBERON:0005057,8.99e-13,7;UBERON:0002370,2.15e-08,4;UBERON:0005058,2.15e-08,4;UBERON:0009113,2.15e-08,4;UBERON:0003295,2.15e-08,4;UBERON:0005562,2.15e-08,4 | |||
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| |||
|short_description=p5@IKZF3 | |||
}} |
Revision as of 13:20, 11 September 2013
Short description: | p5@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IKZF3_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | -75bp_to_ENST00000293068, ENST00000346872, ENST00000348427, ENST00000377944, ENST00000377945, ENST00000377952, ENST00000377958, ENST00000394189, ENST00000488188, ENST00000535189, NM_012481, NM_183228, NM_183229, NM_183230, NM_183231, NM_183232, uc002hsu.2, uc002hsv.2, uc00 |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | Q9UKT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.00e-68 | 53 |
common lymphoid progenitor | 1.00e-68 | 53 |
lymphoid lineage restricted progenitor cell | 4.33e-67 | 52 |
leukocyte | 7.44e-37 | 136 |
nongranular leukocyte | 1.69e-33 | 115 |
mature alpha-beta T cell | 1.15e-32 | 18 |
alpha-beta T cell | 1.15e-32 | 18 |
immature T cell | 1.15e-32 | 18 |
mature T cell | 1.15e-32 | 18 |
immature alpha-beta T cell | 1.15e-32 | 18 |
lymphocyte of B lineage | 6.43e-32 | 24 |
pro-B cell | 6.43e-32 | 24 |
T cell | 8.88e-30 | 25 |
pro-T cell | 8.88e-30 | 25 |
hematopoietic lineage restricted progenitor cell | 2.98e-28 | 120 |
hematopoietic stem cell | 1.21e-27 | 168 |
B cell | 1.37e-27 | 14 |
hematopoietic cell | 2.16e-26 | 177 |
hematopoietic oligopotent progenitor cell | 1.49e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-23 | 161 |
CD8-positive, alpha-beta T cell | 3.59e-21 | 11 |
CD4-positive, alpha-beta T cell | 1.23e-11 | 6 |
natural killer cell | 2.50e-07 | 3 |
pro-NK cell | 2.50e-07 | 3 |
single nucleate cell | 9.01e-07 | 3 |
mononuclear cell | 9.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.50e-18 | 15 |
haemolymphatic fluid | 1.50e-18 | 15 |
organism substance | 1.50e-18 | 15 |
hemopoietic organ | 8.99e-13 | 7 |
immune organ | 8.99e-13 | 7 |
thymus | 2.15e-08 | 4 |
hemolymphoid system gland | 2.15e-08 | 4 |
thymic region | 2.15e-08 | 4 |
pharyngeal gland | 2.15e-08 | 4 |
thymus primordium | 2.15e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.94e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.