FFCP PHASE1:Hg19::chr17:20107643..20107658,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92521|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=30615|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc002gww.2_5end|description=CAGE_peak_7_at_SPECC1_5end|id=chr17:20107643..20107658,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;5.56e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.31e-11!115;UBERON:0005743!8.86e-11!86;UBERON:0001049!2.00e-10!57;UBERON:0005068!2.00e-10!57;UBERON:0006241!2.00e-10!57;UBERON:0007135!2.00e-10!57;UBERON:0001017!6.57e-10!82;UBERON:0000073!6.89e-09!94;UBERON:0001016!6.89e-09!94;UBERON:0002616!1.25e-07!59;UBERON:0001737!1.64e-07!9;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0000955!1.96e-07!69;UBERON:0006238!1.96e-07!69;UBERON:0003080!2.26e-07!42;UBERON:0002780!5.46e-07!41;UBERON:0001890!5.46e-07!41;UBERON:0006240!5.46e-07!41;UBERON:0002020!5.96e-07!34;UBERON:0003528!5.96e-07!34;UBERON:0002346!7.51e-07!90|ontology_enrichment_uberon_v019=UBERON:0001737;2.59e-23;9!UBERON:0001557;2.59e-23;9!UBERON:0000178;2.95e-08;15!UBERON:0000179;2.95e-08;15!UBERON:0000463;2.95e-08;15!UBERON:0001875;9.00e-08;2!UBERON:0006514;9.00e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.00e-23,9;UBERON:0001557,1.63e-10,19;UBERON:0000178,3.18e-08,15;UBERON:0000179,3.18e-08,15;UBERON:0000463,3.18e-08,15;UBERON:0001875,1.63e-07,2;UBERON:0006514,1.63e-07,2;UBERON:0001049,2.36e-07,56;UBERON:0005068,2.36e-07,56;UBERON:0006241,2.36e-07,56;UBERON:0007135,2.36e-07,56;UBERON:0002021,8.48e-07,5|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,1.09499540058307,0.125542639594803,0.229240217243854,0.410502947249729,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.863077176966451,0.256160706529101,0.47296445977717,0,1.29096936716765,0,0.941211697713023,0,0,0,0,0.639337125799041,0.659702600373432,0.199463657621632,0.426224750532694,1.16083695451434,0.56738522469114,0.622822248995575,0.75374599577023,1.0429658368404,0.434377689410233,0.605399502633369,0,1.26584954976354,0.845021145247767,0.212604299965044,0.209658645508376,0.336985893439485,0.450530678524519,0.803627933485401,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0.724232594804119,0,0.973269740605272,0.189069634328136,0.221729397462564,0.527008714158756,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0.358779271377724,0,0,0,0,0,0,0,0.0974370051611986,0.504867548488229,0.184099797284599,0,0,0,0.339121184620975,0.386521706326594,0,0.286804595389004,0,0.132529768321485,0.348581828608555,0.621966330092223,0.756962552626885,2.18986415445498,0,0,0,0.928735856063958,0,1.0647612003586,1.51726221070292,1.20505514941741,1.10293972732394,1.96091499683166,0.474541238222193,2.29213223872279,1.96221465125346,1.53898862778556,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,2.57545848628462,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0,0.0895585227028483,0.581267877027924,0,0,0.44024217006613,1.65862492432618,0.288239906833923,0.88369703398466,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,1.32969058292435,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0.197030760201927,0.215627574859517,0,1.52456774533478,0,0.773288812777695,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0.604780586659361,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.804269605718038,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0.241718899183244,0.40101294060657,0.828728900423067,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0.984043937099117,0.650756789328606,0,0.183138929636687,0.082509499920588,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0.5800667756569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1273793591026,0|short_description=p7@SPECC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=92521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30615 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002gww.2_5end | |||
|description=CAGE_peak_7_at_SPECC1_5end | |||
|id=chr17:20107643..20107658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.56e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-11!115;UBERON:0005743!8.86e-11!86;UBERON:0001049!2.00e-10!57;UBERON:0005068!2.00e-10!57;UBERON:0006241!2.00e-10!57;UBERON:0007135!2.00e-10!57;UBERON:0001017!6.57e-10!82;UBERON:0000073!6.89e-09!94;UBERON:0001016!6.89e-09!94;UBERON:0002616!1.25e-07!59;UBERON:0001737!1.64e-07!9;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0000955!1.96e-07!69;UBERON:0006238!1.96e-07!69;UBERON:0003080!2.26e-07!42;UBERON:0002780!5.46e-07!41;UBERON:0001890!5.46e-07!41;UBERON:0006240!5.46e-07!41;UBERON:0002020!5.96e-07!34;UBERON:0003528!5.96e-07!34;UBERON:0002346!7.51e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.59e-23;9!UBERON:0001557;2.59e-23;9!UBERON:0000178;2.95e-08;15!UBERON:0000179;2.95e-08;15!UBERON:0000463;2.95e-08;15!UBERON:0001875;9.00e-08;2!UBERON:0006514;9.00e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.00e-23,9;UBERON:0001557,1.63e-10,19;UBERON:0000178,3.18e-08,15;UBERON:0000179,3.18e-08,15;UBERON:0000463,3.18e-08,15;UBERON:0001875,1.63e-07,2;UBERON:0006514,1.63e-07,2;UBERON:0001049,2.36e-07,56;UBERON:0005068,2.36e-07,56;UBERON:0006241,2.36e-07,56;UBERON:0007135,2.36e-07,56;UBERON:0002021,8.48e-07,5 | |||
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| |||
|short_description=p7@SPECC1 | |||
}} |
Revision as of 12:34, 11 September 2013
Short description: | p7@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SPECC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002gww.2_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.00e-23 | 9 |
upper respiratory tract | 1.63e-10 | 19 |
blood | 3.18e-08 | 15 |
haemolymphatic fluid | 3.18e-08 | 15 |
organism substance | 3.18e-08 | 15 |
globus pallidus | 1.63e-07 | 2 |
pallidum | 1.63e-07 | 2 |
neural tube | 2.36e-07 | 56 |
neural rod | 2.36e-07 | 56 |
future spinal cord | 2.36e-07 | 56 |
neural keel | 2.36e-07 | 56 |
occipital lobe | 8.48e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.