FFCP PHASE1:Hg19::chr17:1394912..1394935,-: Difference between revisions
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{{FFCP | 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3092,0.261906694481422,3.76675410273223,1.92212912082159,0.202612753855184,0,0.413373593002368,0.380494861163441,0,4.38606213485746,1.48863353516788,0,4.85497225030462,0.535701835878287,0,0,0,1.50794029276486,0.115233987555779,0.514464028312255,0.271878931907327,0.131545547125698,6.02788588508238,0.889851215136553,1.72684804271131,0.314231179832004,1.12108865325516,2.73947616152849,1.07963795609311,1.43325506366115,2.00134323694638,0.158013611732727,1.51113852978563,1.04314963381548,5.61197955311177,1.24329698497822,1.87790324803345,2.76503864725637,3.01159151174194,0.828324005113957,1.02256085710989,0,2.06196181689645,1.24082554265728,0,1.90154234056247,1.47225350422864,0.853425474875886,0.647428837187895,0.821302454849976,3.4794432940146,1.45713297917742,1.40363678077263,2.18845852677505,0.356760272332706,0.90356865631168,0.439762066981716,1.05673990496671,2.2380505851304,0.437119121007915,1.88126918544609,3.18692818280077,2.82811856521951,0,0.594092800654172,2.113278637917,7.98657439032739,1.03382309777839,1.4180735354187,0.199882311849858,2.32120120187355,1.76447435857846,0.401206833445841,2.92134555298607,3.21110498383179,0.430018749454354,0.315543124386369,0.203974470572744,1.30905207102113,1.0580536810308,7.06790534516827,2.77305377178851,4.75889218336168,0.504665699340316,0.327796715891087,0.886889507080059,1.22386595690378,0,0.459474497674225,0,0.303114792872958,0.535928260312357,0,0.103432995861895,2.13233981900981,1.42838658878244,0.387533459016037,0.434523000071005,4.59740636580515,1.2729431655633,1.41482032270754,0.870866991587845,0.684466602170562,0.740872583160463,2.15166616178029,1.99596213927608,0.89543595472072,1.17400080465487,9.653614114347,4.04213409479641,0,1.95586310692586,2.44137706989443,3.32878387092756,2.41528552309231,0.320568492303233|short_description=p4@MYO1C}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7597 | |||
|TSSclassifier=S | |||
|UniProt=O00159 | |||
|association_with_transcript=36bp_to_ENST00000361007,NM_033375,uc002fso.2_5end | |||
|coexpression_cluster_id=C3604 | |||
|description=CAGE_peak_4_at_MYO1C_5end | |||
|id=chr17:1394912..1394935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.99e-26!180;CL:0000057!3.34e-17!75;CL:0000220!5.43e-15!246;CL:0002321!2.13e-14!248;CL:0000183!6.30e-13!59;CL:0000222!1.36e-12!119;CL:0000680!2.94e-12!57;CL:0000056!2.94e-12!57;CL:0000355!2.94e-12!57;CL:0000187!1.42e-11!54;CL:0000192!2.63e-10!42;CL:0000514!2.63e-10!42;CL:0000548!1.02e-09!679;CL:0000004!1.02e-09!679;CL:0000255!1.02e-09!679;CL:0002620!3.43e-09!23;CL:0000012!5.06e-09!682;CL:0000393!5.20e-09!60;CL:0000211!5.20e-09!60;CL:0000066!3.56e-08!254;CL:0002371!1.81e-07!591;CL:0000136!1.86e-07!15;CL:0000359!2.67e-07!32;CL:0000144!4.33e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.86e-09;23!CL:0000192;9.03e-09;43!CL:0000187;5.53e-08;55!CL:0000359;1.21e-07;32!CL:0000136;1.53e-07;13!CL:0000057;1.62e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.26e-19,76;CL:0000680,1.58e-13,58;CL:0000056,1.58e-13,58;CL:0000355,1.58e-13,58;CL:0000187,8.70e-13,55;CL:0000222,9.12e-12,121;CL:0002321,1.04e-11,250;CL:0000192,2.00e-11,43;CL:0000514,2.00e-11,43;CL:0002620,8.52e-10,23;CL:0000393,1.77e-09,61;CL:0000211,1.77e-09,61;CL:0000359,6.81e-08,32;CL:0000136,1.33e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;9.03e-09;43!CL:0000355;4.52e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002097;5.98e-09;41!UBERON:0003102;1.36e-08;50!UBERON:0002199;2.20e-08;46!UBERON:0002416;2.20e-08;46 | |||
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| |||
|short_description=p4@MYO1C | |||
}} |
Revision as of 12:17, 11 September 2013
Short description: | p4@MYO1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MYO1C_5end |
Coexpression cluster: | C3604_Mesenchymal_Alveolar_Renal_Hair_Fibroblast_Hepatic_Smooth |
Association with transcript: | 36bp_to_ENST00000361007, NM_033375, uc002fso.2_5end |
EntrezGene: | MYO1C |
HGNC: | 7597 |
UniProt: | O00159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.26e-19 | 76 |
muscle precursor cell | 1.58e-13 | 58 |
myoblast | 1.58e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.58e-13 | 58 |
muscle cell | 8.70e-13 | 55 |
mesodermal cell | 9.12e-12 | 121 |
embryonic cell | 1.04e-11 | 250 |
smooth muscle cell | 2.00e-11 | 43 |
smooth muscle myoblast | 2.00e-11 | 43 |
skin fibroblast | 8.52e-10 | 23 |
electrically responsive cell | 1.77e-09 | 61 |
electrically active cell | 1.77e-09 | 61 |
vascular associated smooth muscle cell | 6.81e-08 | 32 |
fat cell | 1.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.13e-19 | 160 |
entire embryonic mesenchyme | 2.13e-19 | 160 |
trunk | 2.58e-18 | 199 |
epithelial vesicle | 1.29e-17 | 78 |
multilaminar epithelium | 2.84e-16 | 83 |
trunk mesenchyme | 1.47e-15 | 122 |
somite | 2.32e-15 | 71 |
presomitic mesoderm | 2.32e-15 | 71 |
presumptive segmental plate | 2.32e-15 | 71 |
dermomyotome | 2.32e-15 | 71 |
trunk paraxial mesoderm | 2.32e-15 | 71 |
dense mesenchyme tissue | 2.64e-15 | 73 |
surface structure | 3.38e-15 | 99 |
paraxial mesoderm | 9.30e-15 | 72 |
presumptive paraxial mesoderm | 9.30e-15 | 72 |
muscle tissue | 5.36e-13 | 64 |
musculature | 5.36e-13 | 64 |
musculature of body | 5.36e-13 | 64 |
skeletal muscle tissue | 9.42e-13 | 62 |
striated muscle tissue | 9.42e-13 | 62 |
myotome | 9.42e-13 | 62 |
skin of body | 1.09e-11 | 41 |
integument | 1.27e-11 | 46 |
integumental system | 1.27e-11 | 46 |
unilaminar epithelium | 4.12e-10 | 148 |
epithelial tube | 1.25e-09 | 117 |
subdivision of trunk | 7.06e-08 | 112 |
cell layer | 2.55e-07 | 309 |
epithelium | 4.21e-07 | 306 |
splanchnic layer of lateral plate mesoderm | 4.33e-07 | 83 |
endoderm-derived structure | 7.66e-07 | 160 |
endoderm | 7.66e-07 | 160 |
presumptive endoderm | 7.66e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.