FFCP PHASE1:Hg19::chr16:84228961..84228982,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C41|description=CAGE_peak_at_chr16:84228961..84228982,+|id=chr16:84228961..84228982,+|ontology_enrichment_celltype=CL:0002586!2.45e-34!3;CL:0000149!6.11e-26!4;CL:0000147!5.10e-13!14|ontology_enrichment_celltype_v019=CL:0002586;6.39e-53;3!CL:0000149;4.94e-40;4!CL:0000147;2.82e-12;14|ontology_enrichment_celltype_v019_2=CL:0002586,6.39e-53,3;CL:0000149,4.94e-40,4;CL:0000147,2.82e-12,14|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3|ontology_enrichment_disease=DOID:178!2.20e-12!1;DOID:326!2.20e-12!1;DOID:3978!2.20e-12!1;DOID:3394!2.20e-12!1;DOID:5844!2.20e-12!1;DOID:114!8.06e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000966!2.09e-36!5;UBERON:0005388!2.09e-36!5;UBERON:0001802!2.09e-36!5;UBERON:0001781!2.45e-34!3;UBERON:0001782!2.45e-34!3;UBERON:0005424!2.45e-34!3;UBERON:0000020!2.53e-17!23;UBERON:0001032!1.37e-16!24;UBERON:0004456!1.37e-16!24;UBERON:0000970!3.97e-14!20;UBERON:0002104!1.88e-13!21;UBERON:0002022!4.81e-12!1;UBERON:0007625!8.10e-10!11;UBERON:0000019!8.66e-10!19;UBERON:0000047!8.66e-10!19;UBERON:0004088!8.66e-10!19;UBERON:0003072!8.66e-10!19;UBERON:0003071!8.66e-10!19;UBERON:0004128!8.66e-10!19;UBERON:0001456!7.12e-09!21;UBERON:0000007!6.42e-07!2|ontology_enrichment_uberon_v019=UBERON:0000966;4.09e-71;5!UBERON:0005388;4.09e-71;5!UBERON:0001802;4.09e-71;5!UBERON:0001781;6.39e-53;3!UBERON:0001782;6.39e-53;3!UBERON:0000970;3.67e-32;20!UBERON:0002104;1.13e-30;21!UBERON:0000020;4.37e-28;23!UBERON:0001032;5.93e-27;24!UBERON:0004456;5.93e-27;24!UBERON:0000019;1.68e-19;19!UBERON:0000047;1.68e-19;19!UBERON:0004088;1.68e-19;19!UBERON:0010230;1.68e-19;19!UBERON:0001456;9.85e-18;21!UBERON:0007625;2.51e-15;11!UBERON:0000033;3.61e-08;50!UBERON:0001444;4.81e-07;48|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.82e-59,6;UBERON:0005388,1.82e-59,6;UBERON:0001802,1.82e-59,6;UBERON:0001782,6.39e-53,3;UBERON:0005424,6.39e-53,3;UBERON:0001781,4.94e-40,4;UBERON:0000970,1.13e-30,21;UBERON:0002104,1.13e-30,21;UBERON:0000020,5.93e-27,24;UBERON:0001032,5.93e-27,24;UBERON:0004456,5.93e-27,24;UBERON:0000019,1.42e-18,20;UBERON:0000047,1.42e-18,20;UBERON:0010312,1.42e-18,20;UBERON:0004088,1.42e-18,20;UBERON:0010230,1.42e-18,20;UBERON:0003072,1.42e-18,20;UBERON:0004128,1.42e-18,20;UBERON:0003071,1.42e-18,20;UBERON:0001456,5.72e-17,22;UBERON:0007625,2.51e-15,11;UBERON:0005085,2.68e-12,31;UBERON:0001444,4.54e-08,49;UBERON:0000033,3.76e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8809022244904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2265187650474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:84228961..84228982,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr16:84228961..84228982,+ | |||
|id=chr16:84228961..84228982,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.45e-34!3;CL:0000149!6.11e-26!4;CL:0000147!5.10e-13!14 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.39e-53;3!CL:0000149;4.94e-40;4!CL:0000147;2.82e-12;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.39e-53,3;CL:0000149,4.94e-40,4;CL:0000147,2.82e-12,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease=DOID:178!2.20e-12!1;DOID:326!2.20e-12!1;DOID:3978!2.20e-12!1;DOID:3394!2.20e-12!1;DOID:5844!2.20e-12!1;DOID:114!8.06e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!2.09e-36!5;UBERON:0005388!2.09e-36!5;UBERON:0001802!2.09e-36!5;UBERON:0001781!2.45e-34!3;UBERON:0001782!2.45e-34!3;UBERON:0005424!2.45e-34!3;UBERON:0000020!2.53e-17!23;UBERON:0001032!1.37e-16!24;UBERON:0004456!1.37e-16!24;UBERON:0000970!3.97e-14!20;UBERON:0002104!1.88e-13!21;UBERON:0002022!4.81e-12!1;UBERON:0007625!8.10e-10!11;UBERON:0000019!8.66e-10!19;UBERON:0000047!8.66e-10!19;UBERON:0004088!8.66e-10!19;UBERON:0003072!8.66e-10!19;UBERON:0003071!8.66e-10!19;UBERON:0004128!8.66e-10!19;UBERON:0001456!7.12e-09!21;UBERON:0000007!6.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.09e-71;5!UBERON:0005388;4.09e-71;5!UBERON:0001802;4.09e-71;5!UBERON:0001781;6.39e-53;3!UBERON:0001782;6.39e-53;3!UBERON:0000970;3.67e-32;20!UBERON:0002104;1.13e-30;21!UBERON:0000020;4.37e-28;23!UBERON:0001032;5.93e-27;24!UBERON:0004456;5.93e-27;24!UBERON:0000019;1.68e-19;19!UBERON:0000047;1.68e-19;19!UBERON:0004088;1.68e-19;19!UBERON:0010230;1.68e-19;19!UBERON:0001456;9.85e-18;21!UBERON:0007625;2.51e-15;11!UBERON:0000033;3.61e-08;50!UBERON:0001444;4.81e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.82e-59,6;UBERON:0005388,1.82e-59,6;UBERON:0001802,1.82e-59,6;UBERON:0001782,6.39e-53,3;UBERON:0005424,6.39e-53,3;UBERON:0001781,4.94e-40,4;UBERON:0000970,1.13e-30,21;UBERON:0002104,1.13e-30,21;UBERON:0000020,5.93e-27,24;UBERON:0001032,5.93e-27,24;UBERON:0004456,5.93e-27,24;UBERON:0000019,1.42e-18,20;UBERON:0000047,1.42e-18,20;UBERON:0010312,1.42e-18,20;UBERON:0004088,1.42e-18,20;UBERON:0010230,1.42e-18,20;UBERON:0003072,1.42e-18,20;UBERON:0004128,1.42e-18,20;UBERON:0003071,1.42e-18,20;UBERON:0001456,5.72e-17,22;UBERON:0007625,2.51e-15,11;UBERON:0005085,2.68e-12,31;UBERON:0001444,4.54e-08,49;UBERON:0000033,3.76e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.328014645699706,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8809022244904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2265187650474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:84228961..84228982,+ | |||
}} |
Revision as of 11:48, 11 September 2013
Short description: | p@chr16:84228961..84228982, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:84228961..84228982, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.39e-53 | 3 |
visual pigment cell | 4.94e-40 | 4 |
pigment cell | 2.82e-12 | 14 |
Ontology term | p-value | n |
---|---|---|
retina | 1.82e-59 | 6 |
photoreceptor array | 1.82e-59 | 6 |
posterior segment of eyeball | 1.82e-59 | 6 |
pigmented layer of retina | 6.39e-53 | 3 |
presumptive retinal pigmented epithelium | 6.39e-53 | 3 |
layer of retina | 4.94e-40 | 4 |
eye | 1.13e-30 | 21 |
visual system | 1.13e-30 | 21 |
sense organ | 5.93e-27 | 24 |
sensory system | 5.93e-27 | 24 |
entire sense organ system | 5.93e-27 | 24 |
camera-type eye | 1.42e-18 | 20 |
simple eye | 1.42e-18 | 20 |
immature eye | 1.42e-18 | 20 |
ocular region | 1.42e-18 | 20 |
eyeball of camera-type eye | 1.42e-18 | 20 |
optic cup | 1.42e-18 | 20 |
optic vesicle | 1.42e-18 | 20 |
eye primordium | 1.42e-18 | 20 |
face | 5.72e-17 | 22 |
pigment epithelium of eye | 2.51e-15 | 11 |
ectodermal placode | 2.68e-12 | 31 |
subdivision of head | 4.54e-08 | 49 |
head | 3.76e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.