FFCP PHASE1:Hg19::chr16:812227..812239,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10232|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7371|TSSclassifier=W|UniProt=Q13421|association_with_transcript=-354bp_to_ENST00000382862_5end|coexpression_cluster_id=C68|description=CAGE_peak_10_at_MSLN_5end|id=chr16:812227..812239,+|ontology_enrichment_celltype=CL:0002537!8.85e-08!5|ontology_enrichment_celltype_v019=CL:0002537;8.54e-31;5!CL:0000349;1.73e-14;19!CL:0002541;6.50e-07;3!CL:0002178;7.70e-07;3|ontology_enrichment_celltype_v019_2=CL:0002537,7.72e-31,5;CL:0000349,1.67e-14,19;CL:0002541,6.50e-07,3;CL:0002178,7.70e-07,3|ontology_enrichment_development_v019=UBERON:0006965;1.71e-09;2|ontology_enrichment_disease=DOID:3493!6.56e-09!2;DOID:305!1.28e-08!106|ontology_enrichment_disease_v019=DOID:3493;9.92e-34;2|ontology_enrichment_disease_v019_2=DOID:3493,7.10e-34,2|ontology_enrichment_uberon=UBERON:0001737!2.53e-18!9;UBERON:0001557!2.36e-13!19;UBERON:0005631!1.92e-12!14;UBERON:0000158!1.92e-12!14;UBERON:0000077!3.66e-12!130;UBERON:0008947!3.51e-11!38;UBERON:0003258!3.51e-11!38;UBERON:0004119!1.88e-10!169;UBERON:0000925!1.88e-10!169;UBERON:0006595!1.88e-10!169;UBERON:0000065!3.99e-10!53;UBERON:0003127!8.23e-09!2;UBERON:0001041!1.12e-08!98;UBERON:0001987!1.27e-08!4;UBERON:0004340!1.27e-08!4;UBERON:0003124!1.36e-08!7;UBERON:0002294!2.19e-08!7;UBERON:0001173!2.19e-08!7;UBERON:0004912!2.19e-08!7;UBERON:0001007!3.80e-08!155;UBERON:0001555!3.80e-08!155;UBERON:0007026!3.80e-08!155;UBERON:0000341!4.02e-08!2;UBERON:0004921!5.42e-08!129;UBERON:0004185!5.42e-08!129;UBERON:0001004!9.83e-08!72;UBERON:0000072!3.88e-07!46;UBERON:0000478!8.23e-07!24|ontology_enrichment_uberon_v019=UBERON:0005631;3.72e-27;10!UBERON:0000158;3.72e-27;10!UBERON:0000305;3.21e-22;7!UBERON:0000478;1.54e-11;24!UBERON:0003127;1.22e-09;2!UBERON:0003124;6.50e-07;3!UBERON:0000920;6.50e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.99e-22,7;UBERON:0004871,1.46e-19,8;UBERON:0005631,1.51e-19,14;UBERON:0000158,1.51e-19,14;UBERON:0000478,1.50e-11,24;UBERON:0003127,1.33e-09,2;UBERON:0000920,6.50e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.110293972732394,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,40.5865624054073,2.37571744666111,50.3743551442741,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0,0,0,0,0,13.3980487087406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0.447421727191169,2.25745537315059,1.95068679971631,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.471464371102113,2.00822175099494,0.99798106963804,0,0.213454691755431,0,0,0,0,0,0,0,0|short_description=p10@MSLN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=W | |||
|UniProt=Q13421 | |||
|association_with_transcript=-354bp_to_ENST00000382862_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_10_at_MSLN_5end | |||
|id=chr16:812227..812239,+ | |||
|ontology_enrichment_celltype=CL:0002537!8.85e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;8.54e-31;5!CL:0000349;1.73e-14;19!CL:0002541;6.50e-07;3!CL:0002178;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.72e-31,5;CL:0000349,1.67e-14,19;CL:0002541,6.50e-07,3;CL:0002178,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.71e-09;2 | |||
|ontology_enrichment_disease=DOID:3493!6.56e-09!2;DOID:305!1.28e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.92e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.10e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.53e-18!9;UBERON:0001557!2.36e-13!19;UBERON:0005631!1.92e-12!14;UBERON:0000158!1.92e-12!14;UBERON:0000077!3.66e-12!130;UBERON:0008947!3.51e-11!38;UBERON:0003258!3.51e-11!38;UBERON:0004119!1.88e-10!169;UBERON:0000925!1.88e-10!169;UBERON:0006595!1.88e-10!169;UBERON:0000065!3.99e-10!53;UBERON:0003127!8.23e-09!2;UBERON:0001041!1.12e-08!98;UBERON:0001987!1.27e-08!4;UBERON:0004340!1.27e-08!4;UBERON:0003124!1.36e-08!7;UBERON:0002294!2.19e-08!7;UBERON:0001173!2.19e-08!7;UBERON:0004912!2.19e-08!7;UBERON:0001007!3.80e-08!155;UBERON:0001555!3.80e-08!155;UBERON:0007026!3.80e-08!155;UBERON:0000341!4.02e-08!2;UBERON:0004921!5.42e-08!129;UBERON:0004185!5.42e-08!129;UBERON:0001004!9.83e-08!72;UBERON:0000072!3.88e-07!46;UBERON:0000478!8.23e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.72e-27;10!UBERON:0000158;3.72e-27;10!UBERON:0000305;3.21e-22;7!UBERON:0000478;1.54e-11;24!UBERON:0003127;1.22e-09;2!UBERON:0003124;6.50e-07;3!UBERON:0000920;6.50e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.99e-22,7;UBERON:0004871,1.46e-19,8;UBERON:0005631,1.51e-19,14;UBERON:0000158,1.51e-19,14;UBERON:0000478,1.50e-11,24;UBERON:0003127,1.33e-09,2;UBERON:0000920,6.50e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.110293972732394,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,40.5865624054073,2.37571744666111,50.3743551442741,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0,0,0,0,0,13.3980487087406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0.447421727191169,2.25745537315059,1.95068679971631,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.471464371102113,2.00822175099494,0.99798106963804,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p10@MSLN | |||
}} |
Revision as of 11:42, 11 September 2013
Short description: | p10@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -354bp_to_ENST00000382862_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.72e-31 | 5 |
extraembryonic cell | 1.67e-14 | 19 |
chorionic membrane mesenchymal stem cell | 6.50e-07 | 3 |
epithelial cell of stomach | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.99e-22 | 7 |
somatic layer of lateral plate mesoderm | 1.46e-19 | 8 |
extraembryonic membrane | 1.51e-19 | 14 |
membranous layer | 1.51e-19 | 14 |
extraembryonic structure | 1.50e-11 | 24 |
open tracheal system trachea | 1.33e-09 | 2 |
egg chorion | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.10e-34 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.