FFCP PHASE1:Hg19::chr16:67429759..67429769,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C150|description=CAGE_peak_at_chr16:67429759..67429769,-|id=chr16:67429759..67429769,-|ontology_enrichment_celltype=CL:0000242!9.98e-16!2;CL:0000312!8.58e-07!5|ontology_enrichment_celltype_v019=CL:0000123;1.00e-50;2!CL:0000242;1.00e-50;2!CL:0000312;5.17e-21;5!CL:0000240;1.08e-17;6!CL:0000311;1.08e-17;6!CL:0000079;1.08e-17;6!CL:0000237;1.08e-17;6!CL:0002535;9.40e-14;2!CL:0000362;3.85e-12;9!CL:0002159;3.83e-08;14|ontology_enrichment_celltype_v019_2=CL:0000242,8.82e-51,2;CL:0000312,4.92e-21,5;CL:0000240,1.03e-17,6;CL:0000311,1.03e-17,6;CL:0000079,1.03e-17,6;CL:0000237,1.03e-17,6;CL:0000036,1.03e-17,6;CL:0000357,1.03e-17,6;CL:0000114,1.03e-17,6;CL:0002535,9.40e-14,2;CL:0000362,3.74e-12,9;CL:0002159,3.76e-08,14|ontology_enrichment_development_v019=CL:0000357;1.08e-17;6!CL:0000114;1.08e-17;6|ontology_enrichment_disease=DOID:4362!2.08e-13!5;DOID:0050619!1.75e-08!1;DOID:1357!1.75e-08!1;DOID:3119!2.08e-08!14;DOID:3151!2.17e-08!1;DOID:3149!2.17e-08!1;DOID:162!5.41e-07!235;DOID:14566!9.01e-07!239|ontology_enrichment_disease_v019=DOID:4362;8.98e-21;5!DOID:3119;1.52e-16;14|ontology_enrichment_disease_v019_2=DOID:4362,8.98e-21,5;DOID:3119,1.48e-16,14|ontology_enrichment_uberon=UBERON:0000002!2.93e-11!6;UBERON:0001560!2.93e-11!6;UBERON:0001723!2.47e-10!3;UBERON:0001033!2.47e-10!3;UBERON:0010056!2.47e-10!3;UBERON:0001764!1.75e-08!1;UBERON:0001825!1.75e-08!1;UBERON:0000997!5.43e-08!1;UBERON:0005056!5.43e-08!1;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1|ontology_enrichment_uberon_v019=UBERON:0000002;1.71e-17;6!UBERON:0001560;1.71e-17;6!UBERON:0006955;9.40e-14;2!UBERON:0004801;9.40e-14;2!UBERON:0001003;1.17e-07;15!UBERON:0007376;1.17e-07;15!UBERON:0000995;8.59e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.71e-17,6;UBERON:0001560,1.71e-17,6;UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0001003,1.15e-07,15;UBERON:0007376,1.15e-07,15;UBERON:0007383,1.15e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82640722538051,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799238438328521,0,0,1.54435498075768,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0,0,5.62001886968258,4.92731497276806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,2.10545517115895,1.39265542612958,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:67429759..67429769,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr16:67429759..67429769,- | |||
|id=chr16:67429759..67429769,- | |||
|ontology_enrichment_celltype=CL:0000242!9.98e-16!2;CL:0000312!8.58e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.00e-50;2!CL:0000242;1.00e-50;2!CL:0000312;5.17e-21;5!CL:0000240;1.08e-17;6!CL:0000311;1.08e-17;6!CL:0000079;1.08e-17;6!CL:0000237;1.08e-17;6!CL:0002535;9.40e-14;2!CL:0000362;3.85e-12;9!CL:0002159;3.83e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.82e-51,2;CL:0000312,4.92e-21,5;CL:0000240,1.03e-17,6;CL:0000311,1.03e-17,6;CL:0000079,1.03e-17,6;CL:0000237,1.03e-17,6;CL:0000036,1.03e-17,6;CL:0000357,1.03e-17,6;CL:0000114,1.03e-17,6;CL:0002535,9.40e-14,2;CL:0000362,3.74e-12,9;CL:0002159,3.76e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;1.08e-17;6!CL:0000114;1.08e-17;6 | |||
|ontology_enrichment_disease=DOID:4362!2.08e-13!5;DOID:0050619!1.75e-08!1;DOID:1357!1.75e-08!1;DOID:3119!2.08e-08!14;DOID:3151!2.17e-08!1;DOID:3149!2.17e-08!1;DOID:162!5.41e-07!235;DOID:14566!9.01e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4362;8.98e-21;5!DOID:3119;1.52e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,8.98e-21,5;DOID:3119,1.48e-16,14 | |||
|ontology_enrichment_uberon=UBERON:0000002!2.93e-11!6;UBERON:0001560!2.93e-11!6;UBERON:0001723!2.47e-10!3;UBERON:0001033!2.47e-10!3;UBERON:0010056!2.47e-10!3;UBERON:0001764!1.75e-08!1;UBERON:0001825!1.75e-08!1;UBERON:0000997!5.43e-08!1;UBERON:0005056!5.43e-08!1;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;1.71e-17;6!UBERON:0001560;1.71e-17;6!UBERON:0006955;9.40e-14;2!UBERON:0004801;9.40e-14;2!UBERON:0001003;1.17e-07;15!UBERON:0007376;1.17e-07;15!UBERON:0000995;8.59e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,1.71e-17,6;UBERON:0001560,1.71e-17,6;UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0001003,1.15e-07,15;UBERON:0007376,1.15e-07,15;UBERON:0007383,1.15e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82640722538051,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799238438328521,0,0,1.54435498075768,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0,0,5.62001886968258,4.92731497276806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,2.10545517115895,1.39265542612958,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:67429759..67429769,- | |||
}} |
Revision as of 11:11, 11 September 2013
Short description: | p@chr16:67429759..67429769, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:67429759..67429769, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.82e-51 | 2 |
keratinocyte | 4.92e-21 | 5 |
stratified squamous epithelial cell | 1.03e-17 | 6 |
keratin accumulating cell | 1.03e-17 | 6 |
stratified epithelial cell | 1.03e-17 | 6 |
keratinizing barrier epithelial cell | 1.03e-17 | 6 |
epithelial fate stem cell | 1.03e-17 | 6 |
stratified epithelial stem cell | 1.03e-17 | 6 |
surface ectodermal cell | 1.03e-17 | 6 |
epithelial cell of cervix | 9.40e-14 | 2 |
epidermal cell | 3.74e-12 | 9 |
general ecto-epithelial cell | 3.76e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 1.71e-17 | 6 |
neck of organ | 1.71e-17 | 6 |
uterine epithelium | 9.40e-14 | 2 |
cervix epithelium | 9.40e-14 | 2 |
skin epidermis | 1.15e-07 | 15 |
outer epithelium | 1.15e-07 | 15 |
enveloping layer of ectoderm | 1.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 8.98e-21 | 5 |
gastrointestinal system cancer | 1.48e-16 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.