FFCP PHASE1:Hg19::chr16:57662596..57662613,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4512 | |||
|TSSclassifier=W | |||
|UniProt=Q9Y653,B3KQV4,B4DR54 | |||
|association_with_transcript=177bp_to_ENST00000388812,ENST00000388813,ENST00000456916,ENST00000538815,NM_001145771,NM_001145772,NM_001145773,NM_201524,NM_201525,uc002emd.2,uc002eme.2,uc002emf.2,uc010vhs.1,uc010vht.1_5end | |||
|coexpression_cluster_id=C2380 | |||
|description=CAGE_peak_2_at_GPR56_5end | |||
|id=chr16:57662596..57662613,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.21e-13!24;CL:0000115!3.26e-12!35;CL:0002078!5.96e-11!44;CL:0000071!1.41e-10!18;CL:0002546!1.41e-10!18;CL:0000213!2.30e-10!57;CL:0000215!2.30e-10!57;CL:0000075!7.86e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.59e-14;24!CL:0000071;5.67e-11;18!CL:0000115;6.65e-11;36!CL:0002078;2.10e-07;45!CL:0000213;7.38e-07;58!CL:0000215;7.38e-07;58!CL:0000075;9.23e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.90e-14,24;CL:0000115,1.43e-12,36;CL:0002078,2.62e-11,45;CL:0000071,6.05e-11,18;CL:0002546,6.05e-11,18;CL:0000213,2.51e-10,58;CL:0000215,2.51e-10,58 | |||
|ontology_enrichment_development_v019=CL:0002546;5.67e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-25!115;UBERON:0003075!2.64e-20!86;UBERON:0007284!2.64e-20!86;UBERON:0000477!3.56e-19!286;UBERON:0001049!4.04e-19!57;UBERON:0005068!4.04e-19!57;UBERON:0006241!4.04e-19!57;UBERON:0007135!4.04e-19!57;UBERON:0005743!3.26e-18!86;UBERON:0004111!8.11e-18!241;UBERON:0001017!1.32e-17!82;UBERON:0000025!1.82e-17!194;UBERON:0002346!3.09e-17!90;UBERON:0002616!2.25e-16!59;UBERON:0000955!2.54e-16!69;UBERON:0006238!2.54e-16!69;UBERON:0000033!2.68e-15!123;UBERON:0000153!9.46e-15!129;UBERON:0007811!9.46e-15!129;UBERON:0000073!1.26e-14!94;UBERON:0001016!1.26e-14!94;UBERON:0003056!2.99e-14!61;UBERON:0003080!3.91e-14!42;UBERON:0002780!9.58e-14!41;UBERON:0001890!9.58e-14!41;UBERON:0006240!9.58e-14!41;UBERON:0000119!1.87e-13!312;UBERON:0000483!4.07e-13!309;UBERON:0002020!2.58e-12!34;UBERON:0003528!2.58e-12!34;UBERON:0001893!4.96e-12!34;UBERON:0002791!1.06e-11!33;UBERON:0001869!3.65e-11!32;UBERON:0004121!5.14e-11!169;UBERON:0001986!1.41e-10!18;UBERON:0004638!1.41e-10!18;UBERON:0004852!1.41e-10!18;UBERON:0000924!1.44e-09!173;UBERON:0006601!1.44e-09!173;UBERON:0000467!3.16e-08!625;UBERON:0000487!3.26e-08!22;UBERON:0000480!5.39e-08!626;UBERON:0000956!5.42e-08!25;UBERON:0000203!5.42e-08!25;UBERON:0000481!6.31e-08!347;UBERON:0002619!1.33e-07!22 | |||
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| |||
|short_description=p2@GPR56 | |||
}} |
Revision as of 10:55, 11 September 2013
Short description: | p2@GPR56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GPR56_5end |
Coexpression cluster: | C2380_Melanocyte_mesothelioma_Renal_Neural_renal_Endothelial_Hepatic |
Association with transcript: | 177bp_to_ENST00000388812, ENST00000388813, ENST00000456916, ENST00000538815, NM_001145771, NM_001145772, NM_001145773, NM_201524, NM_201525, uc002emd.2, uc002eme.2, uc002emf.2, uc010vhs.1, uc010vht.1_5end |
EntrezGene: | GPR56 |
HGNC: | 4512 |
UniProt: | Q9Y653B3KQV4B4DR54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.90e-14 | 24 |
endothelial cell | 1.43e-12 | 36 |
meso-epithelial cell | 2.62e-11 | 45 |
blood vessel endothelial cell | 6.05e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.05e-11 | 18 |
lining cell | 2.51e-10 | 58 |
barrier cell | 2.51e-10 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.