FFCP PHASE1:Hg19::chr16:28634522..28634552,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6817|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11453|TSSclassifier=W|UniProt=|association_with_transcript=313bp_to_uc002dqm.2,uc002dqn.2,uc002dqo.2,uc002dqp.2_5end|description=CAGE_peak_6_at_SULT1A1_5end|id=chr16:28634522..28634552,-|ontology_enrichment_celltype=CL:0000860!9.20e-18!45;CL:0002057!7.54e-16!42;CL:0002194!1.66e-13!63;CL:0000576!1.66e-13!63;CL:0000040!1.66e-13!63;CL:0000559!1.66e-13!63;CL:0000839!2.51e-13!70;CL:0000766!4.71e-13!76;CL:0000557!6.70e-13!71;CL:0002009!1.33e-12!65;CL:0000763!1.88e-10!112;CL:0000049!1.88e-10!112;CL:0002087!9.33e-07!119|ontology_enrichment_celltype_v019=CL:0000860;1.57e-08;33!CL:0002057;1.57e-08;33|ontology_enrichment_celltype_v019_2=CL:0000860,3.06e-10,42;CL:0002057,3.06e-10,42;CL:0000473,2.84e-08,48;CL:0000234,2.84e-08,48|ontology_enrichment_development_v019=UBERON:0006601;2.10e-10;82!CL:0002057;9.03e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.00e-37!115;UBERON:0001049!1.13e-29!57;UBERON:0005068!1.13e-29!57;UBERON:0006241!1.13e-29!57;UBERON:0007135!1.13e-29!57;UBERON:0002616!2.80e-24!59;UBERON:0003080!2.50e-23!42;UBERON:0002780!1.07e-22!41;UBERON:0001890!1.07e-22!41;UBERON:0006240!1.07e-22!41;UBERON:0000955!9.29e-20!69;UBERON:0006238!9.29e-20!69;UBERON:0002020!6.95e-19!34;UBERON:0003528!6.95e-19!34;UBERON:0001893!1.41e-18!34;UBERON:0001017!1.59e-18!82;UBERON:0005743!2.83e-18!86;UBERON:0003075!5.60e-18!86;UBERON:0007284!5.60e-18!86;UBERON:0002791!8.35e-18!33;UBERON:0001869!1.30e-17!32;UBERON:0002346!2.44e-17!90;UBERON:0002619!7.49e-16!22;UBERON:0000956!7.69e-15!25;UBERON:0000203!7.69e-15!25;UBERON:0000073!1.74e-14!94;UBERON:0001016!1.74e-14!94;UBERON:0001950!1.84e-14!20;UBERON:0003056!2.69e-13!61;UBERON:0002371!8.08e-11!80;UBERON:0002390!2.07e-10!102;UBERON:0003061!2.07e-10!102;UBERON:0000153!6.72e-10!129;UBERON:0007811!6.72e-10!129;UBERON:0000033!6.81e-10!123;UBERON:0000062!1.46e-09!511;UBERON:0001474!5.80e-09!86;UBERON:0002193!2.32e-08!112;UBERON:0003076!1.58e-07!15;UBERON:0003057!1.58e-07!15;UBERON:0001871!3.50e-07!7;UBERON:0002298!5.55e-07!8;UBERON:0001737!9.27e-07!9|ontology_enrichment_uberon_v019=UBERON:0002619;1.74e-24;22!UBERON:0003528;8.45e-23;34!UBERON:0002020;8.45e-23;34!UBERON:0001950;4.08e-22;20!UBERON:0000073;4.20e-22;53!UBERON:0002616;4.20e-22;53!UBERON:0001869;4.34e-22;32!UBERON:0002791;7.56e-22;32!UBERON:0002780;7.83e-22;41!UBERON:0001890;7.83e-22;41!UBERON:0000956;6.78e-21;25!UBERON:0000203;6.78e-21;25!UBERON:0001893;7.81e-21;34!UBERON:0000955;4.22e-15;68!UBERON:0001017;1.12e-14;75!UBERON:0007023;5.74e-12;114!UBERON:0001016;1.58e-11;83!UBERON:0004733;3.07e-10;12!UBERON:0002028;3.07e-10;12!UBERON:0000200;3.39e-10;6!UBERON:0002298;1.84e-09;6!UBERON:0004732;2.80e-09;13!UBERON:0001737;3.25e-09;9!UBERON:0001557;3.25e-09;9!UBERON:0001871;2.17e-08;6!UBERON:0000349;5.28e-08;5!UBERON:0002420;1.25e-07;9!UBERON:0007245;1.25e-07;9!UBERON:0010009;1.25e-07;9!UBERON:0010011;1.25e-07;9!UBERON:0000454;1.25e-07;9!UBERON:0001894;1.31e-07;7!UBERON:0000125;1.59e-07;9!UBERON:0002308;1.59e-07;9!UBERON:0011216;3.90e-07;132!UBERON:0002680;4.94e-07;9!UBERON:0001895;4.94e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.16e-44,56;UBERON:0005068,3.16e-44,56;UBERON:0006241,3.16e-44,56;UBERON:0007135,3.16e-44,56;UBERON:0000073,1.72e-40,53;UBERON:0002616,1.72e-40,53;UBERON:0007023,4.48e-35,114;UBERON:0001017,2.28e-32,81;UBERON:0000955,8.39e-32,68;UBERON:0006238,8.39e-32,68;UBERON:0002780,2.82e-31,41;UBERON:0001890,2.82e-31,41;UBERON:0003080,2.82e-31,41;UBERON:0006240,2.82e-31,41;UBERON:0003528,1.06e-27,34;UBERON:0002020,1.06e-27,34;UBERON:0001016,1.16e-27,89;UBERON:0003075,3.99e-27,82;UBERON:0007284,3.99e-27,82;UBERON:0001869,1.92e-25,32;UBERON:0001893,2.31e-25,34;UBERON:0002346,3.29e-25,86;UBERON:0002791,5.11e-25,32;UBERON:0002619,5.42e-25,22;UBERON:0001950,1.79e-22,20;UBERON:0000956,2.47e-21,25;UBERON:0000203,2.47e-21,25;UBERON:0010371,1.02e-20,104;UBERON:0003056,4.14e-19,61;UBERON:0010314,2.29e-15,132;UBERON:0003076,8.36e-14,15;UBERON:0003057,8.36e-14,15;UBERON:0011216,1.63e-13,223;UBERON:0004121,1.05e-12,171;UBERON:0000924,1.05e-12,171;UBERON:0006601,1.05e-12,171;UBERON:0000200,1.54e-10,6;UBERON:0004733,3.00e-10,12;UBERON:0002028,3.00e-10,12;UBERON:0007277,3.00e-10,12;UBERON:0002298,1.80e-09,6;UBERON:0004732,2.74e-09,13;UBERON:0001737,5.34e-09,9;UBERON:0001871,1.51e-08,6;UBERON:0000349,1.99e-08,5;UBERON:0002420,6.22e-08,9;UBERON:0007245,6.22e-08,9;UBERON:0010009,6.22e-08,9;UBERON:0010011,6.22e-08,9;UBERON:0000454,6.22e-08,9;UBERON:0000125,8.62e-08,9;UBERON:0002308,8.62e-08,9;UBERON:0001894,2.50e-07,7;UBERON:0006222,2.50e-07,7;UBERON:0002680,4.95e-07,9;UBERON:0001895,4.95e-07,9;UBERON:0010092,4.95e-07,9|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,1.18009283054671,0.383829398097213,0.61926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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6817 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11453 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=313bp_to_uc002dqm.2,uc002dqn.2,uc002dqo.2,uc002dqp.2_5end | |||
|description=CAGE_peak_6_at_SULT1A1_5end | |||
|id=chr16:28634522..28634552,- | |||
|ontology_enrichment_celltype=CL:0000860!9.20e-18!45;CL:0002057!7.54e-16!42;CL:0002194!1.66e-13!63;CL:0000576!1.66e-13!63;CL:0000040!1.66e-13!63;CL:0000559!1.66e-13!63;CL:0000839!2.51e-13!70;CL:0000766!4.71e-13!76;CL:0000557!6.70e-13!71;CL:0002009!1.33e-12!65;CL:0000763!1.88e-10!112;CL:0000049!1.88e-10!112;CL:0002087!9.33e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-08;33!CL:0002057;1.57e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.06e-10,42;CL:0002057,3.06e-10,42;CL:0000473,2.84e-08,48;CL:0000234,2.84e-08,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.10e-10;82!CL:0002057;9.03e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;1.74e-24;22!UBERON:0003528;8.45e-23;34!UBERON:0002020;8.45e-23;34!UBERON:0001950;4.08e-22;20!UBERON:0000073;4.20e-22;53!UBERON:0002616;4.20e-22;53!UBERON:0001869;4.34e-22;32!UBERON:0002791;7.56e-22;32!UBERON:0002780;7.83e-22;41!UBERON:0001890;7.83e-22;41!UBERON:0000956;6.78e-21;25!UBERON:0000203;6.78e-21;25!UBERON:0001893;7.81e-21;34!UBERON:0000955;4.22e-15;68!UBERON:0001017;1.12e-14;75!UBERON:0007023;5.74e-12;114!UBERON:0001016;1.58e-11;83!UBERON:0004733;3.07e-10;12!UBERON:0002028;3.07e-10;12!UBERON:0000200;3.39e-10;6!UBERON:0002298;1.84e-09;6!UBERON:0004732;2.80e-09;13!UBERON:0001737;3.25e-09;9!UBERON:0001557;3.25e-09;9!UBERON:0001871;2.17e-08;6!UBERON:0000349;5.28e-08;5!UBERON:0002420;1.25e-07;9!UBERON:0007245;1.25e-07;9!UBERON:0010009;1.25e-07;9!UBERON:0010011;1.25e-07;9!UBERON:0000454;1.25e-07;9!UBERON:0001894;1.31e-07;7!UBERON:0000125;1.59e-07;9!UBERON:0002308;1.59e-07;9!UBERON:0011216;3.90e-07;132!UBERON:0002680;4.94e-07;9!UBERON:0001895;4.94e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.16e-44,56;UBERON:0005068,3.16e-44,56;UBERON:0006241,3.16e-44,56;UBERON:0007135,3.16e-44,56;UBERON:0000073,1.72e-40,53;UBERON:0002616,1.72e-40,53;UBERON:0007023,4.48e-35,114;UBERON:0001017,2.28e-32,81;UBERON:0000955,8.39e-32,68;UBERON:0006238,8.39e-32,68;UBERON:0002780,2.82e-31,41;UBERON:0001890,2.82e-31,41;UBERON:0003080,2.82e-31,41;UBERON:0006240,2.82e-31,41;UBERON:0003528,1.06e-27,34;UBERON:0002020,1.06e-27,34;UBERON:0001016,1.16e-27,89;UBERON:0003075,3.99e-27,82;UBERON:0007284,3.99e-27,82;UBERON:0001869,1.92e-25,32;UBERON:0001893,2.31e-25,34;UBERON:0002346,3.29e-25,86;UBERON:0002791,5.11e-25,32;UBERON:0002619,5.42e-25,22;UBERON:0001950,1.79e-22,20;UBERON:0000956,2.47e-21,25;UBERON:0000203,2.47e-21,25;UBERON:0010371,1.02e-20,104;UBERON:0003056,4.14e-19,61;UBERON:0010314,2.29e-15,132;UBERON:0003076,8.36e-14,15;UBERON:0003057,8.36e-14,15;UBERON:0011216,1.63e-13,223;UBERON:0004121,1.05e-12,171;UBERON:0000924,1.05e-12,171;UBERON:0006601,1.05e-12,171;UBERON:0000200,1.54e-10,6;UBERON:0004733,3.00e-10,12;UBERON:0002028,3.00e-10,12;UBERON:0007277,3.00e-10,12;UBERON:0002298,1.80e-09,6;UBERON:0004732,2.74e-09,13;UBERON:0001737,5.34e-09,9;UBERON:0001871,1.51e-08,6;UBERON:0000349,1.99e-08,5;UBERON:0002420,6.22e-08,9;UBERON:0007245,6.22e-08,9;UBERON:0010009,6.22e-08,9;UBERON:0010011,6.22e-08,9;UBERON:0000454,6.22e-08,9;UBERON:0000125,8.62e-08,9;UBERON:0002308,8.62e-08,9;UBERON:0001894,2.50e-07,7;UBERON:0006222,2.50e-07,7;UBERON:0002680,4.95e-07,9;UBERON:0001895,4.95e-07,9;UBERON:0010092,4.95e-07,9 | |||
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| |||
|short_description=p6@SULT1A1 | |||
}} |
Revision as of 09:55, 11 September 2013
Short description: | p6@SULT1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SULT1A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 313bp_to_uc002dqm.2, uc002dqn.2, uc002dqo.2, uc002dqp.2_5end |
EntrezGene: | SULT1A1 |
HGNC: | 11453 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.06e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-10 | 42 |
defensive cell | 2.84e-08 | 48 |
phagocyte | 2.84e-08 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.