FFCP PHASE1:Hg19::chr16:22385801..22385834,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1039|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1799|TSSclassifier=S|UniProt=Q01850|association_with_transcript=103bp_to_ENST00000268383,NM_001802,uc002dkn.2_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_CDR2_5end|id=chr16:22385801..22385834,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;2.82e-21;1!CL:0002625;2.82e-21;1!CL:0000216;2.82e-21;1!CL:0000228;5.71e-21;1!CL:0002372;5.71e-21;1!CL:0000771;3.52e-11;2|ontology_enrichment_celltype_v019_2=CL:0000511,2.82e-21,1;CL:0002625,2.82e-21,1;CL:0000216,2.82e-21,1;CL:0000228,3.45e-21,1;CL:0002372,3.45e-21,1;CL:0000771,3.02e-11,2|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;3.03e-23;8!UBERON:0001136;2.82e-21;1!UBERON:0001343;2.82e-21;1!UBERON:0004910;2.82e-21;1!UBERON:0004813;2.82e-21;1!UBERON:0003135;4.11e-17;11!UBERON:0004909;2.47e-11;2!UBERON:0000991;2.83e-09;21!UBERON:0003101;7.02e-09;22!UBERON:0000079;7.02e-09;22!UBERON:0002114;7.02e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.03e-23,8;UBERON:0001136,2.82e-21,1;UBERON:0001343,2.82e-21,1;UBERON:0004910,2.82e-21,1;UBERON:0005154,2.82e-21,1;UBERON:0005295,2.82e-21,1;UBERON:0004813,2.82e-21,1;UBERON:0005297,2.82e-21,1;UBERON:0005294,2.82e-21,1;UBERON:0010141,2.82e-21,1;UBERON:0005891,2.82e-21,1;UBERON:0003135,4.11e-17,11;UBERON:0004909,2.47e-11,2;UBERON:0000991,2.83e-09,21;UBERON:0009196,2.83e-09,21;UBERON:0009117,2.83e-09,21;UBERON:0005564,2.83e-09,21;UBERON:0004176,7.02e-09,22;UBERON:0003101,7.02e-09,22;UBERON:0000079,7.02e-09,22;UBERON:0002114,7.76e-08,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,14.7351459934927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.292311015483596,0,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0.446342914883745,0,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0,0,0.276697269872462,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0.318593534327405,0,0,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0.157723490002507,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,1.0580536810308,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,27.6592248496574,47.9655792979559,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@CDR2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1799 | |||
|TSSclassifier=S | |||
|UniProt=Q01850 | |||
|association_with_transcript=103bp_to_ENST00000268383,NM_001802,uc002dkn.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_CDR2_5end | |||
|id=chr16:22385801..22385834,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.82e-21;1!CL:0002625;2.82e-21;1!CL:0000216;2.82e-21;1!CL:0000228;5.71e-21;1!CL:0002372;5.71e-21;1!CL:0000771;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.82e-21,1;CL:0002625,2.82e-21,1;CL:0000216,2.82e-21,1;CL:0000228,3.45e-21,1;CL:0002372,3.45e-21,1;CL:0000771,3.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.03e-23;8!UBERON:0001136;2.82e-21;1!UBERON:0001343;2.82e-21;1!UBERON:0004910;2.82e-21;1!UBERON:0004813;2.82e-21;1!UBERON:0003135;4.11e-17;11!UBERON:0004909;2.47e-11;2!UBERON:0000991;2.83e-09;21!UBERON:0003101;7.02e-09;22!UBERON:0000079;7.02e-09;22!UBERON:0002114;7.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.03e-23,8;UBERON:0001136,2.82e-21,1;UBERON:0001343,2.82e-21,1;UBERON:0004910,2.82e-21,1;UBERON:0005154,2.82e-21,1;UBERON:0005295,2.82e-21,1;UBERON:0004813,2.82e-21,1;UBERON:0005297,2.82e-21,1;UBERON:0005294,2.82e-21,1;UBERON:0010141,2.82e-21,1;UBERON:0005891,2.82e-21,1;UBERON:0003135,4.11e-17,11;UBERON:0004909,2.47e-11,2;UBERON:0000991,2.83e-09,21;UBERON:0009196,2.83e-09,21;UBERON:0009117,2.83e-09,21;UBERON:0005564,2.83e-09,21;UBERON:0004176,7.02e-09,22;UBERON:0003101,7.02e-09,22;UBERON:0000079,7.02e-09,22;UBERON:0002114,7.76e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,14.7351459934927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.292311015483596,0,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0.446342914883745,0,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0,0,0.276697269872462,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0.318593534327405,0,0,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0.318004350653419,0.157723490002507,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,1.0580536810308,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,27.6592248496574,47.9655792979559,0,0,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CDR2 | |||
}} |
Revision as of 09:41, 11 September 2013
Short description: | p3@CDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CDR2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 103bp_to_ENST00000268383, NM_001802, uc002dkn.2_5end |
EntrezGene: | CDR2 |
HGNC: | 1799 |
UniProt: | Q01850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.82e-21 | 1 |
seminiferous tubule epithelial cell | 2.82e-21 | 1 |
Sertoli cell | 2.82e-21 | 1 |
multinucleate cell | 3.45e-21 | 1 |
myotube | 3.45e-21 | 1 |
eosinophil | 3.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.03e-23 | 8 |
mesothelium | 2.82e-21 | 1 |
seminiferous tubule of testis | 2.82e-21 | 1 |
epithelium of male gonad | 2.82e-21 | 1 |
epithelial cord | 2.82e-21 | 1 |
sex cord | 2.82e-21 | 1 |
seminiferous tubule epithelium | 2.82e-21 | 1 |
testis sex cord | 2.82e-21 | 1 |
genital ridge | 2.82e-21 | 1 |
primitive sex cord of indifferent gonad | 2.82e-21 | 1 |
coelomic epithelium | 2.82e-21 | 1 |
male reproductive organ | 4.11e-17 | 11 |
epithelium of gonad | 2.47e-11 | 2 |
gonad | 2.83e-09 | 21 |
indifferent external genitalia | 2.83e-09 | 21 |
indifferent gonad | 2.83e-09 | 21 |
gonad primordium | 2.83e-09 | 21 |
external genitalia | 7.02e-09 | 22 |
male organism | 7.02e-09 | 22 |
male reproductive system | 7.02e-09 | 22 |
duodenum | 7.76e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.