FFCP PHASE1:Hg19::chr15:85144229..85144273,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54993|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20994|TSSclassifier=S|UniProt=F8W6Y9,F5H1K4,Q7Z7L9,F5H2D8,F5H789|association_with_transcript=0bp_to_ENST00000334141,ENST00000358472,ENST00000442073,ENST00000448803,ENST00000502939,ENST00000546148,ENST00000546275,NM_001007072,NM_017894,NM_181877,uc002bkp.2,uc002bkq.2,uc002bkr.2,uc010bmz.1,uc010bna.2_5end|description=CAGE_peak_1_at_ZSCAN2_5end|id=chr15:85144229..85144273,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000449;1.22e-07;15!CL:1000497;3.74e-07;17!CL:0002518;3.74e-07;17|ontology_enrichment_celltype_v019_2=CL:1000449,1.50e-07,15;CL:1000497,4.55e-07,17;CL:0002518,4.55e-07,17;CL:0000115,9.27e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.02e-07!27;UBERON:0003918!6.02e-07!27;UBERON:0005095!6.02e-07!27;UBERON:0007687!6.02e-07!27|ontology_enrichment_uberon_v019=UBERON:0002113;2.55e-08;24!UBERON:0011143;2.55e-08;24!UBERON:0006554;7.21e-08;30!UBERON:0001008;7.21e-08;30!UBERON:0006555;1.22e-07;15!UBERON:0004819;1.22e-07;15!UBERON:0001285;1.22e-07;15!UBERON:0007684;1.22e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.06e-07,26;UBERON:0003918,1.06e-07,26;UBERON:0011143,1.06e-07,26;UBERON:0005095,1.06e-07,26;UBERON:0007687,1.06e-07,26;UBERON:0004211,1.50e-07,15;UBERON:0009773,1.50e-07,15;UBERON:0001231,1.50e-07,15;UBERON:0001285,1.50e-07,15;UBERON:0007684,1.50e-07,15;UBERON:0004208,1.50e-07,15;UBERON:0006555,1.61e-07,16;UBERON:0004819,1.61e-07,16|phase1_expression=3.08853244759946,3.42560838225573,2.11431606143957,5.00366491765652,4.91657203870017,2.61701557230111,2.53299878168311,1.89515962028049,3.91778442299758,7.12628415854376,18.8406315352555,8.08233076881637,8.96807725976742,7.54974753056284,9.61052389610956,2.6893005858071,6.62963980826375,7.30310090387373,4.87932798790507,5.54044761345546,8.77202972350288,6.26909442956176,1.43117993565528,3.83248390204076,2.88748071068046,4.20273731613732,4.43343183029707,4.32909297225236,1.57345710739562,3.0706351847777,2.94150634300544,2.75826367343678,4.2168828628955,2.58827807116751,3.02122082263176,3.2698923472107,8.22081230137572,4.43196326825502,1.80490002723128,4.55722828503289,4.03047853631864,0.647787332037959,4.12120908214698,2.03557534291391,1.88937971844405,3.39617685662943,0.929716147622738,2.05583944010913,0.929119112685311,0.575384784644301,3.07392847834921,2.36482229888585,1.37898272294647,0.645484683583826,6.77132432971709,1.31769637679823,1.63743690034707,2.02251136000576,2.75475503133812,1.60464513538047,2.55734850319616,1.9791078011203,2.39356389145958,2.55734850319616,1.45104619314292,3.40431134814684,1.86846674698672,1.50749199154046,4.17186334736161,2.17188844705117,2.42159801053347,1.47311054395026,1.89877432464531,2.74631872205524,3.4016687994407,6.28975936525128,3.59451619668784,4.50530678524519,2.57160938715328,4.84521664360123,3.77941686678271,3.83594722905731,0,3.82297027883492,5.33705552318133,4.69403244823158,4.00395987036012,6.8970292794538,7.27149360063348,4.77026877267682,4.55370375287559,5.28513470433845,7.64546456250458,18.5039860010636,3.92355994087075,6.32121803460185,2.55722701147983,4.32311839024081,1.85041349099558,6.18590032945509,5.21475626613745,3.78758244587787,3.89653456815823,6.57321695622524,3.82987679717288,5.53834736459053,5.95768500283034,6.40456598628376,6.89314542067355,5.09757504271396,8.0141505157896,4.05724320029073,5.19002971067211,5.35081656179426,4.18142095219907,4.41906436520508,4.59864592322305,2.74901956386104,4.30133476433155,6.37130828648194,2.60433381542567,3.8018081777935,3.312652619711,4.60751800155906,3.74792179657038,5.91943130110042,3.28451198768419,3.22570789159572,3.20928234940209,4.05508330871837,2.43806866313962,6.03630773733273,3.19656404608826,2.89151321907653,3.00802746381534,5.06962816362883,6.36228757640879,2.43317435151318,5.86115866417221,6.87361132133948,7.99296549807447,5.50112117090393,1.82147644146271,1.85392221392215,2.92092654289215,1.74129737299267,3.0580330919339,8.34717185068697,6.86393892936153,7.80060752792086,4.57153536943422,9.46258054616737,5.55424802572151,5.08777147731609,3.35599548967925,7.70330517432189,3.55291443112578,5.16833518338658,7.47109151642091,4.68608857870538,5.63961043952806,4.56163263431108,6.10155143870424,4.77962004449629,8.1014194788176,4.55428614248807,5.61323431565425,5.85579698513276,6.13266549863533,9.49265659568129,7.14486801328588,1.31780417436063,0,0.872188104285069,4.47274756525787,3.41902381494365,4.10468460520978,4.30254931123221,3.90135220418193,4.48542080113846,5.33744978648525,8.38669664618344,3.7345324247972,4.98429486657846,3.75962377160955,4.54072282934794,3.45705554687999,6.56100009134631,1.5608003841516,4.56377457235559,2.24173020827702,4.69737994575059,4.53244244230768,5.19667984798319,3.67477508258808,4.54486974053541,3.30642499762449,3.564008571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178,3.55172977239385,6.97343661215412,4.11556187000656,3.3752029925721,5.02769887731206,3.92381028639305,10.9579046461139,5.61411737168416,3.34426181520935,4.57449882730601,12.0090344916872,2.55731135809876,4.17259853526191,3.20684545892101,4.76597177574985,4.60939888153665,3.45629830907046,7.31386509994472,2.95830001826413,3.40853619036631,2.54032230114557,0.22910686854405,5.27350855629344,6.68877257284203,3.91494011292273,1.86485443868962,2.31644057466312,1.29485767437579,2.36124455769368,12.7579587447202,6.31424290976881,3.04121302500737,15.120258912264,17.7190935258577,5.30846585583112,20.229055081159,3.62310824560016,2.62392137567012,6.77534637562268,11.2876151126765,5.14811475683202,9.42706188406504,3.33724394095407,3.26751040359795,2.9585900930838,2.71883383500507,4.60521198101283,6.31687302141056,3.59788161329744,3.03541695629618,1.05868461514708,2.24675826729671,4.3820183294791,10.0920442348999,3.58348957878628,10.8862377913297,4.28346388202763,27.9264441817842,6.34832208618481,2.97596014533401,4.15958065768276,5.19151874548547,4.16349201955761,2.513108155165,6.58832205259472,4.79347499787314,1.87052183685892,3.58390108185895,2.25636785363138,4.09204970378493,5.35928260312357,2.48750831837634,3.72358785102823,2.34557380091079,7.37999737537595,13.1115486967092,11.2975980018461,4.70953822838576,3.6278880218554,3.84022659020617,2.61260097476354,2.05339980651169,4.3105313929336,3.37094365345579,3.99192427855216,5.69822880276822,2.98836568457603,3.8614456457388,2.60493086109102,2.34640942403454,5.25638209986326,7.73102738799903,5.99181096766961,6.84330898209489,5.44966436915496|short_description=p1@ZSCAN2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20994 | |||
|TSSclassifier=S | |||
|UniProt=F8W6Y9,F5H1K4,Q7Z7L9,F5H2D8,F5H789 | |||
|association_with_transcript=0bp_to_ENST00000334141,ENST00000358472,ENST00000442073,ENST00000448803,ENST00000502939,ENST00000546148,ENST00000546275,NM_001007072,NM_017894,NM_181877,uc002bkp.2,uc002bkq.2,uc002bkr.2,uc010bmz.1,uc010bna.2_5end | |||
|description=CAGE_peak_1_at_ZSCAN2_5end | |||
|id=chr15:85144229..85144273,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.22e-07;15!CL:1000497;3.74e-07;17!CL:0002518;3.74e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.50e-07,15;CL:1000497,4.55e-07,17;CL:0002518,4.55e-07,17;CL:0000115,9.27e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.02e-07!27;UBERON:0003918!6.02e-07!27;UBERON:0005095!6.02e-07!27;UBERON:0007687!6.02e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.55e-08;24!UBERON:0011143;2.55e-08;24!UBERON:0006554;7.21e-08;30!UBERON:0001008;7.21e-08;30!UBERON:0006555;1.22e-07;15!UBERON:0004819;1.22e-07;15!UBERON:0001285;1.22e-07;15!UBERON:0007684;1.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.06e-07,26;UBERON:0003918,1.06e-07,26;UBERON:0011143,1.06e-07,26;UBERON:0005095,1.06e-07,26;UBERON:0007687,1.06e-07,26;UBERON:0004211,1.50e-07,15;UBERON:0009773,1.50e-07,15;UBERON:0001231,1.50e-07,15;UBERON:0001285,1.50e-07,15;UBERON:0007684,1.50e-07,15;UBERON:0004208,1.50e-07,15;UBERON:0006555,1.61e-07,16;UBERON:0004819,1.61e-07,16 | |||
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| |||
|short_description=p1@ZSCAN2 | |||
}} |
Revision as of 08:37, 11 September 2013
Short description: | p1@ZSCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZSCAN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334141, ENST00000358472, ENST00000442073, ENST00000448803, ENST00000502939, ENST00000546148, ENST00000546275, NM_001007072, NM_017894, NM_181877, uc002bkp.2, uc002bkq.2, uc002bkr.2, uc010bmz.1, uc010bna.2_5end |
EntrezGene: | ZSCAN2 |
HGNC: | 20994 |
UniProt: | F8W6Y9F5H1K4Q7Z7L9F5H2D8F5H789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.50e-07 | 15 |
kidney cell | 4.55e-07 | 17 |
kidney epithelial cell | 4.55e-07 | 17 |
endothelial cell | 9.27e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.06e-07 | 26 |
kidney mesenchyme | 1.06e-07 | 26 |
upper urinary tract | 1.06e-07 | 26 |
kidney rudiment | 1.06e-07 | 26 |
kidney field | 1.06e-07 | 26 |
nephron epithelium | 1.50e-07 | 15 |
renal tubule | 1.50e-07 | 15 |
nephron tubule | 1.50e-07 | 15 |
nephron | 1.50e-07 | 15 |
uriniferous tubule | 1.50e-07 | 15 |
nephrogenic mesenchyme | 1.50e-07 | 15 |
excretory tube | 1.61e-07 | 16 |
kidney epithelium | 1.61e-07 | 16 |
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