FFCP PHASE1:Hg19::chr15:81589254..81589272,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3603|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5980|TSSclassifier=S|UniProt=Q14005,Q9UME6|association_with_transcript=0bp_to_ENST00000394652,NM_004513,uc002bgl.1_5end|coexpression_cluster_id=C57|description=CAGE_peak_2_at_IL16_5end|id=chr15:81589254..81589272,+|ontology_enrichment_celltype=CL:0000037!2.29e-71!172;CL:0000566!2.29e-71!172;CL:0000738!2.08e-66!140;CL:0002032!5.72e-66!165;CL:0000837!5.72e-66!165;CL:0000988!1.00e-64!182;CL:0002087!1.16e-57!119;CL:0002031!1.93e-55!124;CL:0000763!1.16e-36!112;CL:0000049!1.16e-36!112;CL:0000766!3.63e-34!76;CL:0000839!1.15e-28!70;CL:0000557!1.92e-28!71;CL:0002194!5.94e-28!63;CL:0000576!5.94e-28!63;CL:0000040!5.94e-28!63;CL:0000559!5.94e-28!63;CL:0002057!9.49e-28!42;CL:0002009!1.93e-27!65;CL:0000542!7.09e-26!53;CL:0000051!7.09e-26!53;CL:0000838!1.94e-25!52;CL:0000860!1.41e-24!45;CL:0000945!5.41e-14!24;CL:0000826!5.41e-14!24;CL:0000791!2.98e-12!18;CL:0000789!2.98e-12!18;CL:0002420!2.98e-12!18;CL:0002419!2.98e-12!18;CL:0000790!2.98e-12!18;CL:0000084!2.58e-11!25;CL:0000827!2.58e-11!25;CL:0000134!2.04e-10!358;CL:0000236!9.68e-10!14;CL:0002320!2.06e-09!365;CL:0000625!1.30e-08!11;CL:0000094!4.59e-07!8;CL:0002393!6.90e-07!9;CL:0002397!6.90e-07!9|ontology_enrichment_celltype_v019=CL:0000860;3.14e-25;33!CL:0002057;3.14e-25;33!CL:0000473;3.23e-24;39!CL:0000234;3.23e-24;39!CL:0000576;5.19e-21;48!CL:0002087;1.26e-19;104!CL:0000766;6.17e-19;69!CL:0000945;2.29e-17;24!CL:0000542;7.19e-17;53!CL:0000738;1.19e-16;136!CL:0000791;4.92e-15;18!CL:0000789;4.92e-15;18!CL:0002419;4.92e-15;18!CL:0000763;5.15e-13;100!CL:0000988;6.02e-13;177!CL:0000084;2.60e-11;25!CL:0000236;5.54e-11;13!CL:0000625;1.93e-10;11!CL:0000094;1.84e-08;8!CL:0000219;7.52e-07;193|ontology_enrichment_celltype_v019_2=CL:0000037,1.08e-81,168;CL:0000738,2.33e-81,136;CL:0002032,4.38e-75,161;CL:0000837,4.38e-75,161;CL:0000988,4.43e-75,177;CL:0002087,3.35e-72,115;CL:0002031,1.18e-67,120;CL:0000766,1.09e-45,72;CL:0000763,1.57e-41,108;CL:0000049,1.57e-41,108;CL:0000557,2.28e-38,67;CL:0000473,3.23e-38,48;CL:0000234,3.23e-38,48;CL:0002194,1.14e-37,59;CL:0000576,1.14e-37,59;CL:0000040,1.14e-37,59;CL:0000559,1.14e-37,59;CL:0002009,4.49e-37,61;CL:0000839,1.30e-36,66;CL:0000860,1.72e-34,42;CL:0002057,1.72e-34,42;CL:0000542,2.01e-29,53;CL:0000051,2.01e-29,53;CL:0000838,7.11e-29,52;CL:0000945,2.29e-17,24;CL:0000826,2.29e-17,24;CL:0000134,3.36e-17,354;CL:0002320,4.25e-16,361;CL:0000791,5.46e-15,18;CL:0000789,5.46e-15,18;CL:0002420,5.46e-15,18;CL:0002419,5.46e-15,18;CL:0000790,5.46e-15,18;CL:0000219,2.52e-12,386;CL:0000236,7.77e-12,14;CL:0000084,2.84e-11,25;CL:0000827,2.84e-11,25;CL:0000625,2.01e-10,11;CL:0000094,1.76e-08,8;CL:0002393,2.94e-08,9;CL:0002397,2.94e-08,9;CL:0000048,4.97e-08,427;CL:0000723,1.78e-07,433;CL:0000034,2.25e-07,441|ontology_enrichment_development_v019=CL:0002057;6.01e-25;42!CL:0000051;7.19e-17;53!CL:0000790;4.92e-15;18!CL:0000049;9.89e-12;108|ontology_enrichment_disease=DOID:2531!8.54e-08!51;DOID:0060083!8.54e-08!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.40e-34!102;UBERON:0003061!3.40e-34!102;UBERON:0002193!4.02e-31!112;UBERON:0002371!2.44e-23!80;UBERON:0001474!5.84e-20!86;UBERON:0002405!3.70e-19!115;UBERON:0007023!2.09e-16!115;UBERON:0004765!5.13e-14!101;UBERON:0001434!5.13e-14!101;UBERON:0002384!1.42e-08!375;UBERON:0003081!7.65e-08!216;UBERON:0000178!2.99e-07!15;UBERON:0000179!2.99e-07!15;UBERON:0000463!2.99e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-09;15!UBERON:0000179;3.53e-09;15!UBERON:0000463;3.53e-09;15!UBERON:0002390;4.78e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.98e-47,98;UBERON:0003061,5.98e-47,98;UBERON:0002193,9.23e-43,108;UBERON:0002405,3.38e-34,93;UBERON:0002371,1.96e-32,76;UBERON:0001474,1.83e-28,82;UBERON:0004765,4.82e-24,90;UBERON:0001434,1.37e-19,100;UBERON:0002384,1.29e-14,371;UBERON:0003081,1.92e-12,203;UBERON:0000178,3.31e-09,15;UBERON:0000179,3.31e-09,15;UBERON:0000463,3.31e-09,15;UBERON:0004177,2.31e-07,7;UBERON:0005057,2.31e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3127144784018,21.6745556147857,26.2894009587689,22.8151280572364,11.8987113410136,20.5905444010381,0,0,0,6.35231044758473,5.68676929949686,3.22960483268332,11.6339035791694,13.8375668754398,11.718587018656,2.01523926815932,4.53451132426571,3.09090681161024,18.6109745637843,36.6539665378145,21.10481332334,17.8970358417377,30.4264237136151,15.1756121738601,10.6446185159196,12.5518746199259,8.51336027598907,16.5477926753577,30.9832648120237,10.8341189275473,13.9299331261527,20.1950551042806,13.0339620978149,16.8346140803996,30.809186599305,21.0981251513684,14.1836059080288,13.1646014030277,9.80316926225197,4.06292934080018,8.5107783703671,5.60540024096017,9.2962006144995,20.3378338183879,12.1625753034865,6.05399502633369,15.4676607114777,5.69632297393592,16.0554017597076,9.56719349842696,10.6925909209272,11.794506270382,11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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5980 | |||
|TSSclassifier=S | |||
|UniProt=Q14005,Q9UME6 | |||
|association_with_transcript=0bp_to_ENST00000394652,NM_004513,uc002bgl.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_IL16_5end | |||
|id=chr15:81589254..81589272,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.29e-71!172;CL:0000566!2.29e-71!172;CL:0000738!2.08e-66!140;CL:0002032!5.72e-66!165;CL:0000837!5.72e-66!165;CL:0000988!1.00e-64!182;CL:0002087!1.16e-57!119;CL:0002031!1.93e-55!124;CL:0000763!1.16e-36!112;CL:0000049!1.16e-36!112;CL:0000766!3.63e-34!76;CL:0000839!1.15e-28!70;CL:0000557!1.92e-28!71;CL:0002194!5.94e-28!63;CL:0000576!5.94e-28!63;CL:0000040!5.94e-28!63;CL:0000559!5.94e-28!63;CL:0002057!9.49e-28!42;CL:0002009!1.93e-27!65;CL:0000542!7.09e-26!53;CL:0000051!7.09e-26!53;CL:0000838!1.94e-25!52;CL:0000860!1.41e-24!45;CL:0000945!5.41e-14!24;CL:0000826!5.41e-14!24;CL:0000791!2.98e-12!18;CL:0000789!2.98e-12!18;CL:0002420!2.98e-12!18;CL:0002419!2.98e-12!18;CL:0000790!2.98e-12!18;CL:0000084!2.58e-11!25;CL:0000827!2.58e-11!25;CL:0000134!2.04e-10!358;CL:0000236!9.68e-10!14;CL:0002320!2.06e-09!365;CL:0000625!1.30e-08!11;CL:0000094!4.59e-07!8;CL:0002393!6.90e-07!9;CL:0002397!6.90e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.14e-25;33!CL:0002057;3.14e-25;33!CL:0000473;3.23e-24;39!CL:0000234;3.23e-24;39!CL:0000576;5.19e-21;48!CL:0002087;1.26e-19;104!CL:0000766;6.17e-19;69!CL:0000945;2.29e-17;24!CL:0000542;7.19e-17;53!CL:0000738;1.19e-16;136!CL:0000791;4.92e-15;18!CL:0000789;4.92e-15;18!CL:0002419;4.92e-15;18!CL:0000763;5.15e-13;100!CL:0000988;6.02e-13;177!CL:0000084;2.60e-11;25!CL:0000236;5.54e-11;13!CL:0000625;1.93e-10;11!CL:0000094;1.84e-08;8!CL:0000219;7.52e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.08e-81,168;CL:0000738,2.33e-81,136;CL:0002032,4.38e-75,161;CL:0000837,4.38e-75,161;CL:0000988,4.43e-75,177;CL:0002087,3.35e-72,115;CL:0002031,1.18e-67,120;CL:0000766,1.09e-45,72;CL:0000763,1.57e-41,108;CL:0000049,1.57e-41,108;CL:0000557,2.28e-38,67;CL:0000473,3.23e-38,48;CL:0000234,3.23e-38,48;CL:0002194,1.14e-37,59;CL:0000576,1.14e-37,59;CL:0000040,1.14e-37,59;CL:0000559,1.14e-37,59;CL:0002009,4.49e-37,61;CL:0000839,1.30e-36,66;CL:0000860,1.72e-34,42;CL:0002057,1.72e-34,42;CL:0000542,2.01e-29,53;CL:0000051,2.01e-29,53;CL:0000838,7.11e-29,52;CL:0000945,2.29e-17,24;CL:0000826,2.29e-17,24;CL:0000134,3.36e-17,354;CL:0002320,4.25e-16,361;CL:0000791,5.46e-15,18;CL:0000789,5.46e-15,18;CL:0002420,5.46e-15,18;CL:0002419,5.46e-15,18;CL:0000790,5.46e-15,18;CL:0000219,2.52e-12,386;CL:0000236,7.77e-12,14;CL:0000084,2.84e-11,25;CL:0000827,2.84e-11,25;CL:0000625,2.01e-10,11;CL:0000094,1.76e-08,8;CL:0002393,2.94e-08,9;CL:0002397,2.94e-08,9;CL:0000048,4.97e-08,427;CL:0000723,1.78e-07,433;CL:0000034,2.25e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.01e-25;42!CL:0000051;7.19e-17;53!CL:0000790;4.92e-15;18!CL:0000049;9.89e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!8.54e-08!51;DOID:0060083!8.54e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.40e-34!102;UBERON:0003061!3.40e-34!102;UBERON:0002193!4.02e-31!112;UBERON:0002371!2.44e-23!80;UBERON:0001474!5.84e-20!86;UBERON:0002405!3.70e-19!115;UBERON:0007023!2.09e-16!115;UBERON:0004765!5.13e-14!101;UBERON:0001434!5.13e-14!101;UBERON:0002384!1.42e-08!375;UBERON:0003081!7.65e-08!216;UBERON:0000178!2.99e-07!15;UBERON:0000179!2.99e-07!15;UBERON:0000463!2.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-09;15!UBERON:0000179;3.53e-09;15!UBERON:0000463;3.53e-09;15!UBERON:0002390;4.78e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.98e-47,98;UBERON:0003061,5.98e-47,98;UBERON:0002193,9.23e-43,108;UBERON:0002405,3.38e-34,93;UBERON:0002371,1.96e-32,76;UBERON:0001474,1.83e-28,82;UBERON:0004765,4.82e-24,90;UBERON:0001434,1.37e-19,100;UBERON:0002384,1.29e-14,371;UBERON:0003081,1.92e-12,203;UBERON:0000178,3.31e-09,15;UBERON:0000179,3.31e-09,15;UBERON:0000463,3.31e-09,15;UBERON:0004177,2.31e-07,7;UBERON:0005057,2.31e-07,7 | |||
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| |||
|short_description=p2@IL16 | |||
}} |
Revision as of 08:33, 11 September 2013
Short description: | p2@IL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IL16_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000394652, NM_004513, uc002bgl.1_5end |
EntrezGene: | IL16 |
HGNC: | 5980 |
UniProt: | Q14005Q9UME6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.98e-47 | 98 |
blood island | 5.98e-47 | 98 |
hemolymphoid system | 9.23e-43 | 108 |
immune system | 3.38e-34 | 93 |
bone marrow | 1.96e-32 | 76 |
bone element | 1.83e-28 | 82 |
skeletal element | 4.82e-24 | 90 |
skeletal system | 1.37e-19 | 100 |
connective tissue | 1.29e-14 | 371 |
lateral plate mesoderm | 1.92e-12 | 203 |
blood | 3.31e-09 | 15 |
haemolymphatic fluid | 3.31e-09 | 15 |
organism substance | 3.31e-09 | 15 |
hemopoietic organ | 2.31e-07 | 7 |
immune organ | 2.31e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.