FFCP PHASE1:Hg19::chr15:79290559..79290569,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5923|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9875|TSSclassifier=S|UniProt=|association_with_transcript=38bp_to_ENST00000560943_5end|description=CAGE_peak_14_at_RASGRF1_5end|id=chr15:79290559..79290569,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000322;1.10e-09;3!CL:0002178;1.47e-09;3|ontology_enrichment_celltype_v019_2=CL:0000322,1.10e-09,3;CL:0002178,1.54e-09,3|ontology_enrichment_development_v019=UBERON:0008947;3.35e-14;29!UBERON:0001041;9.61e-14;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;7.30e-14;2!DOID:3493;1.14e-13;2!DOID:4468;1.46e-13;2|ontology_enrichment_disease_v019_2=DOID:3910,7.30e-14,2;DOID:3493,1.21e-13,2;DOID:4468,1.55e-13,2|ontology_enrichment_uberon=UBERON:0002171!1.60e-09!1;UBERON:0006518!1.60e-09!1;UBERON:0008949!1.60e-09!1;UBERON:0000101!1.60e-09!1;UBERON:0002167!1.60e-09!1;UBERON:0002426!3.31e-09!1;UBERON:0003831!3.31e-09!1;UBERON:0003898!3.31e-09!1;UBERON:0004830!3.31e-09!1;UBERON:0001774!3.31e-09!1;UBERON:0003830!3.31e-09!1;UBERON:0005175!3.31e-09!1;UBERON:0003897!3.31e-09!1;UBERON:0001103!3.31e-09!1;UBERON:0010084!3.31e-09!1;UBERON:0006834!3.88e-09!1;UBERON:0001301!4.19e-09!1;UBERON:0002372!9.17e-09!1;UBERON:0001961!9.17e-09!1;UBERON:0001744!9.17e-09!1;UBERON:0001735!9.17e-09!1;UBERON:0002465!2.24e-07!10|ontology_enrichment_uberon_v019=UBERON:0002171;2.16e-26;1!UBERON:0006518;2.16e-26;1!UBERON:0008949;2.16e-26;1!UBERON:0000101;2.16e-26;1!UBERON:0002167;2.16e-26;1!UBERON:0002048;1.49e-18;22!UBERON:0000117;1.49e-18;22!UBERON:0000171;1.49e-18;22!UBERON:0000170;1.49e-18;22!UBERON:0004903;7.30e-14;2!UBERON:0002173;7.30e-14;2!UBERON:0002186;7.30e-14;2!UBERON:0005178;5.93e-11;34!UBERON:0002224;5.93e-11;34!UBERON:0004821;1.10e-09;3!UBERON:0007499;1.10e-09;3!UBERON:0003215;1.10e-09;3!UBERON:0010368;1.10e-09;3!UBERON:0009911;1.10e-09;3!UBERON:0002299;1.10e-09;3!UBERON:0006524;1.10e-09;3!UBERON:0008874;1.10e-09;3!UBERON:0002169;1.10e-09;3!UBERON:0004894;1.10e-09;3!UBERON:0000065;2.77e-09;44!UBERON:0005181;1.71e-08;35!UBERON:0009856;1.40e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.16e-26,1;UBERON:0006518,2.16e-26,1;UBERON:0008949,2.16e-26,1;UBERON:0000101,2.16e-26,1;UBERON:0002167,2.16e-26,1;UBERON:0002048,1.45e-18,22;UBERON:0000117,1.45e-18,22;UBERON:0000171,1.45e-18,22;UBERON:0000170,1.45e-18,22;UBERON:0005597,1.45e-18,22;UBERON:0000118,1.45e-18,22;UBERON:0004903,7.30e-14,2;UBERON:0002173,7.30e-14,2;UBERON:0002186,7.30e-14,2;UBERON:0005178,3.45e-12,34;UBERON:0002224,3.45e-12,34;UBERON:0005181,7.47e-12,35;UBERON:0005153,3.09e-11,37;UBERON:0008947,5.95e-11,38;UBERON:0003258,5.95e-11,38;UBERON:0004821,1.10e-09,3;UBERON:0003215,1.10e-09,3;UBERON:0010368,1.10e-09,3;UBERON:0009911,1.10e-09,3;UBERON:0002299,1.10e-09,3;UBERON:0006524,1.10e-09,3;UBERON:0008874,1.10e-09,3;UBERON:0002169,1.10e-09,3;UBERON:0004894,1.10e-09,3;UBERON:0005157,6.22e-09,47;UBERON:0000915,4.14e-08,52;UBERON:0000065,8.01e-08,54;UBERON:0001041,2.23e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,6.25099522974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88326013932776,4.71612915298998,7.87054205159671,0,5.53312569314244,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9875 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000560943_5end | |||
|description=CAGE_peak_14_at_RASGRF1_5end | |||
|id=chr15:79290559..79290569,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.10e-09;3!CL:0002178;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.10e-09,3;CL:0002178,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.35e-14;29!UBERON:0001041;9.61e-14;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;7.30e-14;2!DOID:3493;1.14e-13;2!DOID:4468;1.46e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,7.30e-14,2;DOID:3493,1.21e-13,2;DOID:4468,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0002171!1.60e-09!1;UBERON:0006518!1.60e-09!1;UBERON:0008949!1.60e-09!1;UBERON:0000101!1.60e-09!1;UBERON:0002167!1.60e-09!1;UBERON:0002426!3.31e-09!1;UBERON:0003831!3.31e-09!1;UBERON:0003898!3.31e-09!1;UBERON:0004830!3.31e-09!1;UBERON:0001774!3.31e-09!1;UBERON:0003830!3.31e-09!1;UBERON:0005175!3.31e-09!1;UBERON:0003897!3.31e-09!1;UBERON:0001103!3.31e-09!1;UBERON:0010084!3.31e-09!1;UBERON:0006834!3.88e-09!1;UBERON:0001301!4.19e-09!1;UBERON:0002372!9.17e-09!1;UBERON:0001961!9.17e-09!1;UBERON:0001744!9.17e-09!1;UBERON:0001735!9.17e-09!1;UBERON:0002465!2.24e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.16e-26;1!UBERON:0006518;2.16e-26;1!UBERON:0008949;2.16e-26;1!UBERON:0000101;2.16e-26;1!UBERON:0002167;2.16e-26;1!UBERON:0002048;1.49e-18;22!UBERON:0000117;1.49e-18;22!UBERON:0000171;1.49e-18;22!UBERON:0000170;1.49e-18;22!UBERON:0004903;7.30e-14;2!UBERON:0002173;7.30e-14;2!UBERON:0002186;7.30e-14;2!UBERON:0005178;5.93e-11;34!UBERON:0002224;5.93e-11;34!UBERON:0004821;1.10e-09;3!UBERON:0007499;1.10e-09;3!UBERON:0003215;1.10e-09;3!UBERON:0010368;1.10e-09;3!UBERON:0009911;1.10e-09;3!UBERON:0002299;1.10e-09;3!UBERON:0006524;1.10e-09;3!UBERON:0008874;1.10e-09;3!UBERON:0002169;1.10e-09;3!UBERON:0004894;1.10e-09;3!UBERON:0000065;2.77e-09;44!UBERON:0005181;1.71e-08;35!UBERON:0009856;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.16e-26,1;UBERON:0006518,2.16e-26,1;UBERON:0008949,2.16e-26,1;UBERON:0000101,2.16e-26,1;UBERON:0002167,2.16e-26,1;UBERON:0002048,1.45e-18,22;UBERON:0000117,1.45e-18,22;UBERON:0000171,1.45e-18,22;UBERON:0000170,1.45e-18,22;UBERON:0005597,1.45e-18,22;UBERON:0000118,1.45e-18,22;UBERON:0004903,7.30e-14,2;UBERON:0002173,7.30e-14,2;UBERON:0002186,7.30e-14,2;UBERON:0005178,3.45e-12,34;UBERON:0002224,3.45e-12,34;UBERON:0005181,7.47e-12,35;UBERON:0005153,3.09e-11,37;UBERON:0008947,5.95e-11,38;UBERON:0003258,5.95e-11,38;UBERON:0004821,1.10e-09,3;UBERON:0003215,1.10e-09,3;UBERON:0010368,1.10e-09,3;UBERON:0009911,1.10e-09,3;UBERON:0002299,1.10e-09,3;UBERON:0006524,1.10e-09,3;UBERON:0008874,1.10e-09,3;UBERON:0002169,1.10e-09,3;UBERON:0004894,1.10e-09,3;UBERON:0005157,6.22e-09,47;UBERON:0000915,4.14e-08,52;UBERON:0000065,8.01e-08,54;UBERON:0001041,2.23e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,6.25099522974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88326013932776,4.71612915298998,7.87054205159671,0,5.53312569314244,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7482065412268,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.611207220914332,0,0,0,0 | |||
|short_description=p14@RASGRF1 | |||
}} |
Revision as of 08:26, 11 September 2013
Short description: | p14@RASGRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_RASGRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000560943_5end |
EntrezGene: | RASGRF1 |
HGNC: | 9875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.10e-09 | 3 |
epithelial cell of stomach | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.16e-26 | 1 |
right lung lobe | 2.16e-26 | 1 |
lower lobe of lung | 2.16e-26 | 1 |
lobe of lung | 2.16e-26 | 1 |
right lung | 2.16e-26 | 1 |
lung | 1.45e-18 | 22 |
respiratory tube | 1.45e-18 | 22 |
respiration organ | 1.45e-18 | 22 |
pair of lungs | 1.45e-18 | 22 |
lung primordium | 1.45e-18 | 22 |
lung bud | 1.45e-18 | 22 |
bronchoalveolar duct junction | 7.30e-14 | 2 |
alveolar duct | 7.30e-14 | 2 |
bronchiole | 7.30e-14 | 2 |
thoracic cavity element | 3.45e-12 | 34 |
thoracic cavity | 3.45e-12 | 34 |
thoracic segment organ | 7.47e-12 | 35 |
epithelial bud | 3.09e-11 | 37 |
respiratory primordium | 5.95e-11 | 38 |
endoderm of foregut | 5.95e-11 | 38 |
pulmonary alveolus epithelium | 1.10e-09 | 3 |
alveolus | 1.10e-09 | 3 |
pulmonary lobule | 1.10e-09 | 3 |
lobule | 1.10e-09 | 3 |
alveolus of lung | 1.10e-09 | 3 |
alveolar system | 1.10e-09 | 3 |
pulmonary acinus | 1.10e-09 | 3 |
alveolar sac | 1.10e-09 | 3 |
alveolar wall | 1.10e-09 | 3 |
epithelial fold | 6.22e-09 | 47 |
thoracic segment of trunk | 4.14e-08 | 52 |
respiratory tract | 8.01e-08 | 54 |
foregut | 2.23e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.30e-14 | 2 |
signet ring cell adenocarcinoma | 1.21e-13 | 2 |
clear cell adenocarcinoma | 1.55e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.