FFCP PHASE1:Hg19::chr15:77154812..77154833,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=49855|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=13081|TSSclassifier=N|UniProt=|association_with_transcript=41bp_to_AB384603,BC156877_5end|description=CAGE_peak_5_at_SCAPER_5end|id=chr15:77154812..77154833,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;3.81e-07;2!CL:0002535;3.81e-07;2!CL:0000242;3.81e-07;2|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-07,2;CL:0002535,5.28e-07,2|ontology_enrichment_development_v019=UBERON:0005425;5.06e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!3.50e-11!41;UBERON:0001890!3.50e-11!41;UBERON:0006240!3.50e-11!41;UBERON:0007023!3.80e-11!115;UBERON:0001049!5.93e-11!57;UBERON:0005068!5.93e-11!57;UBERON:0006241!5.93e-11!57;UBERON:0007135!5.93e-11!57;UBERON:0003080!1.13e-10!42;UBERON:0002616!4.84e-09!59;UBERON:0000955!7.63e-09!69;UBERON:0006238!7.63e-09!69;UBERON:0001017!1.11e-08!82;UBERON:0002346!1.74e-08!90;UBERON:0002791!1.92e-08!33;UBERON:0001869!3.32e-08!32;UBERON:0000073!3.58e-08!94;UBERON:0001016!3.58e-08!94;UBERON:0002020!3.75e-08!34;UBERON:0003528!3.75e-08!34;UBERON:0005743!4.06e-08!86;UBERON:0001893!5.62e-08!34;UBERON:0003075!5.37e-07!86;UBERON:0007284!5.37e-07!86|ontology_enrichment_uberon_v019=UBERON:0000941;5.06e-13;1!UBERON:0001785;5.06e-13;1!UBERON:0002464;5.06e-13;1!UBERON:0004904;5.06e-13;1!UBERON:0001021;5.06e-13;1!UBERON:0002771;2.43e-07;2!UBERON:0000007;3.81e-07;2!UBERON:0003714;3.81e-07;2!UBERON:0005162;3.81e-07;2!UBERON:0000122;3.81e-07;2!UBERON:0006955;3.81e-07;2!UBERON:0004801;3.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0002771,2.43e-07,2;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2;UBERON:0000007,3.48e-07,2;UBERON:0006955,5.28e-07,2;UBERON:0004801,5.28e-07,2|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.152826811495903,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0.336985893439485,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0,0,0.164437904603676,0.276350017785848,0.869409257205157,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,1.60464117470104,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.330881918197182,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0.502548796003046,0,0,5.9832291840805,0,0.24538298343828,0.500170521059677,0,0,0.356857977594324,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0,0.213425530045242,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0,0,0.2111254081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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=49855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13081 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=41bp_to_AB384603,BC156877_5end | |||
|description=CAGE_peak_5_at_SCAPER_5end | |||
|id=chr15:77154812..77154833,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.81e-07;2!CL:0002535;3.81e-07;2!CL:0000242;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-07,2;CL:0002535,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.06e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.50e-11!41;UBERON:0001890!3.50e-11!41;UBERON:0006240!3.50e-11!41;UBERON:0007023!3.80e-11!115;UBERON:0001049!5.93e-11!57;UBERON:0005068!5.93e-11!57;UBERON:0006241!5.93e-11!57;UBERON:0007135!5.93e-11!57;UBERON:0003080!1.13e-10!42;UBERON:0002616!4.84e-09!59;UBERON:0000955!7.63e-09!69;UBERON:0006238!7.63e-09!69;UBERON:0001017!1.11e-08!82;UBERON:0002346!1.74e-08!90;UBERON:0002791!1.92e-08!33;UBERON:0001869!3.32e-08!32;UBERON:0000073!3.58e-08!94;UBERON:0001016!3.58e-08!94;UBERON:0002020!3.75e-08!34;UBERON:0003528!3.75e-08!34;UBERON:0005743!4.06e-08!86;UBERON:0001893!5.62e-08!34;UBERON:0003075!5.37e-07!86;UBERON:0007284!5.37e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.06e-13;1!UBERON:0001785;5.06e-13;1!UBERON:0002464;5.06e-13;1!UBERON:0004904;5.06e-13;1!UBERON:0001021;5.06e-13;1!UBERON:0002771;2.43e-07;2!UBERON:0000007;3.81e-07;2!UBERON:0003714;3.81e-07;2!UBERON:0005162;3.81e-07;2!UBERON:0000122;3.81e-07;2!UBERON:0006955;3.81e-07;2!UBERON:0004801;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0002771,2.43e-07,2;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2;UBERON:0000007,3.48e-07,2;UBERON:0006955,5.28e-07,2;UBERON:0004801,5.28e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.152826811495903,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0.336985893439485,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0,0,0.164437904603676,0.276350017785848,0.869409257205157,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,1.60464117470104,0.289648807765598,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.330881918197182,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0.502548796003046,0,0,5.9832291840805,0,0.24538298343828,0.500170521059677,0,0,0.356857977594324,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0,0.213425530045242,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0,0,0.211125408127993,0.796991953004279,0.276283915531148,1.0077309914171,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0.694499979733169,0.885741385813839,0.361789315876224,1.52581736317083,0.442317039724898,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0.313265848516366,0.134802265961354,0,0.468528891450678,0.364909578431332,0,0.728341138602278,0.394584402849391,0,0.61214552326098,0,0.450970258243478,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.90392296312213,0,0,0.126621591911757,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.547621515567972,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,0.157566364614447,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0.544813624446302,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0.26446520348538,0,0,0,0,0.828478110694391,0,0.197611631897944,0.243585196761792,0,0,0,0,0.327872630709804,0,0.886068179966986,3.17268288745104,0.3755727921195,0,0.221858103073705,0.0620964029413835,0.415045904808692,0,0.151649117541648,0.285465333544967,0,1.87333962322753,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0.184105950251841,0,0,0,0,0.471797825567689,0.109209638192014,0.169732529954025,1.91317428091515,0.371807292777007,0,0,0.315446980005013,0,0,0.3062454773532,0.128458450192919,0,0.638535436228605,0.4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| |||
|short_description=p5@SCAPER | |||
}} |
Revision as of 08:21, 11 September 2013
Short description: | p5@SCAPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SCAPER_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_AB384603, BC156877_5end |
EntrezGene: | SCAPER |
HGNC: | 13081 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-07 | 2 |
epithelial cell of cervix | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.76e-13 | 1 |
cranial nerve | 3.76e-13 | 1 |
nerve trunk | 3.76e-13 | 1 |
nerve connecting eye with brain | 3.76e-13 | 1 |
nerve | 3.76e-13 | 1 |
retinal neural layer | 3.76e-13 | 1 |
presumptive neural retina | 3.76e-13 | 1 |
middle temporal gyrus | 2.43e-07 | 2 |
neural tissue | 3.28e-07 | 2 |
multi cell component structure | 3.28e-07 | 2 |
neuron projection bundle | 3.28e-07 | 2 |
pituitary gland | 3.48e-07 | 2 |
uterine epithelium | 5.28e-07 | 2 |
cervix epithelium | 5.28e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.