FFCP PHASE1:Hg19::chr15:68594981..68594992,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C836|description=CAGE_peak_at_chr15:68594981..68594992,-|id=chr15:68594981..68594992,-|ontology_enrichment_celltype=CL:0000057!3.47e-18!75;CL:0002620!7.82e-17!23;CL:0000055!2.75e-15!180;CL:0000153!2.86e-08!9;CL:0000447!2.86e-08!9;CL:0002579!5.40e-08!3;CL:0002615!8.57e-08!3;CL:0002320!1.05e-07!365;CL:0002580!1.38e-07!3;CL:0000134!3.39e-07!358;CL:0000048!4.25e-07!430;CL:0000723!8.94e-07!436|ontology_enrichment_celltype_v019=CL:0002579;2.72e-27;3!CL:0002334;2.40e-18;12!CL:0002615;9.09e-13;3!CL:0002580;1.02e-12;3|ontology_enrichment_celltype_v019_2=CL:0002579,2.09e-27,3;CL:0002334,1.90e-18,12;CL:0002615,7.86e-13,3;CL:0002580,8.34e-13,3;CL:0000057,5.00e-12,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!5.18e-10!5;DOID:450!5.18e-10!5;DOID:66!5.18e-10!5;DOID:423!5.18e-10!5;DOID:0080000!5.18e-10!5;DOID:11722!5.18e-10!5|ontology_enrichment_disease_v019=DOID:3369;6.32e-10;1!DOID:4235;6.32e-10;1!DOID:3571;6.32e-10;1|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-10,1;DOID:4235,4.06e-10,1;DOID:3571,1.07e-09,1|ontology_enrichment_uberon=UBERON:0003688!4.09e-14!6;UBERON:0002358!4.09e-14!6;UBERON:0003684!4.09e-14!6;UBERON:0001178!4.09e-14!6;UBERON:0004457!1.11e-13!12;UBERON:0000042!1.11e-13!12;UBERON:0002097!9.65e-11!40;UBERON:0002199!4.65e-09!45;UBERON:0002416!4.65e-09!45;UBERON:0002384!1.11e-08!375|ontology_enrichment_uberon_v019=UBERON:0003688;8.75e-37;6!UBERON:0002358;8.75e-37;6!UBERON:0003684;8.75e-37;6!UBERON:0001178;8.75e-37;6!UBERON:0004457;9.06e-35;9!UBERON:0000042;9.06e-35;9!UBERON:0007195;6.32e-10;1!UBERON:0000310;1.59e-08;10!UBERON:0001443;8.62e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.86e-37,6;UBERON:0002358,5.86e-37,6;UBERON:0003684,5.86e-37,6;UBERON:0001178,5.86e-37,6;UBERON:0004457,4.42e-26,12;UBERON:0000042,4.42e-26,12;UBERON:0007195,9.82e-10,1;UBERON:0000310,1.40e-08,10;UBERON:0001443,7.68e-08,11;UBERON:0004923,1.71e-07,66;UBERON:0002384,5.58e-07,371|phase1_expression=0.54503513781167,2.78330681058278,0.986680828671798,6.00439790118782,1.78784437770915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,2.3858578411533,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.717558542755448,0.85422955527427,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0.930584281657949,0.675105328965065,1.16924406193438,0.757301322732344,1.01254888506529,0.323292113637624,0.710019185033229,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.496215615637554,1.84154367945675,4.2099014164961,1.66580894032411,6.14048698880044,4.98647155545183,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0.0752103283492573,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr15:68594981..68594992,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C836 | |||
|description=CAGE_peak_at_chr15:68594981..68594992,- | |||
|id=chr15:68594981..68594992,- | |||
|ontology_enrichment_celltype=CL:0000057!3.47e-18!75;CL:0002620!7.82e-17!23;CL:0000055!2.75e-15!180;CL:0000153!2.86e-08!9;CL:0000447!2.86e-08!9;CL:0002579!5.40e-08!3;CL:0002615!8.57e-08!3;CL:0002320!1.05e-07!365;CL:0002580!1.38e-07!3;CL:0000134!3.39e-07!358;CL:0000048!4.25e-07!430;CL:0000723!8.94e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.72e-27;3!CL:0002334;2.40e-18;12!CL:0002615;9.09e-13;3!CL:0002580;1.02e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.09e-27,3;CL:0002334,1.90e-18,12;CL:0002615,7.86e-13,3;CL:0002580,8.34e-13,3;CL:0000057,5.00e-12,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.18e-10!5;DOID:450!5.18e-10!5;DOID:66!5.18e-10!5;DOID:423!5.18e-10!5;DOID:0080000!5.18e-10!5;DOID:11722!5.18e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;6.32e-10;1!DOID:4235;6.32e-10;1!DOID:3571;6.32e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-10,1;DOID:4235,4.06e-10,1;DOID:3571,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.09e-14!6;UBERON:0002358!4.09e-14!6;UBERON:0003684!4.09e-14!6;UBERON:0001178!4.09e-14!6;UBERON:0004457!1.11e-13!12;UBERON:0000042!1.11e-13!12;UBERON:0002097!9.65e-11!40;UBERON:0002199!4.65e-09!45;UBERON:0002416!4.65e-09!45;UBERON:0002384!1.11e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.75e-37;6!UBERON:0002358;8.75e-37;6!UBERON:0003684;8.75e-37;6!UBERON:0001178;8.75e-37;6!UBERON:0004457;9.06e-35;9!UBERON:0000042;9.06e-35;9!UBERON:0007195;6.32e-10;1!UBERON:0000310;1.59e-08;10!UBERON:0001443;8.62e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.86e-37,6;UBERON:0002358,5.86e-37,6;UBERON:0003684,5.86e-37,6;UBERON:0001178,5.86e-37,6;UBERON:0004457,4.42e-26,12;UBERON:0000042,4.42e-26,12;UBERON:0007195,9.82e-10,1;UBERON:0000310,1.40e-08,10;UBERON:0001443,7.68e-08,11;UBERON:0004923,1.71e-07,66;UBERON:0002384,5.58e-07,371 | |||
|phase1_expression=0.54503513781167,2.78330681058278,0.986680828671798,6.00439790118782,1.78784437770915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,2.3858578411533,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.717558542755448,0.85422955527427,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0.930584281657949,0.675105328965065,1.16924406193438,0.757301322732344,1.01254888506529,0.323292113637624,0.710019185033229,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.496215615637554,1.84154367945675,4.2099014164961,1.66580894032411,6.14048698880044,4.98647155545183,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0.0752103283492573,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr15:68594981..68594992,- | |||
}} |
Revision as of 08:00, 11 September 2013
Short description: | p@chr15:68594981..68594992, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:68594981..68594992, - |
Coexpression cluster: | C836_Preadipocyte_osteoclastoma_Ewing_Fibroblast_Adipocyte_Osteoblast_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.09e-27 | 3 |
preadipocyte | 1.90e-18 | 12 |
adipocyte of omentum tissue | 7.86e-13 | 3 |
preadipocyte of the breast | 8.34e-13 | 3 |
fibroblast | 5.00e-12 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.86e-37 | 6 |
peritoneum | 5.86e-37 | 6 |
abdominal cavity | 5.86e-37 | 6 |
visceral peritoneum | 5.86e-37 | 6 |
cavity lining | 4.42e-26 | 12 |
serous membrane | 4.42e-26 | 12 |
stroma of bone marrow | 9.82e-10 | 1 |
breast | 1.40e-08 | 10 |
chest | 7.68e-08 | 11 |
organ component layer | 1.71e-07 | 66 |
connective tissue | 5.58e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.40e-10 | 1 |
spindle cell sarcoma | 4.06e-10 | 1 |
liver cancer | 1.07e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.