FFCP PHASE1:Hg19::chr15:59910132..59910144,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9245|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4205|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000559200_5end|coexpression_cluster_id=C184|description=CAGE_peak_9_at_GCNT3_5end|id=chr15:59910132..59910144,+|ontology_enrichment_celltype=CL:0002076!6.80e-08!43|ontology_enrichment_celltype_v019=CL:0000167;3.08e-14;1!CL:0000164;3.08e-14;1!CL:0000502;3.08e-14;1!CL:0000172;3.08e-14;1!CL:0000173;3.08e-14;1|ontology_enrichment_celltype_v019_2=CL:0000167,3.08e-14,1;CL:0000164,3.08e-14,1;CL:0000502,3.08e-14,1;CL:0000172,3.08e-14,1;CL:0000173,3.08e-14,1;CL:0002351,3.08e-14,1|ontology_enrichment_development_v019=CL:0002351;3.08e-14;1!UBERON:0000358;8.57e-14;1!UBERON:0008801;8.57e-14;1!UBERON:0006298;1.51e-13;1!UBERON:0008814;2.05e-07;2!UBERON:0010056;2.05e-07;2!UBERON:0006965;2.05e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;3.08e-14;1|ontology_enrichment_disease_v019_2=DOID:4430,3.08e-14,1|ontology_enrichment_uberon=UBERON:0003408!5.62e-15!10;UBERON:0006562!2.01e-13!11;UBERON:0000166!2.68e-12!21;UBERON:0001044!3.34e-12!6;UBERON:0003293!3.34e-12!6;UBERON:0003294!3.34e-12!6;UBERON:0010047!3.34e-12!6;UBERON:0000167!3.34e-12!6;UBERON:0004921!3.42e-12!129;UBERON:0004185!3.42e-12!129;UBERON:0004119!4.03e-12!169;UBERON:0000925!4.03e-12!169;UBERON:0006595!4.03e-12!169;UBERON:0001004!8.45e-12!72;UBERON:0001007!2.17e-11!155;UBERON:0001555!2.17e-11!155;UBERON:0007026!2.17e-11!155;UBERON:0000078!2.22e-11!18;UBERON:0000161!8.71e-11!35;UBERON:0001042!1.36e-10!10;UBERON:0009145!1.36e-10!10;UBERON:0003127!2.02e-10!2;UBERON:0001829!3.03e-10!2;UBERON:0000077!8.77e-10!130;UBERON:0000165!6.79e-09!28;UBERON:0000930!6.79e-09!28;UBERON:0001041!9.05e-08!98;UBERON:0000065!9.36e-08!53;UBERON:0001723!4.88e-07!3;UBERON:0001033!4.88e-07!3;UBERON:0010056!4.88e-07!3;UBERON:0000974!8.50e-07!10|ontology_enrichment_uberon_v019=UBERON:0003127;3.16e-26;2!UBERON:0001829;1.53e-25;2!UBERON:0001044;3.98e-19;6!UBERON:0003293;3.98e-19;6!UBERON:0003294;3.98e-19;6!UBERON:0010047;3.98e-19;6!UBERON:0003408;3.98e-19;6!UBERON:0000167;3.98e-19;6!UBERON:0001723;1.71e-17;3!UBERON:0001033;1.71e-17;3!UBERON:0000165;1.53e-15;28!UBERON:0001831;8.57e-14;1!UBERON:0001567;8.57e-14;1!UBERON:0002372;1.51e-13;1!UBERON:0001736;1.51e-13;1!UBERON:0000996;1.51e-13;1!UBERON:0001961;1.51e-13;1!UBERON:0001744;1.51e-13;1!UBERON:0001042;1.51e-13;1!UBERON:0001735;1.51e-13;1!UBERON:0000161;1.21e-10;19!UBERON:0000166;1.21e-10;19!UBERON:0001041;1.55e-08;14!UBERON:0003126;3.57e-08;7!UBERON:0001005;3.57e-08;7!UBERON:0000341;1.05e-07;2!UBERON:0004089;1.54e-07;2!UBERON:0006562;2.05e-07;2!UBERON:0000153;3.47e-07;54!UBERON:0007811;6.45e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.16e-26,2;UBERON:0001829,9.87e-26,2;UBERON:0000166,7.69e-20,22;UBERON:0001044,3.20e-19,6;UBERON:0003293,3.20e-19,6;UBERON:0003294,3.20e-19,6;UBERON:0010047,3.20e-19,6;UBERON:0000167,3.20e-19,6;UBERON:0001723,2.30e-17,3;UBERON:0001033,2.30e-17,3;UBERON:0010056,2.30e-17,3;UBERON:0000161,3.51e-16,36;UBERON:0000165,5.44e-15,29;UBERON:0000930,5.44e-15,29;UBERON:0001831,7.55e-14,1;UBERON:0001567,7.55e-14,1;UBERON:0008801,7.55e-14,1;UBERON:0001736,1.10e-13,1;UBERON:0006298,1.10e-13,1;UBERON:0000996,1.42e-13,1;UBERON:0002372,1.61e-13,1;UBERON:0001961,1.61e-13,1;UBERON:0001744,1.61e-13,1;UBERON:0001735,1.61e-13,1;UBERON:0003408,8.74e-12,10;UBERON:0001042,1.22e-11,10;UBERON:0009145,1.22e-11,10;UBERON:0006562,1.23e-10,11;UBERON:0001004,6.37e-10,74;UBERON:0000153,3.23e-09,62;UBERON:0007811,3.23e-09,62;UBERON:0001444,9.64e-09,49;UBERON:0001041,2.59e-08,87;UBERON:0003126,3.57e-08,7;UBERON:0001005,3.57e-08,7;UBERON:0007023,9.15e-08,114;UBERON:0000341,1.05e-07,2;UBERON:0000033,1.32e-07,56;UBERON:0004089,1.45e-07,2;UBERON:0004921,2.12e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736647911487171,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0.27628391553114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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000559200_5end | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_9_at_GCNT3_5end | |||
|id=chr15:59910132..59910144,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.80e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.08e-14;1!CL:0000164;3.08e-14;1!CL:0000502;3.08e-14;1!CL:0000172;3.08e-14;1!CL:0000173;3.08e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.08e-14,1;CL:0000164,3.08e-14,1;CL:0000502,3.08e-14,1;CL:0000172,3.08e-14,1;CL:0000173,3.08e-14,1;CL:0002351,3.08e-14,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.08e-14;1!UBERON:0000358;8.57e-14;1!UBERON:0008801;8.57e-14;1!UBERON:0006298;1.51e-13;1!UBERON:0008814;2.05e-07;2!UBERON:0010056;2.05e-07;2!UBERON:0006965;2.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;3.08e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.08e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0003408!5.62e-15!10;UBERON:0006562!2.01e-13!11;UBERON:0000166!2.68e-12!21;UBERON:0001044!3.34e-12!6;UBERON:0003293!3.34e-12!6;UBERON:0003294!3.34e-12!6;UBERON:0010047!3.34e-12!6;UBERON:0000167!3.34e-12!6;UBERON:0004921!3.42e-12!129;UBERON:0004185!3.42e-12!129;UBERON:0004119!4.03e-12!169;UBERON:0000925!4.03e-12!169;UBERON:0006595!4.03e-12!169;UBERON:0001004!8.45e-12!72;UBERON:0001007!2.17e-11!155;UBERON:0001555!2.17e-11!155;UBERON:0007026!2.17e-11!155;UBERON:0000078!2.22e-11!18;UBERON:0000161!8.71e-11!35;UBERON:0001042!1.36e-10!10;UBERON:0009145!1.36e-10!10;UBERON:0003127!2.02e-10!2;UBERON:0001829!3.03e-10!2;UBERON:0000077!8.77e-10!130;UBERON:0000165!6.79e-09!28;UBERON:0000930!6.79e-09!28;UBERON:0001041!9.05e-08!98;UBERON:0000065!9.36e-08!53;UBERON:0001723!4.88e-07!3;UBERON:0001033!4.88e-07!3;UBERON:0010056!4.88e-07!3;UBERON:0000974!8.50e-07!10 | |||
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|short_description=p9@GCNT3 | |||
}} |
Revision as of 07:40, 11 September 2013
Short description: | p9@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 0bp_to_ENST00000559200_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.08e-14 | 1 |
enteroendocrine cell | 3.08e-14 | 1 |
type D enteroendocrine cell | 3.08e-14 | 1 |
somatostatin secreting cell | 3.08e-14 | 1 |
pancreatic D cell | 3.08e-14 | 1 |
progenitor cell of endocrine pancreas | 3.08e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.08e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.