FFCP PHASE1:Hg19::chr15:58623617..58623628,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8854|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15472|TSSclassifier=S|UniProt=|association_with_transcript=34bp_to_ENST00000561098_5end|coexpression_cluster_id=C43|description=CAGE_peak_8_at_ALDH1A2_5end|id=chr15:58623617..58623628,-|ontology_enrichment_celltype=CL:0000860!1.89e-08!45;CL:1000487!7.22e-07!2|ontology_enrichment_celltype_v019=CL:1001319;2.08e-16;1!CL:1000600;2.08e-16;1!CL:0000182;3.03e-12;12|ontology_enrichment_celltype_v019_2=CL:1001319,3.07e-16,1;CL:1000600,3.07e-16,1;CL:0000182,2.97e-12,12|ontology_enrichment_development_v019=UBERON:0005754;4.72e-17;1!UBERON:0007297;3.43e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000162!1.55e-13!14;UBERON:0001353!1.55e-13!14;UBERON:0000163!1.55e-13!14;UBERON:0006866!1.55e-13!14;UBERON:0000164!1.55e-13!14;UBERON:0000931!1.55e-13!14;UBERON:0003101!7.02e-13!22;UBERON:0000079!7.02e-13!22;UBERON:0004122!1.55e-12!15;UBERON:0003937!1.71e-12!12;UBERON:0005399!1.71e-12!12;UBERON:0003929!4.69e-10!54;UBERON:0002367!4.98e-10!11;UBERON:0010147!4.98e-10!11;UBERON:0009846!4.98e-10!11;UBERON:0003353!4.98e-10!11;UBERON:0004902!4.98e-10!11;UBERON:0003820!4.98e-10!11;UBERON:0009847!4.98e-10!11;UBERON:0001046!1.36e-09!19;UBERON:0002530!7.04e-09!59;UBERON:0000007!1.56e-07!2;UBERON:0000062!1.61e-07!511;UBERON:0001255!1.72e-07!2;UBERON:0001556!1.72e-07!2;UBERON:0009497!3.25e-07!25;UBERON:0000015!3.25e-07!25;UBERON:0002423!3.25e-07!25;UBERON:0006235!3.25e-07!25;UBERON:0004161!3.25e-07!25;UBERON:0003064!7.68e-07!37|ontology_enrichment_uberon_v019=UBERON:0006947;7.68e-22;3!UBERON:0004054;7.68e-22;3!UBERON:0003937;1.08e-20;12!UBERON:0005399;1.08e-20;12!UBERON:0003101;1.74e-17;22!UBERON:0000079;1.74e-17;22!UBERON:0000998;4.72e-17;1!UBERON:0006868;4.72e-17;1!UBERON:0001000;5.53e-17;1!UBERON:0005352;5.53e-17;1!UBERON:0005904;1.21e-16;4!UBERON:0004645;2.08e-16;1!UBERON:0001256;2.08e-16;1!UBERON:0001259;2.08e-16;1!UBERON:0002423;2.17e-15;25!UBERON:0000058;1.51e-14;10!UBERON:0002107;2.57e-13;19!UBERON:0006925;2.57e-13;19!UBERON:0002367;4.75e-13;11!UBERON:0010147;4.75e-13;11!UBERON:0002530;1.64e-11;57!UBERON:0000077;2.75e-09;27!UBERON:0001255;7.21e-09;2!UBERON:0001556;7.21e-09;2!UBERON:0002365;1.56e-08;31!UBERON:0002330;1.56e-08;31!UBERON:0003350;1.71e-08;8!UBERON:0002368;5.75e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0003929,4.45e-22,54;UBERON:0006947,7.68e-22,3;UBERON:0004054,7.68e-22,3;UBERON:0003937,1.16e-20,12;UBERON:0005399,1.16e-20,12;UBERON:0005911,1.20e-17,82;UBERON:0000162,1.53e-17,14;UBERON:0001353,1.53e-17,14;UBERON:0000163,1.53e-17,14;UBERON:0006866,1.53e-17,14;UBERON:0000164,1.53e-17,14;UBERON:0000931,1.53e-17,14;UBERON:0008835,1.60e-17,22;UBERON:0003894,1.60e-17,22;UBERON:0003101,1.84e-17,22;UBERON:0000079,1.84e-17,22;UBERON:0000998,4.72e-17,1;UBERON:0006868,4.72e-17,1;UBERON:0001000,5.53e-17,1;UBERON:0005352,5.53e-17,1;UBERON:0009854,9.15e-17,23;UBERON:0005904,1.21e-16,4;UBERON:0004122,2.13e-16,15;UBERON:0004645,3.07e-16,1;UBERON:0001256,3.07e-16,1;UBERON:0001259,3.07e-16,1;UBERON:0002530,5.07e-16,59;UBERON:0007499,1.98e-15,25;UBERON:0009497,1.98e-15,25;UBERON:0000015,1.98e-15,25;UBERON:0002423,1.98e-15,25;UBERON:0006235,1.98e-15,25;UBERON:0004161,1.98e-15,25;UBERON:0009856,7.71e-15,26;UBERON:0003064,1.31e-13,28;UBERON:0002107,2.53e-13,19;UBERON:0006925,2.53e-13,19;UBERON:0008836,2.53e-13,19;UBERON:0002367,5.06e-13,11;UBERON:0010147,5.06e-13,11;UBERON:0009846,5.06e-13,11;UBERON:0003353,5.06e-13,11;UBERON:0004902,5.06e-13,11;UBERON:0003820,5.06e-13,11;UBERON:0009847,5.06e-13,11;UBERON:0001046,5.09e-13,19;UBERON:0004921,7.09e-12,118;UBERON:0005256,1.29e-11,122;UBERON:0001007,1.69e-09,145;UBERON:0001555,1.69e-09,145;UBERON:0007026,1.69e-09,145;UBERON:0001255,8.74e-09,2;UBERON:0001556,8.74e-09,2;UBERON:0000077,1.25e-08,29;UBERON:0003104,1.28e-08,160;UBERON:0009142,1.28e-08,160;UBERON:0004119,1.62e-08,160;UBERON:0000925,1.62e-08,160;UBERON:0006595,1.62e-08,160;UBERON:0003350,1.92e-08,8;UBERON:0002365,2.86e-08,31;UBERON:0002330,2.86e-08,31;UBERON:0006554,4.15e-08,47;UBERON:0000058,5.88e-08,19;UBERON:0001008,6.13e-08,48;UBERON:0000490,1.54e-07,148;UBERON:0002368,2.38e-07,35;UBERON:0005172,3.52e-07,54;UBERON:0005173,3.52e-07,54;UBERON:0000161,5.37e-07,36|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000561098_5end | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_8_at_ALDH1A2_5end | |||
|id=chr15:58623617..58623628,- | |||
|ontology_enrichment_celltype=CL:0000860!1.89e-08!45;CL:1000487!7.22e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.08e-16;1!CL:1000600;2.08e-16;1!CL:0000182;3.03e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,3.07e-16,1;CL:1000600,3.07e-16,1;CL:0000182,2.97e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.72e-17;1!UBERON:0007297;3.43e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000162!1.55e-13!14;UBERON:0001353!1.55e-13!14;UBERON:0000163!1.55e-13!14;UBERON:0006866!1.55e-13!14;UBERON:0000164!1.55e-13!14;UBERON:0000931!1.55e-13!14;UBERON:0003101!7.02e-13!22;UBERON:0000079!7.02e-13!22;UBERON:0004122!1.55e-12!15;UBERON:0003937!1.71e-12!12;UBERON:0005399!1.71e-12!12;UBERON:0003929!4.69e-10!54;UBERON:0002367!4.98e-10!11;UBERON:0010147!4.98e-10!11;UBERON:0009846!4.98e-10!11;UBERON:0003353!4.98e-10!11;UBERON:0004902!4.98e-10!11;UBERON:0003820!4.98e-10!11;UBERON:0009847!4.98e-10!11;UBERON:0001046!1.36e-09!19;UBERON:0002530!7.04e-09!59;UBERON:0000007!1.56e-07!2;UBERON:0000062!1.61e-07!511;UBERON:0001255!1.72e-07!2;UBERON:0001556!1.72e-07!2;UBERON:0009497!3.25e-07!25;UBERON:0000015!3.25e-07!25;UBERON:0002423!3.25e-07!25;UBERON:0006235!3.25e-07!25;UBERON:0004161!3.25e-07!25;UBERON:0003064!7.68e-07!37 | |||
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|short_description=p8@ALDH1A2 | |||
}} |
Revision as of 07:37, 11 September 2013
Short description: | p8@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ALDH1A2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 34bp_to_ENST00000561098_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.07e-16 | 1 |
lower urinary tract cell | 3.07e-16 | 1 |
hepatocyte | 2.97e-12 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.