FFCP PHASE1:Hg19::chr15:45937763..45937771,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C21|description=CAGE_peak_at_chr15:45937763..45937771,+|id=chr15:45937763..45937771,+|ontology_enrichment_celltype=CL:0002057!1.03e-38!42;CL:0000766!1.11e-38!76;CL:0002009!2.93e-37!65;CL:0002194!2.01e-36!63;CL:0000576!2.01e-36!63;CL:0000040!2.01e-36!63;CL:0000559!2.01e-36!63;CL:0000860!1.63e-35!45;CL:0000557!3.42e-33!71;CL:0000839!1.00e-31!70;CL:0000763!3.14e-25!112;CL:0000049!3.14e-25!112;CL:0000738!1.38e-21!140;CL:0002087!2.55e-19!119;CL:0002031!2.68e-19!124;CL:0000988!1.27e-18!182;CL:0002032!2.35e-17!165;CL:0000837!2.35e-17!165;CL:0000037!4.49e-17!172;CL:0000566!4.49e-17!172;CL:0000134!7.07e-10!358;CL:0002320!2.20e-09!365;CL:0000048!4.90e-09!430;CL:0000723!1.13e-08!436;CL:0000034!3.30e-08!444;CL:0000219!1.14e-07!390;CL:0000767!1.96e-07!3;CL:0000081!4.75e-07!11;CL:0000094!5.94e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.43e-42;33!CL:0002057;1.43e-42;33!CL:0000473;2.31e-42;39!CL:0000234;2.31e-42;39!CL:0000576;1.35e-22;48!CL:0000766;3.36e-15;69!CL:0002087;1.26e-10;104!CL:0000763;1.11e-09;100!CL:0000988;1.44e-07;177!CL:0000738;5.44e-07;136|ontology_enrichment_celltype_v019_2=CL:0000473,1.46e-46,48;CL:0000234,1.46e-46,48;CL:0000860,6.63e-43,42;CL:0002057,6.63e-43,42;CL:0002194,1.65e-36,59;CL:0000576,1.65e-36,59;CL:0000040,1.65e-36,59;CL:0000559,1.65e-36,59;CL:0000766,3.43e-36,72;CL:0002009,3.27e-35,61;CL:0000839,2.63e-32,66;CL:0000557,8.91e-32,67;CL:0002087,3.37e-26,115;CL:0000738,6.71e-26,136;CL:0002031,6.18e-25,120;CL:0000988,7.44e-25,177;CL:0000763,6.78e-23,108;CL:0000049,6.78e-23,108;CL:0002032,3.43e-21,161;CL:0000837,3.43e-21,161;CL:0000037,4.03e-20,168;CL:0000134,6.10e-08,354;CL:0002320,1.08e-07,361;CL:0000219,8.19e-07,386|ontology_enrichment_development_v019=CL:0002057;2.81e-33;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;2.44e-08;1!DOID:0060061;2.44e-08;1!DOID:8691;2.44e-08;1|ontology_enrichment_disease_v019_2=DOID:0060060,2.52e-08,1;DOID:0060061,2.52e-08,1;DOID:8691,2.52e-08,1|ontology_enrichment_uberon=UBERON:0002371!5.96e-32!80;UBERON:0001474!6.33e-29!86;UBERON:0002390!1.33e-27!102;UBERON:0003061!1.33e-27!102;UBERON:0004765!9.40e-26!101;UBERON:0001434!9.40e-26!101;UBERON:0002193!4.76e-24!112;UBERON:0002405!5.66e-20!115;UBERON:0002204!2.22e-17!167;UBERON:0003081!5.92e-14!216;UBERON:0002384!1.03e-08!375|ontology_enrichment_uberon_v019=UBERON:0002331;6.36e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.01e-29,98;UBERON:0003061,9.01e-29,98;UBERON:0002371,1.26e-27,76;UBERON:0002193,9.63e-26,108;UBERON:0001474,2.34e-25,82;UBERON:0004765,8.49e-23,90;UBERON:0002405,5.98e-22,93;UBERON:0001434,3.62e-20,100;UBERON:0003081,1.84e-14,203;UBERON:0002204,5.90e-12,167;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315;UBERON:0002384,2.37e-07,371;UBERON:0002331,6.36e-07,10;UBERON:0000358,6.36e-07,10;UBERON:0000307,6.36e-07,10;UBERON:0000091,6.36e-07,10;UBERON:0000087,6.36e-07,10;UBERON:0007010,6.36e-07,10;UBERON:0007806,6.36e-07,10;UBERON:0008780,6.36e-07,10;UBERON:0005728,6.36e-07,10|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.619264493264304,0,0,0,0,0,0.293600439334847,3.32397245119126,0.802177789880567,0,0.223915474239924,0,0,0.872389432677388,0,0.485168122375632,3.25400651667958,0,2.16794459626573,14.0969272237854,0.256160706529101,8.98632473576624,13.1003358679915,0.645484683583826,5.41705946377367,1.88242339542605,0,3.82029923556644,11.9372718024652,0.641858054152187,7.67204550958849,2.96866170168044,0,0.426224750532694,6.38460324982885,0,0.622822248995575,7.28621129244555,0.521482918420201,6.95004303056373,3.63239701580021,0.368277635987565,5.69632297393592,0,0,0.209658645508376,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,1.19168262731897,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.2023155617111,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr15:45937763..45937771,+ | |||
|id=chr15:45937763..45937771,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.03e-38!42;CL:0000766!1.11e-38!76;CL:0002009!2.93e-37!65;CL:0002194!2.01e-36!63;CL:0000576!2.01e-36!63;CL:0000040!2.01e-36!63;CL:0000559!2.01e-36!63;CL:0000860!1.63e-35!45;CL:0000557!3.42e-33!71;CL:0000839!1.00e-31!70;CL:0000763!3.14e-25!112;CL:0000049!3.14e-25!112;CL:0000738!1.38e-21!140;CL:0002087!2.55e-19!119;CL:0002031!2.68e-19!124;CL:0000988!1.27e-18!182;CL:0002032!2.35e-17!165;CL:0000837!2.35e-17!165;CL:0000037!4.49e-17!172;CL:0000566!4.49e-17!172;CL:0000134!7.07e-10!358;CL:0002320!2.20e-09!365;CL:0000048!4.90e-09!430;CL:0000723!1.13e-08!436;CL:0000034!3.30e-08!444;CL:0000219!1.14e-07!390;CL:0000767!1.96e-07!3;CL:0000081!4.75e-07!11;CL:0000094!5.94e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-42;33!CL:0002057;1.43e-42;33!CL:0000473;2.31e-42;39!CL:0000234;2.31e-42;39!CL:0000576;1.35e-22;48!CL:0000766;3.36e-15;69!CL:0002087;1.26e-10;104!CL:0000763;1.11e-09;100!CL:0000988;1.44e-07;177!CL:0000738;5.44e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.46e-46,48;CL:0000234,1.46e-46,48;CL:0000860,6.63e-43,42;CL:0002057,6.63e-43,42;CL:0002194,1.65e-36,59;CL:0000576,1.65e-36,59;CL:0000040,1.65e-36,59;CL:0000559,1.65e-36,59;CL:0000766,3.43e-36,72;CL:0002009,3.27e-35,61;CL:0000839,2.63e-32,66;CL:0000557,8.91e-32,67;CL:0002087,3.37e-26,115;CL:0000738,6.71e-26,136;CL:0002031,6.18e-25,120;CL:0000988,7.44e-25,177;CL:0000763,6.78e-23,108;CL:0000049,6.78e-23,108;CL:0002032,3.43e-21,161;CL:0000837,3.43e-21,161;CL:0000037,4.03e-20,168;CL:0000134,6.10e-08,354;CL:0002320,1.08e-07,361;CL:0000219,8.19e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.81e-33;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.44e-08;1!DOID:0060061;2.44e-08;1!DOID:8691;2.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.52e-08,1;DOID:0060061,2.52e-08,1;DOID:8691,2.52e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.96e-32!80;UBERON:0001474!6.33e-29!86;UBERON:0002390!1.33e-27!102;UBERON:0003061!1.33e-27!102;UBERON:0004765!9.40e-26!101;UBERON:0001434!9.40e-26!101;UBERON:0002193!4.76e-24!112;UBERON:0002405!5.66e-20!115;UBERON:0002204!2.22e-17!167;UBERON:0003081!5.92e-14!216;UBERON:0002384!1.03e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.36e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.01e-29,98;UBERON:0003061,9.01e-29,98;UBERON:0002371,1.26e-27,76;UBERON:0002193,9.63e-26,108;UBERON:0001474,2.34e-25,82;UBERON:0004765,8.49e-23,90;UBERON:0002405,5.98e-22,93;UBERON:0001434,3.62e-20,100;UBERON:0003081,1.84e-14,203;UBERON:0002204,5.90e-12,167;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315;UBERON:0002384,2.37e-07,371;UBERON:0002331,6.36e-07,10;UBERON:0000358,6.36e-07,10;UBERON:0000307,6.36e-07,10;UBERON:0000091,6.36e-07,10;UBERON:0000087,6.36e-07,10;UBERON:0007010,6.36e-07,10;UBERON:0007806,6.36e-07,10;UBERON:0008780,6.36e-07,10;UBERON:0005728,6.36e-07,10 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.619264493264304,0,0,0,0,0,0.293600439334847,3.32397245119126,0.802177789880567,0,0.223915474239924,0,0,0.872389432677388,0,0.485168122375632,3.25400651667958,0,2.16794459626573,14.0969272237854,0.256160706529101,8.98632473576624,13.1003358679915,0.645484683583826,5.41705946377367,1.88242339542605,0,3.82029923556644,11.9372718024652,0.641858054152187,7.67204550958849,2.96866170168044,0,0.426224750532694,6.38460324982885,0,0.622822248995575,7.28621129244555,0.521482918420201,6.95004303056373,3.63239701580021,0.368277635987565,5.69632297393592,0,0,0.209658645508376,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,1.19168262731897,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.2023155617111,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,7.91248028370096,0,0,0,0,0,0,0,2.80166586185491,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,45.6642538168158,22.2415090103705,22.8684069416947,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62887354279315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0.889811221596536,0.457680136793847,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7992563554409,0.213383459388282,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:45937763..45937771,+ | |||
}} |
Revision as of 07:13, 11 September 2013
Short description: | p@chr15:45937763..45937771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:45937763..45937771, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.46e-46 | 48 |
phagocyte | 1.46e-46 | 48 |
classical monocyte | 6.63e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.63e-43 | 42 |
monopoietic cell | 1.65e-36 | 59 |
monocyte | 1.65e-36 | 59 |
monoblast | 1.65e-36 | 59 |
promonocyte | 1.65e-36 | 59 |
myeloid leukocyte | 3.43e-36 | 72 |
macrophage dendritic cell progenitor | 3.27e-35 | 61 |
myeloid lineage restricted progenitor cell | 2.63e-32 | 66 |
granulocyte monocyte progenitor cell | 8.91e-32 | 67 |
nongranular leukocyte | 3.37e-26 | 115 |
leukocyte | 6.71e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 6.18e-25 | 120 |
hematopoietic cell | 7.44e-25 | 177 |
myeloid cell | 6.78e-23 | 108 |
common myeloid progenitor | 6.78e-23 | 108 |
hematopoietic oligopotent progenitor cell | 3.43e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-21 | 161 |
hematopoietic stem cell | 4.03e-20 | 168 |
mesenchymal cell | 6.10e-08 | 354 |
connective tissue cell | 1.08e-07 | 361 |
motile cell | 8.19e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.01e-29 | 98 |
blood island | 9.01e-29 | 98 |
bone marrow | 1.26e-27 | 76 |
hemolymphoid system | 9.63e-26 | 108 |
bone element | 2.34e-25 | 82 |
skeletal element | 8.49e-23 | 90 |
immune system | 5.98e-22 | 93 |
skeletal system | 3.62e-20 | 100 |
lateral plate mesoderm | 1.84e-14 | 203 |
musculoskeletal system | 5.90e-12 | 167 |
mesoderm | 1.07e-07 | 315 |
mesoderm-derived structure | 1.07e-07 | 315 |
presumptive mesoderm | 1.07e-07 | 315 |
connective tissue | 2.37e-07 | 371 |
umbilical cord | 6.36e-07 | 10 |
blastocyst | 6.36e-07 | 10 |
blastula | 6.36e-07 | 10 |
bilaminar disc | 6.36e-07 | 10 |
inner cell mass | 6.36e-07 | 10 |
cleaving embryo | 6.36e-07 | 10 |
connecting stalk | 6.36e-07 | 10 |
inner cell mass derived epiblast | 6.36e-07 | 10 |
extraembryonic mesoderm | 6.36e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.52e-08 | 1 |
cutaneous T cell lymphoma | 2.52e-08 | 1 |
mycosis fungoides | 2.52e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.