FFCP PHASE1:Hg19::chr15:44487518..44487525,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84978|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28214|TSSclassifier=S|UniProt=F8WCI0|association_with_transcript=-68bp_to_ENST00000451277_5end|description=CAGE_peak_4_at_FRMD5_5end|id=chr15:44487518..44487525,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000632;1.12e-08;3!CL:0000306;8.14e-07;4!CL:0002222;8.14e-07;4!CL:0002224;8.14e-07;4|ontology_enrichment_celltype_v019_2=CL:0000632,9.66e-09,3;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!1.54e-16!86;UBERON:0007284!1.54e-16!86;UBERON:0001049!8.06e-16!57;UBERON:0005068!8.06e-16!57;UBERON:0006241!8.06e-16!57;UBERON:0007135!8.06e-16!57;UBERON:0002346!4.06e-15!90;UBERON:0000073!1.63e-14!94;UBERON:0001016!1.63e-14!94;UBERON:0000955!2.75e-14!69;UBERON:0006238!2.75e-14!69;UBERON:0005743!5.89e-14!86;UBERON:0001017!1.40e-13!82;UBERON:0003056!4.04e-13!61;UBERON:0001893!4.71e-13!34;UBERON:0002020!6.79e-13!34;UBERON:0003528!6.79e-13!34;UBERON:0001869!8.58e-13!32;UBERON:0000033!9.95e-13!123;UBERON:0002616!1.03e-12!59;UBERON:0002791!2.59e-12!33;UBERON:0000119!7.23e-12!312;UBERON:0000483!7.29e-12!309;UBERON:0002780!8.99e-12!41;UBERON:0001890!8.99e-12!41;UBERON:0006240!8.99e-12!41;UBERON:0004121!1.21e-11!169;UBERON:0000153!2.24e-11!129;UBERON:0007811!2.24e-11!129;UBERON:0003080!2.67e-11!42;UBERON:0000924!6.16e-11!173;UBERON:0006601!6.16e-11!173;UBERON:0000025!7.25e-11!194;UBERON:0000956!2.21e-10!25;UBERON:0000203!2.21e-10!25;UBERON:0002619!6.85e-10!22;UBERON:0000477!1.70e-09!286;UBERON:0004111!1.81e-09!241;UBERON:0000475!7.41e-09!365;UBERON:0000922!1.37e-08!612;UBERON:0000467!2.08e-08!625;UBERON:0000480!2.53e-08!626;UBERON:0000468!3.00e-08!659;UBERON:0001950!3.85e-08!20;UBERON:0000481!2.63e-07!347;UBERON:0000923!4.39e-07!604;UBERON:0005291!4.39e-07!604;UBERON:0006598!4.39e-07!604;UBERON:0002532!4.39e-07!604;UBERON:0002050!5.25e-07!605;UBERON:0005423!5.25e-07!605|ontology_enrichment_uberon_v019=UBERON:0001954;2.31e-12;2!UBERON:0003022;2.31e-12;2!UBERON:0002421;2.31e-12;2!UBERON:0002600;2.31e-12;2!UBERON:0010077;8.14e-07;4!UBERON:0005389;8.14e-07;4!UBERON:0000484;8.14e-07;4!UBERON:0000965;8.14e-07;4!UBERON:0001803;8.14e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.65e-12,2;UBERON:0003022,1.65e-12,2;UBERON:0002421,1.65e-12,2;UBERON:0002600,1.65e-12,2;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.710019185033229,0,0,0,0,0,0.487894824518382,0.265059536642971,0.348581828608555,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0.451199612907412,0.462092022626489,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84978 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28214 | |||
|TSSclassifier=S | |||
|UniProt=F8WCI0 | |||
|association_with_transcript=-68bp_to_ENST00000451277_5end | |||
|description=CAGE_peak_4_at_FRMD5_5end | |||
|id=chr15:44487518..44487525,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.12e-08;3!CL:0000306;8.14e-07;4!CL:0002222;8.14e-07;4!CL:0002224;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,9.66e-09,3;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.54e-16!86;UBERON:0007284!1.54e-16!86;UBERON:0001049!8.06e-16!57;UBERON:0005068!8.06e-16!57;UBERON:0006241!8.06e-16!57;UBERON:0007135!8.06e-16!57;UBERON:0002346!4.06e-15!90;UBERON:0000073!1.63e-14!94;UBERON:0001016!1.63e-14!94;UBERON:0000955!2.75e-14!69;UBERON:0006238!2.75e-14!69;UBERON:0005743!5.89e-14!86;UBERON:0001017!1.40e-13!82;UBERON:0003056!4.04e-13!61;UBERON:0001893!4.71e-13!34;UBERON:0002020!6.79e-13!34;UBERON:0003528!6.79e-13!34;UBERON:0001869!8.58e-13!32;UBERON:0000033!9.95e-13!123;UBERON:0002616!1.03e-12!59;UBERON:0002791!2.59e-12!33;UBERON:0000119!7.23e-12!312;UBERON:0000483!7.29e-12!309;UBERON:0002780!8.99e-12!41;UBERON:0001890!8.99e-12!41;UBERON:0006240!8.99e-12!41;UBERON:0004121!1.21e-11!169;UBERON:0000153!2.24e-11!129;UBERON:0007811!2.24e-11!129;UBERON:0003080!2.67e-11!42;UBERON:0000924!6.16e-11!173;UBERON:0006601!6.16e-11!173;UBERON:0000025!7.25e-11!194;UBERON:0000956!2.21e-10!25;UBERON:0000203!2.21e-10!25;UBERON:0002619!6.85e-10!22;UBERON:0000477!1.70e-09!286;UBERON:0004111!1.81e-09!241;UBERON:0000475!7.41e-09!365;UBERON:0000922!1.37e-08!612;UBERON:0000467!2.08e-08!625;UBERON:0000480!2.53e-08!626;UBERON:0000468!3.00e-08!659;UBERON:0001950!3.85e-08!20;UBERON:0000481!2.63e-07!347;UBERON:0000923!4.39e-07!604;UBERON:0005291!4.39e-07!604;UBERON:0006598!4.39e-07!604;UBERON:0002532!4.39e-07!604;UBERON:0002050!5.25e-07!605;UBERON:0005423!5.25e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;2.31e-12;2!UBERON:0003022;2.31e-12;2!UBERON:0002421;2.31e-12;2!UBERON:0002600;2.31e-12;2!UBERON:0010077;8.14e-07;4!UBERON:0005389;8.14e-07;4!UBERON:0000484;8.14e-07;4!UBERON:0000965;8.14e-07;4!UBERON:0001803;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.65e-12,2;UBERON:0003022,1.65e-12,2;UBERON:0002421,1.65e-12,2;UBERON:0002600,1.65e-12,2;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4 | |||
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| |||
|short_description=p4@FRMD5 | |||
}} |
Revision as of 07:07, 11 September 2013
Short description: | p4@FRMD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FRMD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -68bp_to_ENST00000451277_5end |
EntrezGene: | FRMD5 |
HGNC: | 28214 |
UniProt: | F8WCI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 9.66e-09 | 3 |
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.65e-12 | 2 |
lobe parts of cerebral cortex | 1.65e-12 | 2 |
hippocampal formation | 1.65e-12 | 2 |
limbic lobe | 1.65e-12 | 2 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.