FFCP PHASE1:Hg19::chr15:42566589..42566606,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2595|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4139|TSSclassifier=W|UniProt=Q8TET4,E7EWB6|association_with_transcript=149bp_to_ENST00000318010,ENST00000440615_5end|coexpression_cluster_id=C2333|description=CAGE_peak_10_at_GANC_5end|id=chr15:42566589..42566606,+|ontology_enrichment_celltype=CL:0000057!1.27e-10!75;CL:0002620!1.53e-09!23;CL:0000055!5.03e-07!180|ontology_enrichment_celltype_v019=CL:0002621;1.40e-13;3!CL:0002159;3.79e-11;14!CL:0002591;8.20e-11;1!CL:0000362;3.63e-10;9!CL:0000312;1.66e-08;5!CL:0000240;3.15e-07;6!CL:0000311;3.15e-07;6!CL:0000079;3.15e-07;6!CL:0000237;3.15e-07;6!CL:0002620;7.41e-07;23|ontology_enrichment_celltype_v019_2=CL:0002621,1.24e-13,3;CL:0002159,3.55e-11,14;CL:0002591,1.21e-10,1;CL:0000362,3.36e-10,9;CL:0000312,1.54e-08,5;CL:0000240,2.96e-07,6;CL:0000311,2.96e-07,6;CL:0000079,2.96e-07,6;CL:0000237,2.96e-07,6;CL:0000036,2.96e-07,6;CL:0000357,2.96e-07,6;CL:0000114,2.96e-07,6;CL:0002620,7.08e-07,23|ontology_enrichment_development_v019=CL:0000357;3.15e-07;6!CL:0000114;3.15e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;3.23e-11;1!DOID:17;1.66e-08;5!DOID:450;1.66e-08;5!DOID:66;1.66e-08;5!DOID:423;1.66e-08;5!DOID:0080000;1.66e-08;5!DOID:11722;1.66e-08;5|ontology_enrichment_disease_v019_2=DOID:2513,3.41e-11,1;DOID:17,1.13e-08,5;DOID:450,1.13e-08,5;DOID:66,1.13e-08,5;DOID:423,1.13e-08,5;DOID:0080000,1.13e-08,5;DOID:11722,1.13e-08,5|ontology_enrichment_uberon=UBERON:0003102!4.53e-12!95;UBERON:0002199!3.56e-09!45;UBERON:0002416!3.56e-09!45;UBERON:0002097!6.24e-08!40|ontology_enrichment_uberon_v019=UBERON:0001949;1.40e-13;3!UBERON:0002199;3.90e-12;46!UBERON:0002416;3.90e-12;46!UBERON:0002097;6.05e-12;41!UBERON:0001828;3.17e-11;8!UBERON:0010371;1.09e-10;31!UBERON:0003102;3.55e-08;50!UBERON:0003729;4.23e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.45e-16,99;UBERON:0002097,4.94e-14,41;UBERON:0001949,1.24e-13,3;UBERON:0002199,2.11e-12,46;UBERON:0002416,2.11e-12,46;UBERON:0001828,2.86e-11,8;UBERON:0010188,3.57e-07,6;UBERON:0002539,3.57e-07,6;UBERON:0008816,3.57e-07,6;UBERON:0003729,3.98e-07,13|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.794455084879313,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.747243402759005,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0.612975591598039,0,0.226864366320042,1.61450672119976,0.213557388818567,0.211931901159562,1.20036438433761,0.206105058476878,1.03056216018252,0.37223371266318,4.72573730275545,0.779496041289589,0.757301322732344,0.276149695926898,0,0.355009592516614,0.906768884048762,0.847802961552438,0.966304265816484,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,1.1240175325762,1.40740561376283,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,1.17587489739202,0.708875486211932,1.16426079513703,0.581267877027924,0.383382679165211,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.771048469013278,0.532685175939381,0.492762936082855,0,0.232420756919918,0,1.00253235151642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0,2.29706215198469,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0.495854746082934,0.576570202095319,10.3366297120613,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0.329294892959902,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0.86101074534246,0,0,0.918893600827838,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4139 | |||
|TSSclassifier=W | |||
|UniProt=Q8TET4,E7EWB6 | |||
|association_with_transcript=149bp_to_ENST00000318010,ENST00000440615_5end | |||
|coexpression_cluster_id=C2333 | |||
|description=CAGE_peak_10_at_GANC_5end | |||
|id=chr15:42566589..42566606,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.27e-10!75;CL:0002620!1.53e-09!23;CL:0000055!5.03e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.40e-13;3!CL:0002159;3.79e-11;14!CL:0002591;8.20e-11;1!CL:0000362;3.63e-10;9!CL:0000312;1.66e-08;5!CL:0000240;3.15e-07;6!CL:0000311;3.15e-07;6!CL:0000079;3.15e-07;6!CL:0000237;3.15e-07;6!CL:0002620;7.41e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.24e-13,3;CL:0002159,3.55e-11,14;CL:0002591,1.21e-10,1;CL:0000362,3.36e-10,9;CL:0000312,1.54e-08,5;CL:0000240,2.96e-07,6;CL:0000311,2.96e-07,6;CL:0000079,2.96e-07,6;CL:0000237,2.96e-07,6;CL:0000036,2.96e-07,6;CL:0000357,2.96e-07,6;CL:0000114,2.96e-07,6;CL:0002620,7.08e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000357;3.15e-07;6!CL:0000114;3.15e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.23e-11;1!DOID:17;1.66e-08;5!DOID:450;1.66e-08;5!DOID:66;1.66e-08;5!DOID:423;1.66e-08;5!DOID:0080000;1.66e-08;5!DOID:11722;1.66e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.41e-11,1;DOID:17,1.13e-08,5;DOID:450,1.13e-08,5;DOID:66,1.13e-08,5;DOID:423,1.13e-08,5;DOID:0080000,1.13e-08,5;DOID:11722,1.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.53e-12!95;UBERON:0002199!3.56e-09!45;UBERON:0002416!3.56e-09!45;UBERON:0002097!6.24e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.40e-13;3!UBERON:0002199;3.90e-12;46!UBERON:0002416;3.90e-12;46!UBERON:0002097;6.05e-12;41!UBERON:0001828;3.17e-11;8!UBERON:0010371;1.09e-10;31!UBERON:0003102;3.55e-08;50!UBERON:0003729;4.23e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.45e-16,99;UBERON:0002097,4.94e-14,41;UBERON:0001949,1.24e-13,3;UBERON:0002199,2.11e-12,46;UBERON:0002416,2.11e-12,46;UBERON:0001828,2.86e-11,8;UBERON:0010188,3.57e-07,6;UBERON:0002539,3.57e-07,6;UBERON:0008816,3.57e-07,6;UBERON:0003729,3.98e-07,13 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.794455084879313,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.747243402759005,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0.612975591598039,0,0.226864366320042,1.61450672119976,0.213557388818567,0.211931901159562,1.20036438433761,0.206105058476878,1.03056216018252,0.37223371266318,4.72573730275545,0.779496041289589,0.757301322732344,0.276149695926898,0,0.355009592516614,0.906768884048762,0.847802961552438,0.966304265816484,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,1.1240175325762,1.40740561376283,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,1.17587489739202,0.708875486211932,1.16426079513703,0.581267877027924,0.383382679165211,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.771048469013278,0.532685175939381,0.492762936082855,0,0.232420756919918,0,1.00253235151642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0,2.29706215198469,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0.495854746082934,0.576570202095319,10.3366297120613,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0.329294892959902,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0.86101074534246,0,0,0.918893600827838,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.697118721393016,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0.435296032902013,0.34945333648406,0.343972064943233,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0.302461847526478,0,0.591420599958536,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.40341013740704,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0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| |||
|short_description=p10@GANC | |||
}} |
Revision as of 07:00, 11 September 2013
Short description: | p10@GANC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_GANC_5end |
Coexpression cluster: | C2333_Small_Fibroblast_skeletal_basal_Sebocyte_Mallassezderived_Keratinocyte |
Association with transcript: | 149bp_to_ENST00000318010, ENST00000440615_5end |
EntrezGene: | GANC |
HGNC: | 4139 |
UniProt: | Q8TET4E7EWB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.24e-13 | 3 |
general ecto-epithelial cell | 3.55e-11 | 14 |
smooth muscle cell of the pulmonary artery | 1.21e-10 | 1 |
epidermal cell | 3.36e-10 | 9 |
keratinocyte | 1.54e-08 | 5 |
stratified squamous epithelial cell | 2.96e-07 | 6 |
keratin accumulating cell | 2.96e-07 | 6 |
stratified epithelial cell | 2.96e-07 | 6 |
keratinizing barrier epithelial cell | 2.96e-07 | 6 |
epithelial fate stem cell | 2.96e-07 | 6 |
stratified epithelial stem cell | 2.96e-07 | 6 |
surface ectodermal cell | 2.96e-07 | 6 |
skin fibroblast | 7.08e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.45e-16 | 99 |
skin of body | 4.94e-14 | 41 |
gingival epithelium | 1.24e-13 | 3 |
integument | 2.11e-12 | 46 |
integumental system | 2.11e-12 | 46 |
gingiva | 2.86e-11 | 8 |
protuberance | 3.57e-07 | 6 |
pharyngeal arch | 3.57e-07 | 6 |
embryonic head | 3.57e-07 | 6 |
mouth mucosa | 3.98e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.41e-11 | 1 |
musculoskeletal system disease | 1.13e-08 | 5 |
myotonic disease | 1.13e-08 | 5 |
muscle tissue disease | 1.13e-08 | 5 |
myopathy | 1.13e-08 | 5 |
muscular disease | 1.13e-08 | 5 |
myotonic dystrophy | 1.13e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.