FFCP PHASE1:Hg19::chr15:39882081..39882094,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C453|description=CAGE_peak_at_chr15:39882081..39882094,+|id=chr15:39882081..39882094,+|ontology_enrichment_celltype=CL:0002139!2.04e-11!24;CL:0000055!2.98e-11!180;CL:0000115!8.06e-10!35;CL:0000057!1.35e-09!75;CL:0000071!3.28e-09!18;CL:0002546!3.28e-09!18;CL:0002620!1.60e-08!23;CL:0002078!5.90e-08!44;CL:0000222!6.06e-08!119;CL:1000413!4.89e-07!9|ontology_enrichment_celltype_v019=CL:0002139;6.93e-11;24!CL:0002620;9.37e-10;23!CL:0000115;9.06e-09;36!CL:0000071;6.91e-08;18!CL:0002544;1.70e-07;6|ontology_enrichment_celltype_v019_2=CL:0000057,5.55e-13,76;CL:0002139,2.10e-11,24;CL:0000115,4.71e-10,36;CL:0002620,8.30e-10,23;CL:0000071,2.82e-08,18;CL:0002546,2.82e-08,18;CL:0002078,3.28e-08,45;CL:0002544,9.47e-08,6;CL:1000413,7.97e-07,9;CL:0002580,9.81e-07,3|ontology_enrichment_development_v019=CL:0002546;6.91e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.03e-08;5!DOID:450;1.03e-08;5!DOID:66;1.03e-08;5!DOID:423;1.03e-08;5!DOID:0080000;1.03e-08;5!DOID:11722;1.03e-08;5|ontology_enrichment_disease_v019_2=DOID:17,9.98e-09,5;DOID:450,9.98e-09,5;DOID:66,9.98e-09,5;DOID:423,9.98e-09,5;DOID:0080000,9.98e-09,5;DOID:11722,9.98e-09,5|ontology_enrichment_uberon=UBERON:0004872!1.38e-16!84;UBERON:0000055!5.17e-16!69;UBERON:0001981!2.35e-15!60;UBERON:0007500!2.35e-15!60;UBERON:0004537!2.35e-15!60;UBERON:0006965!2.35e-15!60;UBERON:0002049!9.14e-14!79;UBERON:0007798!9.14e-14!79;UBERON:0001637!4.71e-13!42;UBERON:0003509!4.71e-13!42;UBERON:0004572!4.71e-13!42;UBERON:0003914!5.97e-12!118;UBERON:0001009!2.09e-11!113;UBERON:0004535!4.25e-11!110;UBERON:0004573!1.97e-09!33;UBERON:0004571!1.97e-09!33;UBERON:0001986!3.28e-09!18;UBERON:0004638!3.28e-09!18;UBERON:0004852!3.28e-09!18;UBERON:0000468!1.75e-08!659;UBERON:0000947!2.13e-08!21;UBERON:0010191!2.13e-08!21;UBERON:0000467!7.85e-08!625;UBERON:0000480!1.01e-07!626;UBERON:0002097!1.06e-07!40;UBERON:0000487!1.19e-07!22;UBERON:0003102!2.08e-07!95;UBERON:0002100!3.36e-07!216;UBERON:0003915!4.89e-07!9;UBERON:0004700!4.89e-07!9;UBERON:0001917!4.89e-07!9;UBERON:0003081!7.52e-07!216|ontology_enrichment_uberon_v019=UBERON:0003688;2.56e-10;6!UBERON:0002358;2.56e-10;6!UBERON:0003684;2.56e-10;6!UBERON:0001178;2.56e-10;6!UBERON:0000947;1.84e-09;21!UBERON:0010191;1.84e-09;21!UBERON:0004573;5.18e-08;33!UBERON:0004571;5.18e-08;33!UBERON:0004638;6.91e-08;18!UBERON:0001986;6.91e-08;18!UBERON:0004852;6.91e-08;18!UBERON:0000055;7.95e-08;65!UBERON:0001637;8.72e-08;42!UBERON:0003509;8.72e-08;42!UBERON:0004572;8.72e-08;42!UBERON:0007500;1.35e-07;56!UBERON:0001981;1.35e-07;56!UBERON:0004537;1.35e-07;56!UBERON:0000487;2.48e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.42e-14,68;UBERON:0007500,2.62e-12,59;UBERON:0001981,2.62e-12,59;UBERON:0004537,2.62e-12,59;UBERON:0006965,2.62e-12,59;UBERON:0002049,3.09e-11,78;UBERON:0007798,3.09e-11,78;UBERON:0004872,4.09e-11,83;UBERON:0003688,3.17e-10,6;UBERON:0002358,3.17e-10,6;UBERON:0003684,3.17e-10,6;UBERON:0001178,3.17e-10,6;UBERON:0000947,9.68e-10,21;UBERON:0010191,9.68e-10,21;UBERON:0001637,2.03e-09,42;UBERON:0003509,2.03e-09,42;UBERON:0004572,2.03e-09,42;UBERON:0004535,1.09e-08,109;UBERON:0004638,2.82e-08,18;UBERON:0001986,2.82e-08,18;UBERON:0004852,2.82e-08,18;UBERON:0001009,3.11e-08,112;UBERON:0004573,4.14e-08,33;UBERON:0004571,4.14e-08,33;UBERON:0000487,1.02e-07,22;UBERON:0003914,1.20e-07,117;UBERON:0003915,7.97e-07,9;UBERON:0004700,7.97e-07,9;UBERON:0001917,7.97e-07,9;UBERON:0003102,9.43e-07,99|phase1_expression=1.2717486548939,3.8538094300377,1.26858963686374,3.00219895059391,1.78784437770915,3.48935409640147,0,0.631719873426831,0,0,0,0.655324116390517,0.527533956456907,0,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0.6024118375565,0,0,0,0,0,1.00272223735071,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,1.16214518452842,0,0,1.7261543539329,0.256160706529101,0,2.06847408441971,0,0,0.564727018627814,0,0.224723484445085,1.22433556948361,0,0,0.989553900560148,0.199463657621632,0,3.19230162491442,1.70215567407342,0,1.25624332628372,0,0,0,0.368277635987565,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,0.434539556882471,2.3858578411533,1.45990461090791,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,2.42998351125316,9.61023501270816,0.838998872419812,0.550236083880135,1.46296476575767,0,0.71153252537342,2.00832367658802,1.61131726843659,0,0.732186172644509,2.20597848207521,1.62028389576352,0.535798369704479,3.36794058939255,2.92789849256638,0,1.89853131913626,0.549605231791222,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39882081..39882094,+ | |||
|id=chr15:39882081..39882094,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.04e-11!24;CL:0000055!2.98e-11!180;CL:0000115!8.06e-10!35;CL:0000057!1.35e-09!75;CL:0000071!3.28e-09!18;CL:0002546!3.28e-09!18;CL:0002620!1.60e-08!23;CL:0002078!5.90e-08!44;CL:0000222!6.06e-08!119;CL:1000413!4.89e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.93e-11;24!CL:0002620;9.37e-10;23!CL:0000115;9.06e-09;36!CL:0000071;6.91e-08;18!CL:0002544;1.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.55e-13,76;CL:0002139,2.10e-11,24;CL:0000115,4.71e-10,36;CL:0002620,8.30e-10,23;CL:0000071,2.82e-08,18;CL:0002546,2.82e-08,18;CL:0002078,3.28e-08,45;CL:0002544,9.47e-08,6;CL:1000413,7.97e-07,9;CL:0002580,9.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;6.91e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.03e-08;5!DOID:450;1.03e-08;5!DOID:66;1.03e-08;5!DOID:423;1.03e-08;5!DOID:0080000;1.03e-08;5!DOID:11722;1.03e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.98e-09,5;DOID:450,9.98e-09,5;DOID:66,9.98e-09,5;DOID:423,9.98e-09,5;DOID:0080000,9.98e-09,5;DOID:11722,9.98e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.38e-16!84;UBERON:0000055!5.17e-16!69;UBERON:0001981!2.35e-15!60;UBERON:0007500!2.35e-15!60;UBERON:0004537!2.35e-15!60;UBERON:0006965!2.35e-15!60;UBERON:0002049!9.14e-14!79;UBERON:0007798!9.14e-14!79;UBERON:0001637!4.71e-13!42;UBERON:0003509!4.71e-13!42;UBERON:0004572!4.71e-13!42;UBERON:0003914!5.97e-12!118;UBERON:0001009!2.09e-11!113;UBERON:0004535!4.25e-11!110;UBERON:0004573!1.97e-09!33;UBERON:0004571!1.97e-09!33;UBERON:0001986!3.28e-09!18;UBERON:0004638!3.28e-09!18;UBERON:0004852!3.28e-09!18;UBERON:0000468!1.75e-08!659;UBERON:0000947!2.13e-08!21;UBERON:0010191!2.13e-08!21;UBERON:0000467!7.85e-08!625;UBERON:0000480!1.01e-07!626;UBERON:0002097!1.06e-07!40;UBERON:0000487!1.19e-07!22;UBERON:0003102!2.08e-07!95;UBERON:0002100!3.36e-07!216;UBERON:0003915!4.89e-07!9;UBERON:0004700!4.89e-07!9;UBERON:0001917!4.89e-07!9;UBERON:0003081!7.52e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.56e-10;6!UBERON:0002358;2.56e-10;6!UBERON:0003684;2.56e-10;6!UBERON:0001178;2.56e-10;6!UBERON:0000947;1.84e-09;21!UBERON:0010191;1.84e-09;21!UBERON:0004573;5.18e-08;33!UBERON:0004571;5.18e-08;33!UBERON:0004638;6.91e-08;18!UBERON:0001986;6.91e-08;18!UBERON:0004852;6.91e-08;18!UBERON:0000055;7.95e-08;65!UBERON:0001637;8.72e-08;42!UBERON:0003509;8.72e-08;42!UBERON:0004572;8.72e-08;42!UBERON:0007500;1.35e-07;56!UBERON:0001981;1.35e-07;56!UBERON:0004537;1.35e-07;56!UBERON:0000487;2.48e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.42e-14,68;UBERON:0007500,2.62e-12,59;UBERON:0001981,2.62e-12,59;UBERON:0004537,2.62e-12,59;UBERON:0006965,2.62e-12,59;UBERON:0002049,3.09e-11,78;UBERON:0007798,3.09e-11,78;UBERON:0004872,4.09e-11,83;UBERON:0003688,3.17e-10,6;UBERON:0002358,3.17e-10,6;UBERON:0003684,3.17e-10,6;UBERON:0001178,3.17e-10,6;UBERON:0000947,9.68e-10,21;UBERON:0010191,9.68e-10,21;UBERON:0001637,2.03e-09,42;UBERON:0003509,2.03e-09,42;UBERON:0004572,2.03e-09,42;UBERON:0004535,1.09e-08,109;UBERON:0004638,2.82e-08,18;UBERON:0001986,2.82e-08,18;UBERON:0004852,2.82e-08,18;UBERON:0001009,3.11e-08,112;UBERON:0004573,4.14e-08,33;UBERON:0004571,4.14e-08,33;UBERON:0000487,1.02e-07,22;UBERON:0003914,1.20e-07,117;UBERON:0003915,7.97e-07,9;UBERON:0004700,7.97e-07,9;UBERON:0001917,7.97e-07,9;UBERON:0003102,9.43e-07,99 | |||
|phase1_expression=1.2717486548939,3.8538094300377,1.26858963686374,3.00219895059391,1.78784437770915,3.48935409640147,0,0.631719873426831,0,0,0,0.655324116390517,0.527533956456907,0,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0.6024118375565,0,0,0,0,0,1.00272223735071,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,1.16214518452842,0,0,1.7261543539329,0.256160706529101,0,2.06847408441971,0,0,0.564727018627814,0,0.224723484445085,1.22433556948361,0,0,0.989553900560148,0.199463657621632,0,3.19230162491442,1.70215567407342,0,1.25624332628372,0,0,0,0.368277635987565,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.722878304769133,0.50133791063589,0.434539556882471,2.3858578411533,1.45990461090791,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,2.42998351125316,9.61023501270816,0.838998872419812,0.550236083880135,1.46296476575767,0,0.71153252537342,2.00832367658802,1.61131726843659,0,0.732186172644509,2.20597848207521,1.62028389576352,0.535798369704479,3.36794058939255,2.92789849256638,0,1.89853131913626,0.549605231791222,0,0,0.436094052142534,6.95760732373446,1.64619665163954,0.926864265692532,2.29469296599051,0.709336764396714,0,3.20246987189115,1.2333377420858,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,5.94001428641027,5.43987244412825,0,0,0,0.125118519871964,0,3.07284334616587,3.37136575378922,4.5071417671979,0.113432183160021,4.84352016359927,2.34913127700424,1.05965950579781,1.50045548042201,1.64884046781502,3.34932702059318,1.48893485065272,1.85653965465393,1.36411807225678,2.01947019395292,1.19664868234989,0.80823028409406,1.42003837006646,0.806016785821122,0.508681776931463,0.386521706326594,1.09098448236334,1.43402297694502,0,0,0,0,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.98775256867763,0,0.100528972411631,0.277765335475589,0,0,0,0,0.117408694235822,1.73239737313289,1.38895653772983,1.52203321787679,0,0,0,0,0,0.93733833986777,2.51973192298289,0.992425680696705,0.447792613514241,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,0,1.42636905040718,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,5.19927153827018,4.81758269752337,4.57337003598411,3.74852527976682,0.902838299183157,2.27407504055985,0,0,0.553107505625109,0.695068915744663,0,0,0,0,0,0.303127571446259,0,0,2.72918588600655,3.99001130548962,3.36792113319688,1.15325234330131,2.55853624533352,3.21707842287215,0,0,0,0,0.519254429183621,0,0,1.60405176242628,0,0.574072240823034,0.182091168006717,0.393373244878272,0,0,0,0,0.105551628892876,0,0.680374821106063,1.72732732881711,3.08454505380579,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,1.6068392984416,0,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0,0,1.15699440752685,2.30628080838127,1.27612712494584,0.30347334256665,0,3.46293581513704,0,0,0,0.869932992075073,0.55597265731176,0.429374660225974,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0,0,0,1.26377536871694,0,0,1.05650146756755,0.272999822815972,0.565621727814851,1.13008116620243,1.10273068709225,0.66343897524122,0.876901770507525,0.578775534266688,0,1.01455188481352,1.239293992399,0.281695602532241,0,0,0.7133421029625,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0,1.29151611801369,1.68471475667626,0,0,0,0,0.569647187174163,0,0,0,0,0,0,13.474717973687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.593929361665277,4.30024982938925,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,1.24415835064723,1.16828856491525,0,0,1.28236427328014,0,3.33410970433911,0,0,0,1.82299432759663,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.638002319463839,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.174118413160805,0.873633341210151,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.480952921509202,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.815985741090574,0,0,0,0,1.71906176567983,0,1.67569440763353,0,2.15361907373044,0,0.429226048136571,0.669514372325618,0.134366944973453,20.537093361917,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0.157611414598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| |||
|short_description=p@chr15:39882081..39882094,+ | |||
}} |
Revision as of 06:50, 11 September 2013
Short description: | p@chr15:39882081..39882094, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39882081..39882094, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.55e-13 | 76 |
endothelial cell of vascular tree | 2.10e-11 | 24 |
endothelial cell | 4.71e-10 | 36 |
skin fibroblast | 8.30e-10 | 23 |
blood vessel endothelial cell | 2.82e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.82e-08 | 18 |
meso-epithelial cell | 3.28e-08 | 45 |
aortic endothelial cell | 9.47e-08 | 6 |
endothelial cell of artery | 7.97e-07 | 9 |
preadipocyte of the breast | 9.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.42e-14 | 68 |
epithelial tube open at both ends | 2.62e-12 | 59 |
blood vessel | 2.62e-12 | 59 |
blood vasculature | 2.62e-12 | 59 |
vascular cord | 2.62e-12 | 59 |
vasculature | 3.09e-11 | 78 |
vascular system | 3.09e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 4.09e-11 | 83 |
omentum | 3.17e-10 | 6 |
peritoneum | 3.17e-10 | 6 |
abdominal cavity | 3.17e-10 | 6 |
visceral peritoneum | 3.17e-10 | 6 |
aorta | 9.68e-10 | 21 |
aortic system | 9.68e-10 | 21 |
artery | 2.03e-09 | 42 |
arterial blood vessel | 2.03e-09 | 42 |
arterial system | 2.03e-09 | 42 |
cardiovascular system | 1.09e-08 | 109 |
blood vessel endothelium | 2.82e-08 | 18 |
endothelium | 2.82e-08 | 18 |
cardiovascular system endothelium | 2.82e-08 | 18 |
circulatory system | 3.11e-08 | 112 |
systemic artery | 4.14e-08 | 33 |
systemic arterial system | 4.14e-08 | 33 |
simple squamous epithelium | 1.02e-07 | 22 |
epithelial tube | 1.20e-07 | 117 |
endothelial tube | 7.97e-07 | 9 |
arterial system endothelium | 7.97e-07 | 9 |
endothelium of artery | 7.97e-07 | 9 |
surface structure | 9.43e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.98e-09 | 5 |
myotonic disease | 9.98e-09 | 5 |
muscle tissue disease | 9.98e-09 | 5 |
myopathy | 9.98e-09 | 5 |
muscular disease | 9.98e-09 | 5 |
myotonic dystrophy | 9.98e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.