FFCP PHASE1:Hg19::chr15:39875837..39875853,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:39875837..39875853,-|id=chr15:39875837..39875853,-|ontology_enrichment_celltype=CL:0000057!7.08e-16!75;CL:0002334!8.31e-12!12;CL:0000055!2.82e-11!180;CL:0002139!5.29e-10!24;CL:0002371!2.15e-09!591;CL:0000144!2.17e-09!625;CL:0000222!9.52e-08!119;CL:0000115!1.13e-07!35;CL:0000548!1.57e-07!679;CL:0000004!1.57e-07!679;CL:0000255!1.57e-07!679;CL:0000012!2.44e-07!682;CL:0000071!2.55e-07!18;CL:0002546!2.55e-07!18;CL:0000213!6.47e-07!57;CL:0000215!6.47e-07!57|ontology_enrichment_celltype_v019=CL:0002545;3.44e-18;2!CL:0002617;3.44e-18;2!CL:0002580;1.89e-12;3!CL:0002334;1.05e-11;12!CL:0000136;5.82e-11;13!CL:0002616;1.89e-10;1!CL:0002581;5.78e-10;1!CL:0000057;5.14e-07;73|ontology_enrichment_celltype_v019_2=CL:0002617,2.04e-18,2;CL:0002545,3.77e-18,2;CL:0002580,3.77e-12,3;CL:0000057,4.28e-12,76;CL:0002334,1.51e-11,12;CL:0002616,1.80e-10,1;CL:0002581,4.85e-10,1;CL:0000136,1.66e-09,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3571;2.36e-10;1|ontology_enrichment_disease_v019_2=DOID:3571,2.37e-10,1|ontology_enrichment_uberon=UBERON:0000055!4.62e-13!69;UBERON:0002049!7.29e-12!79;UBERON:0007798!7.29e-12!79;UBERON:0001981!1.21e-11!60;UBERON:0007500!1.21e-11!60;UBERON:0004537!1.21e-11!60;UBERON:0006965!1.21e-11!60;UBERON:0004872!2.47e-10!84;UBERON:0001637!1.31e-09!42;UBERON:0003509!1.31e-09!42;UBERON:0004572!1.31e-09!42;UBERON:0003688!9.00e-09!6;UBERON:0002358!9.00e-09!6;UBERON:0003684!9.00e-09!6;UBERON:0001178!9.00e-09!6;UBERON:0001009!2.33e-08!113;UBERON:0004535!3.36e-08!110;UBERON:0001986!2.55e-07!18;UBERON:0004638!2.55e-07!18;UBERON:0004852!2.55e-07!18;UBERON:0003914!8.83e-07!118|ontology_enrichment_uberon_v019=UBERON:0005406;1.14e-18;2!UBERON:0005800;3.44e-18;2!UBERON:0001515;3.44e-18;2!UBERON:0000310;5.28e-14;10!UBERON:0001443;9.45e-13;11|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.18e-19,2;UBERON:0005800,3.77e-18,2;UBERON:0001515,3.77e-18,2;UBERON:0000310,6.49e-14,10;UBERON:0001443,1.14e-12,11;UBERON:0002097,2.49e-07,41|phase1_expression=1.63510541343501,1.2846031433459,0.563817616383885,1.0007329835313,0.893922188854576,4.36169262050184,0,0,0,0,0,0,0.791300934685361,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0.835979866147242,0.775250277507987,0,0,0.402829317109147,0,0.488124115096339,1.10298924103761,1.62028389576352,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0.573673241497627,0,0,0,0.98667019366864,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0.277064115484183,0.438977620880838,1.83892677479412,0.600952235626387,0.453728732640084,7.89314397030993,0.427114777637135,0.211931901159562,0.600182192168805,0,2.06112432036503,0,0.168776332241266,0.194874010322397,4.03894038790583,0.0920498986422993,0,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0.286804595389004,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0.831883446123229,0.892144943985809,0.946214490203608,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0.248107807818777,1.07423381301644,1.12264037773229,0.128139149255701,0.511707249066704,1.12597744800525,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0.796191777397232,0.400027764663154,0,0.673498977531838,0,0,0,0,0.680117776536817,0.463044948647668,0.244736704506468,0.358177682162975,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:39875837..39875853,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:39875837..39875853,- | |||
|id=chr15:39875837..39875853,- | |||
|ontology_enrichment_celltype=CL:0000057!7.08e-16!75;CL:0002334!8.31e-12!12;CL:0000055!2.82e-11!180;CL:0002139!5.29e-10!24;CL:0002371!2.15e-09!591;CL:0000144!2.17e-09!625;CL:0000222!9.52e-08!119;CL:0000115!1.13e-07!35;CL:0000548!1.57e-07!679;CL:0000004!1.57e-07!679;CL:0000255!1.57e-07!679;CL:0000012!2.44e-07!682;CL:0000071!2.55e-07!18;CL:0002546!2.55e-07!18;CL:0000213!6.47e-07!57;CL:0000215!6.47e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002545;3.44e-18;2!CL:0002617;3.44e-18;2!CL:0002580;1.89e-12;3!CL:0002334;1.05e-11;12!CL:0000136;5.82e-11;13!CL:0002616;1.89e-10;1!CL:0002581;5.78e-10;1!CL:0000057;5.14e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,2.04e-18,2;CL:0002545,3.77e-18,2;CL:0002580,3.77e-12,3;CL:0000057,4.28e-12,76;CL:0002334,1.51e-11,12;CL:0002616,1.80e-10,1;CL:0002581,4.85e-10,1;CL:0000136,1.66e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;2.36e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.37e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!4.62e-13!69;UBERON:0002049!7.29e-12!79;UBERON:0007798!7.29e-12!79;UBERON:0001981!1.21e-11!60;UBERON:0007500!1.21e-11!60;UBERON:0004537!1.21e-11!60;UBERON:0006965!1.21e-11!60;UBERON:0004872!2.47e-10!84;UBERON:0001637!1.31e-09!42;UBERON:0003509!1.31e-09!42;UBERON:0004572!1.31e-09!42;UBERON:0003688!9.00e-09!6;UBERON:0002358!9.00e-09!6;UBERON:0003684!9.00e-09!6;UBERON:0001178!9.00e-09!6;UBERON:0001009!2.33e-08!113;UBERON:0004535!3.36e-08!110;UBERON:0001986!2.55e-07!18;UBERON:0004638!2.55e-07!18;UBERON:0004852!2.55e-07!18;UBERON:0003914!8.83e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.14e-18;2!UBERON:0005800;3.44e-18;2!UBERON:0001515;3.44e-18;2!UBERON:0000310;5.28e-14;10!UBERON:0001443;9.45e-13;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.18e-19,2;UBERON:0005800,3.77e-18,2;UBERON:0001515,3.77e-18,2;UBERON:0000310,6.49e-14,10;UBERON:0001443,1.14e-12,11;UBERON:0002097,2.49e-07,41 | |||
|phase1_expression=1.63510541343501,1.2846031433459,0.563817616383885,1.0007329835313,0.893922188854576,4.36169262050184,0,0,0,0,0,0,0.791300934685361,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0.835979866147242,0.775250277507987,0,0,0.402829317109147,0,0.488124115096339,1.10298924103761,1.62028389576352,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0.573673241497627,0,0,0,0.98667019366864,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0,0,0.277064115484183,0.438977620880838,1.83892677479412,0.600952235626387,0.453728732640084,7.89314397030993,0.427114777637135,0.211931901159562,0.600182192168805,0,2.06112432036503,0,0.168776332241266,0.194874010322397,4.03894038790583,0.0920498986422993,0,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0.286804595389004,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0.831883446123229,0.892144943985809,0.946214490203608,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0.248107807818777,1.07423381301644,1.12264037773229,0.128139149255701,0.511707249066704,1.12597744800525,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0.796191777397232,0.400027764663154,0,0.673498977531838,0,0,0,0,0.680117776536817,0.463044948647668,0.244736704506468,0.358177682162975,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:39875837..39875853,- | |||
}} |
Revision as of 06:48, 11 September 2013
Short description: | p@chr15:39875837..39875853, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39875837..39875853, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 2.04e-18 | 2 |
thoracic aorta endothelial cell | 3.77e-18 | 2 |
preadipocyte of the breast | 3.77e-12 | 3 |
fibroblast | 4.28e-12 | 76 |
preadipocyte | 1.51e-11 | 12 |
perirenal adipocyte cell | 1.80e-10 | 1 |
perirenal preadipocyte | 4.85e-10 | 1 |
fat cell | 1.66e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 9.18e-19 | 2 |
segment of aorta | 3.77e-18 | 2 |
thoracic aorta | 3.77e-18 | 2 |
breast | 6.49e-14 | 10 |
chest | 1.14e-12 | 11 |
skin of body | 2.49e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.37e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.