FFCP PHASE1:Hg19::chr14:87636652..87636657,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C789|description=CAGE_peak_at_chr14:87636652..87636657,-|id=chr14:87636652..87636657,-|ontology_enrichment_celltype=CL:0002586!1.49e-11!3;CL:0000064!5.03e-11!3;CL:0005012!5.03e-11!3;CL:0000067!5.03e-11!3;CL:0002304!5.03e-11!3;CL:0000149!9.52e-09!4;CL:0000147!3.24e-08!14;CL:0002549!3.98e-08!2;CL:0000325!9.68e-07!39|ontology_enrichment_celltype_v019=CL:0002586;1.04e-54;3!CL:0000149;2.90e-41;4!CL:0002549;1.42e-36;2!CL:0000147;4.15e-21;14!CL:0000342;1.30e-19;1!CL:0002565;1.30e-19;1!CL:0000306;7.41e-19;4!CL:0002222;7.41e-19;4!CL:0002224;7.41e-19;4!CL:0000064;2.79e-07;3!CL:0000067;2.79e-07;3!CL:0005012;2.79e-07;3!CL:0002304;2.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0002586,7.24e-55,3;CL:0000149,2.20e-41,4;CL:0002549,1.70e-36,2;CL:0000147,3.74e-21,14;CL:0000342,1.30e-19,1;CL:0002565,1.30e-19,1;CL:0000306,8.88e-19,4;CL:0002222,8.88e-19,4;CL:0002224,8.88e-19,4;CL:0000064,2.32e-07,3;CL:0000067,2.32e-07,3;CL:0005012,2.32e-07,3;CL:0002304,2.32e-07,3|ontology_enrichment_development_v019=UBERON:0003056;1.82e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003075!1.45e-36!86;UBERON:0007284!1.45e-36!86;UBERON:0002346!1.49e-34!90;UBERON:0005743!7.54e-27!86;UBERON:0003056!3.46e-26!61;UBERON:0007625!1.26e-24!11;UBERON:0000153!1.84e-24!129;UBERON:0007811!1.84e-24!129;UBERON:0000033!2.06e-24!123;UBERON:0000073!1.33e-23!94;UBERON:0001016!1.33e-23!94;UBERON:0002616!1.51e-21!59;UBERON:0007023!7.14e-21!115;UBERON:0004121!3.28e-20!169;UBERON:0001017!3.54e-20!82;UBERON:0001049!4.58e-20!57;UBERON:0005068!4.58e-20!57;UBERON:0006241!4.58e-20!57;UBERON:0007135!4.58e-20!57;UBERON:0000924!1.59e-19!173;UBERON:0006601!1.59e-19!173;UBERON:0000020!2.40e-19!23;UBERON:0000970!3.94e-19!20;UBERON:0000955!4.02e-19!69;UBERON:0006238!4.02e-19!69;UBERON:0001032!2.04e-18!24;UBERON:0004456!2.04e-18!24;UBERON:0002104!4.28e-18!21;UBERON:0000019!9.99e-17!19;UBERON:0000047!9.99e-17!19;UBERON:0004088!9.99e-17!19;UBERON:0003072!9.99e-17!19;UBERON:0003071!9.99e-17!19;UBERON:0004128!9.99e-17!19;UBERON:0001456!6.44e-15!21;UBERON:0000488!2.57e-14!4;UBERON:0001893!5.99e-14!34;UBERON:0002020!7.10e-14!34;UBERON:0003528!7.10e-14!34;UBERON:0002298!8.78e-14!8;UBERON:0002780!7.79e-13!41;UBERON:0001890!7.79e-13!41;UBERON:0006240!7.79e-13!41;UBERON:0003080!1.86e-12!42;UBERON:0002791!1.98e-12!33;UBERON:0000966!6.88e-12!5;UBERON:0005388!6.88e-12!5;UBERON:0001802!6.88e-12!5;UBERON:0001781!1.49e-11!3;UBERON:0001782!1.49e-11!3;UBERON:0005424!1.49e-11!3;UBERON:0002619!3.02e-11!22;UBERON:0001778!5.03e-11!3;UBERON:0001775!5.03e-11!3;UBERON:0002200!6.07e-11!11;UBERON:0006876!6.07e-11!11;UBERON:0000064!9.38e-11!219;UBERON:0001869!1.38e-10!32;UBERON:0005085!3.44e-10!29;UBERON:0006331!4.01e-10!3;UBERON:0001950!4.26e-10!20;UBERON:0000988!8.78e-10!3;UBERON:0000956!9.96e-10!25;UBERON:0000203!9.96e-10!25;UBERON:0002203!1.55e-09!6;UBERON:0001768!1.55e-09!6;UBERON:0003076!2.16e-09!15;UBERON:0003057!2.16e-09!15;UBERON:0004733!6.36e-09!12;UBERON:0002028!6.36e-09!12;UBERON:0007277!6.36e-09!12;UBERON:0000063!1.21e-08!97;UBERON:0001801!2.02e-08!14;UBERON:0004732!3.49e-08!13;UBERON:0003947!3.98e-08!2;UBERON:0005629!3.98e-08!2;UBERON:0005358!3.98e-08!2;UBERON:0001886!3.98e-08!2;UBERON:0004086!3.98e-08!2;UBERON:0005282!3.98e-08!2;UBERON:0005281!3.98e-08!2;UBERON:0000475!1.25e-07!365;UBERON:0000483!1.53e-07!309;UBERON:0000119!2.21e-07!312;UBERON:0002148!5.77e-07!2;UBERON:0009662!5.77e-07!2|ontology_enrichment_uberon_v019=UBERON:0007625;2.14e-79;11!UBERON:0000019;4.47e-60;19!UBERON:0000047;4.47e-60;19!UBERON:0004088;4.47e-60;19!UBERON:0010230;4.47e-60;19!UBERON:0000966;3.10e-58;5!UBERON:0005388;3.10e-58;5!UBERON:0001802;3.10e-58;5!UBERON:0000970;4.57e-57;20!UBERON:0001781;1.04e-54;3!UBERON:0001782;1.04e-54;3!UBERON:0002104;2.42e-54;21!UBERON:0001456;2.42e-54;21!UBERON:0000020;1.32e-49;23!UBERON:0001032;1.57e-47;24!UBERON:0004456;1.57e-47;24!UBERON:0005629;1.42e-36;2!UBERON:0005358;1.42e-36;2!UBERON:0001886;1.42e-36;2!UBERON:0004086;1.42e-36;2!UBERON:0005282;1.42e-36;2!UBERON:0005281;1.42e-36;2!UBERON:0010371;7.96e-27;31!UBERON:0006876;1.91e-26;11!UBERON:0001801;6.96e-21;14!UBERON:0002506;1.30e-19;1!UBERON:0001769;1.30e-19;1!UBERON:0000488;4.70e-19;4!UBERON:0010077;7.41e-19;4!UBERON:0005389;7.41e-19;4!UBERON:0000484;7.41e-19;4!UBERON:0000965;7.41e-19;4!UBERON:0001803;7.41e-19;4!UBERON:0001444;1.88e-16;48!UBERON:0000033;2.08e-15;50!UBERON:0005284;2.70e-15;5!UBERON:0002203;4.80e-13;6!UBERON:0001768;4.80e-13;6!UBERON:0002200;4.80e-13;6!UBERON:0000153;2.03e-12;54!UBERON:0007811;9.28e-11;52!UBERON:0001778;2.79e-07;3!UBERON:0001775;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.51e-79,11;UBERON:0000019,3.68e-57,20;UBERON:0000047,3.68e-57,20;UBERON:0010312,3.68e-57,20;UBERON:0004088,3.68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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_at_chr14:87636652..87636657,- | |||
|id=chr14:87636652..87636657,- | |||
|ontology_enrichment_celltype=CL:0002586!1.49e-11!3;CL:0000064!5.03e-11!3;CL:0005012!5.03e-11!3;CL:0000067!5.03e-11!3;CL:0002304!5.03e-11!3;CL:0000149!9.52e-09!4;CL:0000147!3.24e-08!14;CL:0002549!3.98e-08!2;CL:0000325!9.68e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.04e-54;3!CL:0000149;2.90e-41;4!CL:0002549;1.42e-36;2!CL:0000147;4.15e-21;14!CL:0000342;1.30e-19;1!CL:0002565;1.30e-19;1!CL:0000306;7.41e-19;4!CL:0002222;7.41e-19;4!CL:0002224;7.41e-19;4!CL:0000064;2.79e-07;3!CL:0000067;2.79e-07;3!CL:0005012;2.79e-07;3!CL:0002304;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.24e-55,3;CL:0000149,2.20e-41,4;CL:0002549,1.70e-36,2;CL:0000147,3.74e-21,14;CL:0000342,1.30e-19,1;CL:0002565,1.30e-19,1;CL:0000306,8.88e-19,4;CL:0002222,8.88e-19,4;CL:0002224,8.88e-19,4;CL:0000064,2.32e-07,3;CL:0000067,2.32e-07,3;CL:0005012,2.32e-07,3;CL:0002304,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.82e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr14:87636652..87636657,- | |||
}} |
Revision as of 05:49, 11 September 2013
Short description: | p@chr14:87636652..87636657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:87636652..87636657, - |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.24e-55 | 3 |
visual pigment cell | 2.20e-41 | 4 |
fibroblast of choroid plexus | 1.70e-36 | 2 |
pigment cell | 3.74e-21 | 14 |
pigment cell (sensu Vertebrata) | 1.30e-19 | 1 |
iris pigment epithelial cell | 1.30e-19 | 1 |
crystallin accumulating cell | 8.88e-19 | 4 |
vertebrate lens cell | 8.88e-19 | 4 |
lens epithelial cell | 8.88e-19 | 4 |
ciliated cell | 2.32e-07 | 3 |
ciliated epithelial cell | 2.32e-07 | 3 |
multi-ciliated epithelial cell | 2.32e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.32e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.