FFCP PHASE1:Hg19::chr14:28081790..28081795,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100505967|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000557359,NR_039992,uc001wqc.2_5end|coexpression_cluster_id=C753|description=CAGE_peak_2_at_LOC100505967_5end|id=chr14:28081790..28081795,+|ontology_enrichment_celltype=CL:0002586!1.12e-21!3;CL:0000149!2.11e-16!4;CL:0000313!5.40e-08!1|ontology_enrichment_celltype_v019=CL:0002586;2.81e-34;3!CL:0000149;5.23e-26;4!CL:0000147;3.76e-08;14|ontology_enrichment_celltype_v019_2=CL:0002586,2.81e-34,3;CL:0000149,5.23e-26,4;CL:0000147,3.76e-08,14|ontology_enrichment_development_v019=UBERON:0010122;1.00e-13;2!UBERON:0003918;6.13e-11;10!UBERON:0007687;6.13e-11;10|ontology_enrichment_disease=DOID:2152!5.40e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.10e-23!86;UBERON:0000966!1.86e-22!5;UBERON:0005388!1.86e-22!5;UBERON:0001802!1.86e-22!5;UBERON:0001781!1.12e-21!3;UBERON:0001782!1.12e-21!3;UBERON:0005424!1.12e-21!3;UBERON:0003056!1.78e-21!61;UBERON:0000073!3.87e-21!94;UBERON:0001016!3.87e-21!94;UBERON:0001869!1.44e-18!32;UBERON:0002791!5.69e-18!33;UBERON:0002020!2.07e-17!34;UBERON:0003528!2.07e-17!34;UBERON:0001893!2.07e-17!34;UBERON:0002780!2.91e-17!41;UBERON:0001890!2.91e-17!41;UBERON:0006240!2.91e-17!41;UBERON:0003080!8.14e-17!42;UBERON:0003075!1.45e-16!86;UBERON:0007284!1.45e-16!86;UBERON:0000369!3.90e-16!4;UBERON:0002435!3.90e-16!4;UBERON:0000204!3.90e-16!4;UBERON:0010082!3.90e-16!4;UBERON:0002346!1.07e-15!90;UBERON:0000955!1.30e-15!69;UBERON:0006238!1.30e-15!69;UBERON:0000033!1.49e-15!123;UBERON:0007023!3.48e-15!115;UBERON:0001017!8.20e-15!82;UBERON:0000153!1.14e-14!129;UBERON:0007811!1.14e-14!129;UBERON:0001049!2.82e-14!57;UBERON:0005068!2.82e-14!57;UBERON:0006241!2.82e-14!57;UBERON:0007135!2.82e-14!57;UBERON:0002616!9.99e-14!59;UBERON:0002619!2.63e-13!22;UBERON:0000349!7.09e-13!5;UBERON:0002420!1.76e-12!9;UBERON:0007245!1.76e-12!9;UBERON:0010009!1.76e-12!9;UBERON:0010011!1.76e-12!9;UBERON:0000454!1.76e-12!9;UBERON:0000956!1.12e-11!25;UBERON:0000203!1.12e-11!25;UBERON:0001950!8.10e-11!20;UBERON:0005383!2.65e-10!3;UBERON:0005382!2.65e-10!3;UBERON:0004121!2.81e-10!169;UBERON:0000924!5.85e-10!173;UBERON:0006601!5.85e-10!173;UBERON:0009663!1.95e-09!7;UBERON:0000970!1.81e-08!20;UBERON:0001874!2.71e-08!1;UBERON:0006834!4.11e-08!1;UBERON:0002104!4.70e-08!21;UBERON:0001882!4.71e-08!1;UBERON:0005403!4.71e-08!1;UBERON:0004911!5.40e-08!1;UBERON:0003112!7.59e-08!1;UBERON:0000032!7.59e-08!1;UBERON:0005253!7.59e-08!1;UBERON:0003128!7.59e-08!1;UBERON:0002241!7.59e-08!1;UBERON:0001703!7.59e-08!1;UBERON:0004761!7.59e-08!1;UBERON:0009617!7.59e-08!1;UBERON:0002022!8.12e-08!1;UBERON:0002308!1.95e-07!9;UBERON:0000125!1.95e-07!9;UBERON:0000020!2.49e-07!23;UBERON:0001032!5.15e-07!24;UBERON:0004456!5.15e-07!24|ontology_enrichment_uberon_v019=UBERON:0001781;2.81e-34;3!UBERON:0001782;2.81e-34;3!UBERON:0005383;1.17e-33;3!UBERON:0005382;1.17e-33;3!UBERON:0001874;9.79e-26;1!UBERON:0000369;1.52e-25;4!UBERON:0002435;1.52e-25;4!UBERON:0000204;1.52e-25;4!UBERON:0000966;4.92e-21;5!UBERON:0005388;4.92e-21;5!UBERON:0001802;4.92e-21;5!UBERON:0009663;4.53e-15;7!UBERON:0001873;1.00e-13;2!UBERON:0002420;5.99e-12;9!UBERON:0000125;5.99e-12;9!UBERON:0007245;5.99e-12;9!UBERON:0002308;5.99e-12;9!UBERON:0010009;5.99e-12;9!UBERON:0010011;5.99e-12;9!UBERON:0000454;5.99e-12;9!UBERON:0007625;4.03e-10;11!UBERON:0002791;1.13e-07;32!UBERON:0001869;6.75e-07;32!UBERON:0001893;6.78e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.81e-34,3;UBERON:0005424,2.81e-34,3;UBERON:0005383,1.27e-33,3;UBERON:0005382,1.27e-33,3;UBERON:0001781,5.23e-26,4;UBERON:0001874,1.26e-25,1;UBERON:0000369,1.62e-25,4;UBERON:0002435,1.62e-25,4;UBERON:0000204,1.62e-25,4;UBERON:0010082,1.62e-25,4;UBERON:0000966,1.03e-17,6;UBERON:0005388,1.03e-17,6;UBERON:0001802,1.03e-17,6;UBERON:0009663,4.69e-15,7;UBERON:0001873,9.40e-14,2;UBERON:0010122,9.40e-14,2;UBERON:0002420,6.16e-12,9;UBERON:0000125,6.16e-12,9;UBERON:0007245,6.16e-12,9;UBERON:0002308,6.16e-12,9;UBERON:0010009,6.16e-12,9;UBERON:0010011,6.16e-12,9;UBERON:0000454,6.16e-12,9;UBERON:0003056,3.00e-10,61;UBERON:0007625,4.03e-10,11;UBERON:0003075,1.06e-07,82;UBERON:0007284,1.06e-07,82;UBERON:0002791,2.21e-07,32;UBERON:0001869,2.21e-07,32;UBERON:0002346,2.36e-07,86;UBERON:0003528,5.41e-07,34;UBERON:0002020,5.41e-07,34;UBERON:0001893,5.41e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100505967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557359,NR_039992,uc001wqc.2_5end | |||
|coexpression_cluster_id=C753 | |||
|description=CAGE_peak_2_at_LOC100505967_5end | |||
|id=chr14:28081790..28081795,+ | |||
|ontology_enrichment_celltype=CL:0002586!1.12e-21!3;CL:0000149!2.11e-16!4;CL:0000313!5.40e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.81e-34;3!CL:0000149;5.23e-26;4!CL:0000147;3.76e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.81e-34,3;CL:0000149,5.23e-26,4;CL:0000147,3.76e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.00e-13;2!UBERON:0003918;6.13e-11;10!UBERON:0007687;6.13e-11;10 | |||
|ontology_enrichment_disease=DOID:2152!5.40e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.10e-23!86;UBERON:0000966!1.86e-22!5;UBERON:0005388!1.86e-22!5;UBERON:0001802!1.86e-22!5;UBERON:0001781!1.12e-21!3;UBERON:0001782!1.12e-21!3;UBERON:0005424!1.12e-21!3;UBERON:0003056!1.78e-21!61;UBERON:0000073!3.87e-21!94;UBERON:0001016!3.87e-21!94;UBERON:0001869!1.44e-18!32;UBERON:0002791!5.69e-18!33;UBERON:0002020!2.07e-17!34;UBERON:0003528!2.07e-17!34;UBERON:0001893!2.07e-17!34;UBERON:0002780!2.91e-17!41;UBERON:0001890!2.91e-17!41;UBERON:0006240!2.91e-17!41;UBERON:0003080!8.14e-17!42;UBERON:0003075!1.45e-16!86;UBERON:0007284!1.45e-16!86;UBERON:0000369!3.90e-16!4;UBERON:0002435!3.90e-16!4;UBERON:0000204!3.90e-16!4;UBERON:0010082!3.90e-16!4;UBERON:0002346!1.07e-15!90;UBERON:0000955!1.30e-15!69;UBERON:0006238!1.30e-15!69;UBERON:0000033!1.49e-15!123;UBERON:0007023!3.48e-15!115;UBERON:0001017!8.20e-15!82;UBERON:0000153!1.14e-14!129;UBERON:0007811!1.14e-14!129;UBERON:0001049!2.82e-14!57;UBERON:0005068!2.82e-14!57;UBERON:0006241!2.82e-14!57;UBERON:0007135!2.82e-14!57;UBERON:0002616!9.99e-14!59;UBERON:0002619!2.63e-13!22;UBERON:0000349!7.09e-13!5;UBERON:0002420!1.76e-12!9;UBERON:0007245!1.76e-12!9;UBERON:0010009!1.76e-12!9;UBERON:0010011!1.76e-12!9;UBERON:0000454!1.76e-12!9;UBERON:0000956!1.12e-11!25;UBERON:0000203!1.12e-11!25;UBERON:0001950!8.10e-11!20;UBERON:0005383!2.65e-10!3;UBERON:0005382!2.65e-10!3;UBERON:0004121!2.81e-10!169;UBERON:0000924!5.85e-10!173;UBERON:0006601!5.85e-10!173;UBERON:0009663!1.95e-09!7;UBERON:0000970!1.81e-08!20;UBERON:0001874!2.71e-08!1;UBERON:0006834!4.11e-08!1;UBERON:0002104!4.70e-08!21;UBERON:0001882!4.71e-08!1;UBERON:0005403!4.71e-08!1;UBERON:0004911!5.40e-08!1;UBERON:0003112!7.59e-08!1;UBERON:0000032!7.59e-08!1;UBERON:0005253!7.59e-08!1;UBERON:0003128!7.59e-08!1;UBERON:0002241!7.59e-08!1;UBERON:0001703!7.59e-08!1;UBERON:0004761!7.59e-08!1;UBERON:0009617!7.59e-08!1;UBERON:0002022!8.12e-08!1;UBERON:0002308!1.95e-07!9;UBERON:0000125!1.95e-07!9;UBERON:0000020!2.49e-07!23;UBERON:0001032!5.15e-07!24;UBERON:0004456!5.15e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.81e-34;3!UBERON:0001782;2.81e-34;3!UBERON:0005383;1.17e-33;3!UBERON:0005382;1.17e-33;3!UBERON:0001874;9.79e-26;1!UBERON:0000369;1.52e-25;4!UBERON:0002435;1.52e-25;4!UBERON:0000204;1.52e-25;4!UBERON:0000966;4.92e-21;5!UBERON:0005388;4.92e-21;5!UBERON:0001802;4.92e-21;5!UBERON:0009663;4.53e-15;7!UBERON:0001873;1.00e-13;2!UBERON:0002420;5.99e-12;9!UBERON:0000125;5.99e-12;9!UBERON:0007245;5.99e-12;9!UBERON:0002308;5.99e-12;9!UBERON:0010009;5.99e-12;9!UBERON:0010011;5.99e-12;9!UBERON:0000454;5.99e-12;9!UBERON:0007625;4.03e-10;11!UBERON:0002791;1.13e-07;32!UBERON:0001869;6.75e-07;32!UBERON:0001893;6.78e-07;34 | |||
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|short_description=p2@LOC100505967 | |||
}} |
Revision as of 04:14, 11 September 2013
Short description: | p2@LOC100505967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100505967_5end |
Coexpression cluster: | C753_Retinal_retina_eye_kidney_caudate_corpus_putamen |
Association with transcript: | 0bp_to_ENST00000557359, NR_039992, uc001wqc.2_5end |
EntrezGene: | LOC100505967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.81e-34 | 3 |
visual pigment cell | 5.23e-26 | 4 |
pigment cell | 3.76e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.81e-34 | 3 |
presumptive retinal pigmented epithelium | 2.81e-34 | 3 |
caudate-putamen | 1.27e-33 | 3 |
dorsal striatum | 1.27e-33 | 3 |
layer of retina | 5.23e-26 | 4 |
putamen | 1.26e-25 | 1 |
corpus striatum | 1.62e-25 | 4 |
striatum | 1.62e-25 | 4 |
ventral part of telencephalon | 1.62e-25 | 4 |
future corpus striatum | 1.62e-25 | 4 |
retina | 1.03e-17 | 6 |
photoreceptor array | 1.03e-17 | 6 |
posterior segment of eyeball | 1.03e-17 | 6 |
telencephalic nucleus | 4.69e-15 | 7 |
caudate nucleus | 9.40e-14 | 2 |
future caudate nucleus | 9.40e-14 | 2 |
basal ganglion | 6.16e-12 | 9 |
neural nucleus | 6.16e-12 | 9 |
nuclear complex of neuraxis | 6.16e-12 | 9 |
nucleus of brain | 6.16e-12 | 9 |
aggregate regional part of brain | 6.16e-12 | 9 |
collection of basal ganglia | 6.16e-12 | 9 |
cerebral subcortex | 6.16e-12 | 9 |
pre-chordal neural plate | 3.00e-10 | 61 |
pigment epithelium of eye | 4.03e-10 | 11 |
neural plate | 1.06e-07 | 82 |
presumptive neural plate | 1.06e-07 | 82 |
regional part of telencephalon | 2.21e-07 | 32 |
cerebral hemisphere | 2.21e-07 | 32 |
neurectoderm | 2.36e-07 | 86 |
brain grey matter | 5.41e-07 | 34 |
gray matter | 5.41e-07 | 34 |
telencephalon | 5.41e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.