FFCP PHASE1:Hg19::chr14:103523689..103523716,-: Difference between revisions
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{{FFCP | 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.80137996598408,1.41828927698629,0,1.2401207790071,2.34638497717455,1.64092442705466,2.19303106742873,1.48863353516788,1.58284119923659,1.91643641459393,3.74991285114801,1.00885116665647,0.606965604236632,1.36597314810779,1.06442844195167,0.230467975111559,1.54339208493677,1.76721305739762,1.90741043332262,3.78220290828698,1.77970243027311,2.19780659981439,0.628462359664008,2.24217730651031,2.73947616152849,3.67076905071656,2.8665101273223,2.287249413653,0,0.581207126840626,1.04314963381548,4.00855682365126,6.00926876072807,10.072390148543,17.9727512071664,0.860454717640555,0.591660003652827,0.766920642832419,2.54032230114557,5.26945797651315,14.2694937405587,7.64431151181946,13.0870855203417,0.883352102537187,3.53561982448581,1.94228651156368,0.923965261706223,1.1598144313382,2.4285549652957,0.935757853848423,0.198950775161368,0.356760272332706,0.5647304101948,0.109940516745429,0,16.5152698351002,6.33822725461476,0.940634592723046,1.22574160876953,1.17838273550813,1.76677620403451,0.891139200981258,1.2679671827502,5.43766767001014,0.939839179798536,2.51385763096951,2.69841120997308,4.82095634235275,1.41157948686277,0.802413666891683,1.46067277649303,2.2936464170227,2.58011249672612,1.26217249754548,2.37970215668201,0.436350690340377,6.87734892670021,2.60396512716726,6.00828317220844,9.08515780459957,0.504665699340316,0.546327859818478,1.0135880080915,0.407955318967927,0,0.643264296743914,0.250707539292375,2.80381183407486,3.7514978221865,0.829169439458779,2.37895890482359,2.55880778281177,1.42838658878244,0.452122368852043,0.682821857254437,3.13969215225718,1.14564884900697,2.62752345645685,2.61260097476354,0.342233301085281,3.43495470374396,3.58611026963382,2.32862249582209,1.30245229777559,0.320182037633146,1.9307228228694,24.1629793666719,0,1.71138021856013,1.22068853494722,3.32878387092756,1.81146414231924,0.320568492303233|short_description=p3@CDC42BPB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1738 | |||
|TSSclassifier=S | |||
|UniProt=Q86XZ8,Q9Y5S2 | |||
|association_with_transcript=25bp_to_NM_006035,uc001ymi.1_5end | |||
|description=CAGE_peak_3_at_CDC42BPB_5end | |||
|id=chr14:103523689..103523716,- | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-12!254;CL:0000222!1.77e-09!119;CL:0000220!5.69e-09!246;CL:0002321!1.53e-08!248;CL:0002139!6.43e-08!24;CL:0000057!3.70e-07!75;CL:0000071!3.88e-07!18;CL:0002546!3.88e-07!18;CL:0002334!5.16e-07!12;CL:0000136!8.43e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.66e-08;24!CL:0002334;1.80e-07;12!CL:0000071;3.12e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.53e-10,253;CL:0000222,9.20e-09,121;CL:0002139,4.68e-08,24;CL:0002334,2.26e-07,12;CL:0000071,3.34e-07,18;CL:0002546,3.34e-07,18;CL:0000136,3.81e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;3.12e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;3.19e-08;33!UBERON:0004571;3.19e-08;33!UBERON:0001637;3.43e-08;42!UBERON:0003509;3.43e-08;42!UBERON:0004572;3.43e-08;42!UBERON:0004638;3.12e-07;18!UBERON:0001986;3.12e-07;18!UBERON:0004852;3.12e-07;18!UBERON:0000055;5.73e-07;65!UBERON:0007500;8.38e-07;56!UBERON:0001981;8.38e-07;56!UBERON:0004537;8.38e-07;56 | |||
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| |||
|short_description=p3@CDC42BPB | |||
}} |
Revision as of 03:22, 11 September 2013
Short description: | p3@CDC42BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CDC42BPB_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_006035, uc001ymi.1_5end |
EntrezGene: | CDC42BPB |
HGNC: | 1738 |
UniProt: | Q86XZ8Q9Y5S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.53e-10 | 253 |
mesodermal cell | 9.20e-09 | 121 |
endothelial cell of vascular tree | 4.68e-08 | 24 |
preadipocyte | 2.26e-07 | 12 |
blood vessel endothelial cell | 3.34e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.34e-07 | 18 |
fat cell | 3.81e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 4.77e-15 | 240 |
epithelial tube | 5.90e-15 | 117 |
vessel | 1.15e-13 | 68 |
epithelial tube open at both ends | 1.91e-12 | 59 |
blood vessel | 1.91e-12 | 59 |
blood vasculature | 1.91e-12 | 59 |
vascular cord | 1.91e-12 | 59 |
vasculature | 7.10e-12 | 78 |
vascular system | 7.10e-12 | 78 |
splanchnic layer of lateral plate mesoderm | 2.66e-11 | 83 |
artery | 5.94e-11 | 42 |
arterial blood vessel | 5.94e-11 | 42 |
arterial system | 5.94e-11 | 42 |
tube | 1.10e-10 | 192 |
systemic artery | 8.51e-09 | 33 |
systemic arterial system | 8.51e-09 | 33 |
trunk | 7.84e-08 | 199 |
subdivision of digestive tract | 2.28e-07 | 118 |
epithelium | 2.55e-07 | 306 |
digestive system | 2.60e-07 | 145 |
digestive tract | 2.60e-07 | 145 |
primitive gut | 2.60e-07 | 145 |
endoderm-derived structure | 3.20e-07 | 160 |
endoderm | 3.20e-07 | 160 |
presumptive endoderm | 3.20e-07 | 160 |
blood vessel endothelium | 3.34e-07 | 18 |
endothelium | 3.34e-07 | 18 |
cardiovascular system endothelium | 3.34e-07 | 18 |
cell layer | 3.51e-07 | 309 |
circulatory system | 8.33e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.