FFCP PHASE1:Hg19::chr14:102290158..102290200,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5527|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9311|TSSclassifier=S|UniProt=|association_with_transcript=-14bp_to_ENST00000553842_5end|coexpression_cluster_id=C18|description=CAGE_peak_8_at_PPP2R5C_5end|id=chr14:102290158..102290200,+|ontology_enrichment_celltype=CL:0000738!2.71e-54!140;CL:0002087!5.97e-45!119;CL:0002031!6.12e-41!124;CL:0000037!3.27e-40!172;CL:0000566!3.27e-40!172;CL:0000988!1.96e-39!182;CL:0002032!2.59e-36!165;CL:0000837!2.59e-36!165;CL:0000542!5.96e-36!53;CL:0000051!5.96e-36!53;CL:0000838!1.96e-35!52;CL:0000791!8.02e-21!18;CL:0000789!8.02e-21!18;CL:0002420!8.02e-21!18;CL:0002419!8.02e-21!18;CL:0000790!8.02e-21!18;CL:0000084!3.95e-19!25;CL:0000827!3.95e-19!25;CL:0002057!6.58e-15!42;CL:0000945!3.60e-14!24;CL:0000826!3.60e-14!24;CL:0000625!2.39e-13!11;CL:0000766!2.46e-13!76;CL:0000860!3.07e-13!45;CL:0002009!1.81e-11!65;CL:0000557!6.07e-11!71;CL:0000236!1.25e-10!14;CL:0002194!1.43e-10!63;CL:0000576!1.43e-10!63;CL:0000040!1.43e-10!63;CL:0000559!1.43e-10!63;CL:0000839!8.66e-10!70;CL:0000763!3.34e-09!112;CL:0000049!3.34e-09!112;CL:0000624!3.47e-08!6;CL:0000080!5.71e-07!6|ontology_enrichment_celltype_v019=CL:0000791;3.24e-34;18!CL:0000789;3.24e-34;18!CL:0002419;3.24e-34;18!CL:0000084;2.72e-28;25!CL:0000542;3.49e-26;53!CL:0000625;1.65e-21;11!CL:0000945;3.68e-14;24!CL:0000624;9.28e-13;6!CL:0002087;1.83e-12;104!CL:0000236;3.02e-11;13!CL:0000094;7.96e-08;8!CL:0000623;2.06e-07;3!CL:0000898;2.26e-07;3!CL:0000081;2.52e-07;11!CL:0000738;2.54e-07;136|ontology_enrichment_celltype_v019_2=CL:0000838,9.16e-46,52;CL:0000542,1.16e-44,53;CL:0000051,1.16e-44,53;CL:0000738,1.23e-39,136;CL:0000791,3.46e-34,18;CL:0000789,3.46e-34,18;CL:0002420,3.46e-34,18;CL:0002419,3.46e-34,18;CL:0000790,3.46e-34,18;CL:0002087,8.51e-32,115;CL:0000988,1.21e-29,177;CL:0000037,1.30e-28,168;CL:0000084,3.31e-28,25;CL:0000827,3.31e-28,25;CL:0002031,9.66e-27,120;CL:0002032,1.24e-25,161;CL:0000837,1.24e-25,161;CL:0000625,1.70e-21,11;CL:0000945,2.94e-14,24;CL:0000826,2.94e-14,24;CL:0000624,9.12e-13,6;CL:0000236,1.39e-12,14;CL:0000094,6.69e-08,8;CL:0000081,2.12e-07,11;CL:0000623,2.17e-07,3;CL:0000825,2.17e-07,3;CL:0000898,2.21e-07,3|ontology_enrichment_development_v019=CL:0000790;3.24e-34;18!CL:0000051;3.49e-26;53|ontology_enrichment_disease=DOID:0060058!5.12e-07!10|ontology_enrichment_disease_v019=DOID:0060058;1.09e-07;10|ontology_enrichment_disease_v019_2=DOID:0060058,1.15e-07,10|ontology_enrichment_uberon=UBERON:0002390!1.31e-21!102;UBERON:0003061!1.31e-21!102;UBERON:0002193!1.19e-19!112;UBERON:0000178!1.82e-15!15;UBERON:0000179!1.82e-15!15;UBERON:0000463!1.82e-15!15;UBERON:0002371!1.78e-08!80;UBERON:0007023!4.53e-08!115;UBERON:0001474!3.59e-07!86;UBERON:0004177!4.65e-07!7;UBERON:0002405!5.44e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-25;15!UBERON:0000179;4.66e-25;15!UBERON:0000463;4.66e-25;15!UBERON:0002390;1.92e-14;32!UBERON:0002193;2.81e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.32e-25,15;UBERON:0000179,4.32e-25,15;UBERON:0000463,4.32e-25,15;UBERON:0002390,4.47e-11,98;UBERON:0003061,4.47e-11,98;UBERON:0002193,4.72e-10,108;UBERON:0004177,1.50e-08,7;UBERON:0005057,1.50e-08,7;UBERON:0002370,1.18e-07,4;UBERON:0005058,1.18e-07,4;UBERON:0009113,1.18e-07,4;UBERON:0003295,1.18e-07,4;UBERON:0005562,1.18e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.328402357799783,0.236132343941038,6.68719270643137,24.5650814782216,2.94150634300544,0,0,0,1.16200800870452,3.41206157969812,0,2.76997704265939,7.01905566145496,4.99125002646459,0.895661896959697,0.971680998056939,0.515151135268373,0.290796477559129,1.13362783106643,0.485168122375632,0.929716147622738,0.822335776043652,0,0.575384784644301,0.768482119587302,0.47296445977717,1.72372840368309,0.645484683583826,0,0.376484679085209,1.09162460023138,0.224723484445085,1.53041946185451,1.28371610830437,1.27867425159808,0.989553900560148,1.19678194572979,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.75374599577023,1.0429658368404,0.65156653411535,0,2.20966581592539,0.632924774881769,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,3.51992488922645,3.27683166757279,1.77901850772711,2.13365111283254,0.800791974072025,3.4485146397269,1.98313461835459,0.954053754535364,2.27685187643779,2.93618594685469,1.91136614062614,0,9.52864557068611,0,20.2611063217248,21.6155919512041,15.6257139239627,20.5639389330534,23.7923254642521,24.1458380924714,38.9653456815823,22.3935018339199,22.3900489680876,19.4949827233587,34.121286834392,6.53265730600943,8.32379824383221,14.7994114143309,16.8573510849367,23.4740499445393,23.1327038532814,25.9514603247022,12.5442628565972,24.3615086799767,37.9388288665902,48.1078423675682,52.6280959400566,18.1582286164735,12.370585623272,18.0585888445191,16.1115377413217,19.581951506626,17.4903017173284,17.5215166512572,21.3493279199472,31.2490451998335,27.8137803614848,19.8409433319435,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9311 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000553842_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_PPP2R5C_5end | |||
|id=chr14:102290158..102290200,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.71e-54!140;CL:0002087!5.97e-45!119;CL:0002031!6.12e-41!124;CL:0000037!3.27e-40!172;CL:0000566!3.27e-40!172;CL:0000988!1.96e-39!182;CL:0002032!2.59e-36!165;CL:0000837!2.59e-36!165;CL:0000542!5.96e-36!53;CL:0000051!5.96e-36!53;CL:0000838!1.96e-35!52;CL:0000791!8.02e-21!18;CL:0000789!8.02e-21!18;CL:0002420!8.02e-21!18;CL:0002419!8.02e-21!18;CL:0000790!8.02e-21!18;CL:0000084!3.95e-19!25;CL:0000827!3.95e-19!25;CL:0002057!6.58e-15!42;CL:0000945!3.60e-14!24;CL:0000826!3.60e-14!24;CL:0000625!2.39e-13!11;CL:0000766!2.46e-13!76;CL:0000860!3.07e-13!45;CL:0002009!1.81e-11!65;CL:0000557!6.07e-11!71;CL:0000236!1.25e-10!14;CL:0002194!1.43e-10!63;CL:0000576!1.43e-10!63;CL:0000040!1.43e-10!63;CL:0000559!1.43e-10!63;CL:0000839!8.66e-10!70;CL:0000763!3.34e-09!112;CL:0000049!3.34e-09!112;CL:0000624!3.47e-08!6;CL:0000080!5.71e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.24e-34;18!CL:0000789;3.24e-34;18!CL:0002419;3.24e-34;18!CL:0000084;2.72e-28;25!CL:0000542;3.49e-26;53!CL:0000625;1.65e-21;11!CL:0000945;3.68e-14;24!CL:0000624;9.28e-13;6!CL:0002087;1.83e-12;104!CL:0000236;3.02e-11;13!CL:0000094;7.96e-08;8!CL:0000623;2.06e-07;3!CL:0000898;2.26e-07;3!CL:0000081;2.52e-07;11!CL:0000738;2.54e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.16e-46,52;CL:0000542,1.16e-44,53;CL:0000051,1.16e-44,53;CL:0000738,1.23e-39,136;CL:0000791,3.46e-34,18;CL:0000789,3.46e-34,18;CL:0002420,3.46e-34,18;CL:0002419,3.46e-34,18;CL:0000790,3.46e-34,18;CL:0002087,8.51e-32,115;CL:0000988,1.21e-29,177;CL:0000037,1.30e-28,168;CL:0000084,3.31e-28,25;CL:0000827,3.31e-28,25;CL:0002031,9.66e-27,120;CL:0002032,1.24e-25,161;CL:0000837,1.24e-25,161;CL:0000625,1.70e-21,11;CL:0000945,2.94e-14,24;CL:0000826,2.94e-14,24;CL:0000624,9.12e-13,6;CL:0000236,1.39e-12,14;CL:0000094,6.69e-08,8;CL:0000081,2.12e-07,11;CL:0000623,2.17e-07,3;CL:0000825,2.17e-07,3;CL:0000898,2.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.24e-34;18!CL:0000051;3.49e-26;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.12e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.09e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.15e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-21!102;UBERON:0003061!1.31e-21!102;UBERON:0002193!1.19e-19!112;UBERON:0000178!1.82e-15!15;UBERON:0000179!1.82e-15!15;UBERON:0000463!1.82e-15!15;UBERON:0002371!1.78e-08!80;UBERON:0007023!4.53e-08!115;UBERON:0001474!3.59e-07!86;UBERON:0004177!4.65e-07!7;UBERON:0002405!5.44e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-25;15!UBERON:0000179;4.66e-25;15!UBERON:0000463;4.66e-25;15!UBERON:0002390;1.92e-14;32!UBERON:0002193;2.81e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.32e-25,15;UBERON:0000179,4.32e-25,15;UBERON:0000463,4.32e-25,15;UBERON:0002390,4.47e-11,98;UBERON:0003061,4.47e-11,98;UBERON:0002193,4.72e-10,108;UBERON:0004177,1.50e-08,7;UBERON:0005057,1.50e-08,7;UBERON:0002370,1.18e-07,4;UBERON:0005058,1.18e-07,4;UBERON:0009113,1.18e-07,4;UBERON:0003295,1.18e-07,4;UBERON:0005562,1.18e-07,4 | |||
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| |||
|short_description=p8@PPP2R5C | |||
}} |
Revision as of 03:18, 11 September 2013
Short description: | p8@PPP2R5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PPP2R5C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -14bp_to_ENST00000553842_5end |
EntrezGene: | PPP2R5C |
HGNC: | 9311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.16e-46 | 52 |
lymphocyte | 1.16e-44 | 53 |
common lymphoid progenitor | 1.16e-44 | 53 |
leukocyte | 1.23e-39 | 136 |
mature alpha-beta T cell | 3.46e-34 | 18 |
alpha-beta T cell | 3.46e-34 | 18 |
immature T cell | 3.46e-34 | 18 |
mature T cell | 3.46e-34 | 18 |
immature alpha-beta T cell | 3.46e-34 | 18 |
nongranular leukocyte | 8.51e-32 | 115 |
hematopoietic cell | 1.21e-29 | 177 |
hematopoietic stem cell | 1.30e-28 | 168 |
T cell | 3.31e-28 | 25 |
pro-T cell | 3.31e-28 | 25 |
hematopoietic lineage restricted progenitor cell | 9.66e-27 | 120 |
hematopoietic oligopotent progenitor cell | 1.24e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-25 | 161 |
CD8-positive, alpha-beta T cell | 1.70e-21 | 11 |
lymphocyte of B lineage | 2.94e-14 | 24 |
pro-B cell | 2.94e-14 | 24 |
CD4-positive, alpha-beta T cell | 9.12e-13 | 6 |
B cell | 1.39e-12 | 14 |
granulocyte | 6.69e-08 | 8 |
blood cell | 2.12e-07 | 11 |
natural killer cell | 2.17e-07 | 3 |
pro-NK cell | 2.17e-07 | 3 |
naive T cell | 2.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.32e-25 | 15 |
haemolymphatic fluid | 4.32e-25 | 15 |
organism substance | 4.32e-25 | 15 |
hematopoietic system | 4.47e-11 | 98 |
blood island | 4.47e-11 | 98 |
hemolymphoid system | 4.72e-10 | 108 |
hemopoietic organ | 1.50e-08 | 7 |
immune organ | 1.50e-08 | 7 |
thymus | 1.18e-07 | 4 |
hemolymphoid system gland | 1.18e-07 | 4 |
thymic region | 1.18e-07 | 4 |
pharyngeal gland | 1.18e-07 | 4 |
thymus primordium | 1.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.15e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.