FFCP PHASE1:Hg19::chr13:75900881..75900923,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9882|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19165|TSSclassifier=N|UniProt=|association_with_transcript=-495bp_to_ENST00000488955_5end|coexpression_cluster_id=C103|description=CAGE_peak_2_at_TBC1D4_5end|id=chr13:75900881..75900923,-|ontology_enrichment_celltype=CL:0002139!6.11e-15!24;CL:0000115!1.05e-14!35;CL:0000791!2.98e-13!18;CL:0000789!2.98e-13!18;CL:0002420!2.98e-13!18;CL:0002419!2.98e-13!18;CL:0000790!2.98e-13!18;CL:0002078!4.45e-12!44;CL:0000738!4.68e-12!140;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000838!1.79e-11!52;CL:0000071!2.61e-11!18;CL:0002546!2.61e-11!18;CL:0000542!5.62e-11!53;CL:0000051!5.62e-11!53;CL:0000213!6.94e-11!57;CL:0000215!6.94e-11!57;CL:0002087!1.28e-10!119;CL:0000625!1.28e-09!11;CL:0000037!1.83e-09!172;CL:0000566!1.83e-09!172;CL:0002031!2.92e-09!124;CL:0000988!2.78e-08!182;CL:0002032!4.43e-08!165;CL:0000837!4.43e-08!165|ontology_enrichment_celltype_v019=CL:0002139;1.28e-22;24!CL:0000791;1.31e-20;18!CL:0000789;1.31e-20;18!CL:0002419;1.31e-20;18!CL:0000115;1.36e-19;36!CL:0000071;7.35e-17;18!CL:0000084;1.86e-16;25!CL:0000625;2.33e-14;11!CL:0002078;1.22e-12;45!CL:0000213;9.87e-10;58!CL:0000215;9.87e-10;58!CL:0000624;1.75e-09;6!CL:1000413;8.22e-09;9!CL:0002138;2.50e-07;6!CL:0002544;8.14e-07;6|ontology_enrichment_celltype_v019_2=CL:0000115,2.15e-23,36;CL:0002139,8.65e-23,24;CL:0000791,1.38e-20,18;CL:0000789,1.38e-20,18;CL:0002420,1.38e-20,18;CL:0002419,1.38e-20,18;CL:0000790,1.38e-20,18;CL:0002078,4.32e-18,45;CL:0000071,5.07e-17,18;CL:0002546,5.07e-17,18;CL:0000084,2.13e-16,25;CL:0000827,2.13e-16,25;CL:0000213,1.02e-15,58;CL:0000215,1.02e-15,58;CL:0000625,2.43e-14,11;CL:0000738,3.66e-14,136;CL:0000838,2.32e-12,52;CL:0002087,4.51e-12,115;CL:0000542,5.85e-12,53;CL:0000051,5.85e-12,53;CL:0002031,4.19e-10,120;CL:0000037,1.51e-09,168;CL:0000624,1.77e-09,6;CL:1000413,6.88e-09,9;CL:0002032,9.90e-09,161;CL:0000837,9.90e-09,161;CL:0000988,2.70e-08,177;CL:0005020,2.47e-07,6;CL:0002138,2.47e-07,6;CL:0005022,2.47e-07,6;CL:0002544,7.10e-07,6;CL:0002543,8.60e-07,6|ontology_enrichment_development_v019=CL:0000790;1.31e-20;18!CL:0002546;7.35e-17;18!CL:0005022;2.50e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!2.61e-11!18;UBERON:0004638!2.61e-11!18;UBERON:0004852!2.61e-11!18;UBERON:0007023!6.83e-08!115;UBERON:0000487!6.91e-08!22;UBERON:0002193!2.44e-07!112|ontology_enrichment_uberon_v019=UBERON:0004638;7.35e-17;18!UBERON:0001986;7.35e-17;18!UBERON:0004852;7.35e-17;18!UBERON:0000487;8.63e-13;22!UBERON:0000178;1.19e-10;15!UBERON:0000179;1.19e-10;15!UBERON:0000463;1.19e-10;15!UBERON:0006914;1.27e-10;25!UBERON:0002193;5.14e-10;42!UBERON:0003915;8.22e-09;9!UBERON:0004700;8.22e-09;9!UBERON:0001917;8.22e-09;9!UBERON:0002390;9.88e-08;32!UBERON:0002465;5.39e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.07e-17,18;UBERON:0001986,5.07e-17,18;UBERON:0004852,5.07e-17,18;UBERON:0000487,6.47e-13,22;UBERON:0002193,3.58e-11,108;UBERON:0006914,9.93e-11,25;UBERON:0000178,1.23e-10,15;UBERON:0000179,1.23e-10,15;UBERON:0000463,1.23e-10,15;UBERON:0003915,6.88e-09,9;UBERON:0004700,6.88e-09,9;UBERON:0001917,6.88e-09,9;UBERON:0003081,3.26e-08,203;UBERON:0002390,1.23e-07,98;UBERON:0003061,1.23e-07,98;UBERON:0002465,5.46e-07,10;UBERON:0004535,5.78e-07,109|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,1.23852898652861,0,0,0,0.309868802321207,0,0.880801318004542,2.76997704265939,3.60980005446255,6.07630438004385,0.895661896959697,2.59114932815184,1.03030227053675,0.290796477559129,0,3.63876091781724,0.232429036905685,0,5.57471467611186,0.28769239232215,0.256160706529101,16.0807916324238,0,0.645484683583826,8.12558919566051,0,0,4.94391665779186,0,0.641858054152187,5.11469700639233,0,0.997318288108159,5.54092175692502,0.290209238628584,0,8.71951148593805,0,0,14.5516525952428,1.21079900526674,0.368277635987565,24.0511414455072,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0.569212969109448,4.69789751496751,1.91136614062614,0,0.560508562981536,0.263384084775077,56.4557040226701,33.7989255964282,39.8866908059048,66.3730386700992,85.7175561246343,80.0126791691699,46.7584148178987,43.4500781852177,97.5145553741711,105.450133821804,103.176272094471,41.8858615502958,42.3993473045203,11.0173396084463,4.69795030235942,20.5760190871887,54.7177418068003,65.5475028819797,25.0885257131944,21.41546576984,41.7710338026094,51.8877442678771,45.290524871491,19.4324902737699,16.2770863464105,13.3063286222772,24.8448946478325,26.7492017312734,9.99445812418767,21.3099526839615,12.3169199538157,15.1205057418549,5.34880391567015,17.0892796581703,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.523916301990851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6083,0,0.170426809518315,0.423387050190929,0.9164274741762,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0.848915739187391,1.31135736302374,0.470317296361523,0.245148321753905,0,0.196308467114945,0,1.2679671827502,0,5.54505116081136,7.73494655682926,0,0,0,0,0.730336388246517,3.21110498383179,0.143339583151451,0,0.0679914901909147,0,4.2322147241232,0,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0,0,0.20686599172379,1.91910583710883,0.714193294391221,3.74615677048835,6.51784500106508,0,0.190941474834495,3.03175783437329,0.435433495793923,0.342233301085281,10.3048641112319,0.78894425931944,0.99798106963804,0.407016343054873,0,1.9307228228694,0,0,1.71138021856013,1.62758471326295,0.665756774185513,4.22674966541155,0|short_description=p2@TBC1D4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-495bp_to_ENST00000488955_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_2_at_TBC1D4_5end | |||
|id=chr13:75900881..75900923,- | |||
|ontology_enrichment_celltype=CL:0002139!6.11e-15!24;CL:0000115!1.05e-14!35;CL:0000791!2.98e-13!18;CL:0000789!2.98e-13!18;CL:0002420!2.98e-13!18;CL:0002419!2.98e-13!18;CL:0000790!2.98e-13!18;CL:0002078!4.45e-12!44;CL:0000738!4.68e-12!140;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000838!1.79e-11!52;CL:0000071!2.61e-11!18;CL:0002546!2.61e-11!18;CL:0000542!5.62e-11!53;CL:0000051!5.62e-11!53;CL:0000213!6.94e-11!57;CL:0000215!6.94e-11!57;CL:0002087!1.28e-10!119;CL:0000625!1.28e-09!11;CL:0000037!1.83e-09!172;CL:0000566!1.83e-09!172;CL:0002031!2.92e-09!124;CL:0000988!2.78e-08!182;CL:0002032!4.43e-08!165;CL:0000837!4.43e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.28e-22;24!CL:0000791;1.31e-20;18!CL:0000789;1.31e-20;18!CL:0002419;1.31e-20;18!CL:0000115;1.36e-19;36!CL:0000071;7.35e-17;18!CL:0000084;1.86e-16;25!CL:0000625;2.33e-14;11!CL:0002078;1.22e-12;45!CL:0000213;9.87e-10;58!CL:0000215;9.87e-10;58!CL:0000624;1.75e-09;6!CL:1000413;8.22e-09;9!CL:0002138;2.50e-07;6!CL:0002544;8.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.15e-23,36;CL:0002139,8.65e-23,24;CL:0000791,1.38e-20,18;CL:0000789,1.38e-20,18;CL:0002420,1.38e-20,18;CL:0002419,1.38e-20,18;CL:0000790,1.38e-20,18;CL:0002078,4.32e-18,45;CL:0000071,5.07e-17,18;CL:0002546,5.07e-17,18;CL:0000084,2.13e-16,25;CL:0000827,2.13e-16,25;CL:0000213,1.02e-15,58;CL:0000215,1.02e-15,58;CL:0000625,2.43e-14,11;CL:0000738,3.66e-14,136;CL:0000838,2.32e-12,52;CL:0002087,4.51e-12,115;CL:0000542,5.85e-12,53;CL:0000051,5.85e-12,53;CL:0002031,4.19e-10,120;CL:0000037,1.51e-09,168;CL:0000624,1.77e-09,6;CL:1000413,6.88e-09,9;CL:0002032,9.90e-09,161;CL:0000837,9.90e-09,161;CL:0000988,2.70e-08,177;CL:0005020,2.47e-07,6;CL:0002138,2.47e-07,6;CL:0005022,2.47e-07,6;CL:0002544,7.10e-07,6;CL:0002543,8.60e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-20;18!CL:0002546;7.35e-17;18!CL:0005022;2.50e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.61e-11!18;UBERON:0004638!2.61e-11!18;UBERON:0004852!2.61e-11!18;UBERON:0007023!6.83e-08!115;UBERON:0000487!6.91e-08!22;UBERON:0002193!2.44e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.35e-17;18!UBERON:0001986;7.35e-17;18!UBERON:0004852;7.35e-17;18!UBERON:0000487;8.63e-13;22!UBERON:0000178;1.19e-10;15!UBERON:0000179;1.19e-10;15!UBERON:0000463;1.19e-10;15!UBERON:0006914;1.27e-10;25!UBERON:0002193;5.14e-10;42!UBERON:0003915;8.22e-09;9!UBERON:0004700;8.22e-09;9!UBERON:0001917;8.22e-09;9!UBERON:0002390;9.88e-08;32!UBERON:0002465;5.39e-07;10 | |||
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| |||
|short_description=p2@TBC1D4 | |||
}} |
Revision as of 02:46, 11 September 2013
Short description: | p2@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TBC1D4_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -495bp_to_ENST00000488955_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.07e-17 | 18 |
endothelium | 5.07e-17 | 18 |
cardiovascular system endothelium | 5.07e-17 | 18 |
simple squamous epithelium | 6.47e-13 | 22 |
hemolymphoid system | 3.58e-11 | 108 |
squamous epithelium | 9.93e-11 | 25 |
blood | 1.23e-10 | 15 |
haemolymphatic fluid | 1.23e-10 | 15 |
organism substance | 1.23e-10 | 15 |
endothelial tube | 6.88e-09 | 9 |
arterial system endothelium | 6.88e-09 | 9 |
endothelium of artery | 6.88e-09 | 9 |
lateral plate mesoderm | 3.26e-08 | 203 |
hematopoietic system | 1.23e-07 | 98 |
blood island | 1.23e-07 | 98 |
lymphoid system | 5.46e-07 | 10 |
cardiovascular system | 5.78e-07 | 109 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.