FFCP PHASE1:Hg19::chr13:37633583..37633603,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55578|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20596|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000490716_5end|description=CAGE_peak_3_at_FAM48A_5end|id=chr13:37633583..37633603,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;7.82e-17;5!CL:0000163;8.64e-10;9|ontology_enrichment_celltype_v019_2=CL:0000097,8.14e-17,5;CL:0002028,8.14e-17,5;CL:0000163,8.84e-10,9|ontology_enrichment_development_v019=UBERON:0005425;2.54e-21;1!UBERON:0009117;5.04e-09;10!UBERON:0005564;5.04e-09;10!UBERON:0003056;5.36e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.20e-08!69;UBERON:0006238!1.20e-08!69;UBERON:0001017!1.38e-08!82;UBERON:0001049!1.54e-08!57;UBERON:0005068!1.54e-08!57;UBERON:0006241!1.54e-08!57;UBERON:0007135!1.54e-08!57;UBERON:0000073!1.69e-08!94;UBERON:0001016!1.69e-08!94;UBERON:0005743!2.85e-08!86;UBERON:0007023!2.99e-08!115;UBERON:0002616!3.66e-07!59|ontology_enrichment_uberon_v019=UBERON:0001905;5.48e-40;2!UBERON:0002757;5.48e-40;2!UBERON:0010134;5.48e-40;2!UBERON:0005408;5.48e-40;2!UBERON:0001899;5.48e-40;2!UBERON:0000941;2.54e-21;1!UBERON:0001785;2.54e-21;1!UBERON:0002464;2.54e-21;1!UBERON:0004904;2.54e-21;1!UBERON:0001021;2.54e-21;1!UBERON:0003296;1.41e-20;4!UBERON:0010133;1.41e-20;4!UBERON:0002784;1.41e-20;4!UBERON:0001894;3.34e-12;7!UBERON:0003714;2.35e-11;2!UBERON:0005162;2.35e-11;2!UBERON:0000122;2.35e-11;2!UBERON:0000473;4.77e-11;8!UBERON:0003135;2.76e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.49e-40,2;UBERON:0002757,4.49e-40,2;UBERON:0010134,4.49e-40,2;UBERON:0005408,4.49e-40,2;UBERON:0001899,4.49e-40,2;UBERON:0000941,2.82e-21,1;UBERON:0001785,2.82e-21,1;UBERON:0002464,2.82e-21,1;UBERON:0004904,2.82e-21,1;UBERON:0001021,2.82e-21,1;UBERON:0003902,2.82e-21,1;UBERON:0005425,2.82e-21,1;UBERON:0003296,1.28e-20,4;UBERON:0010133,1.28e-20,4;UBERON:0002784,1.28e-20,4;UBERON:0001894,3.15e-12,7;UBERON:0006222,3.15e-12,7;UBERON:0003714,2.47e-11,2;UBERON:0005162,2.47e-11,2;UBERON:0000122,2.47e-11,2;UBERON:0000473,4.66e-11,8;UBERON:0003135,2.72e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.422510572623884,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0.829050053357545,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0,0.651083453856419,0,0.301150238155546,0.511946444617674,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,1.96468613246569,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.276149695926898,0,0,0.302256294682921,0,0,0.545492241181669,0,0,0.265059536642971,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0,2.95597942737566,0.44024217006613,1.03664057770386,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.20291037696270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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20596 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000490716_5end | |||
|description=CAGE_peak_3_at_FAM48A_5end | |||
|id=chr13:37633583..37633603,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.82e-17;5!CL:0000163;8.64e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.14e-17,5;CL:0002028,8.14e-17,5;CL:0000163,8.84e-10,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.54e-21;1!UBERON:0009117;5.04e-09;10!UBERON:0005564;5.04e-09;10!UBERON:0003056;5.36e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.20e-08!69;UBERON:0006238!1.20e-08!69;UBERON:0001017!1.38e-08!82;UBERON:0001049!1.54e-08!57;UBERON:0005068!1.54e-08!57;UBERON:0006241!1.54e-08!57;UBERON:0007135!1.54e-08!57;UBERON:0000073!1.69e-08!94;UBERON:0001016!1.69e-08!94;UBERON:0005743!2.85e-08!86;UBERON:0007023!2.99e-08!115;UBERON:0002616!3.66e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.48e-40;2!UBERON:0002757;5.48e-40;2!UBERON:0010134;5.48e-40;2!UBERON:0005408;5.48e-40;2!UBERON:0001899;5.48e-40;2!UBERON:0000941;2.54e-21;1!UBERON:0001785;2.54e-21;1!UBERON:0002464;2.54e-21;1!UBERON:0004904;2.54e-21;1!UBERON:0001021;2.54e-21;1!UBERON:0003296;1.41e-20;4!UBERON:0010133;1.41e-20;4!UBERON:0002784;1.41e-20;4!UBERON:0001894;3.34e-12;7!UBERON:0003714;2.35e-11;2!UBERON:0005162;2.35e-11;2!UBERON:0000122;2.35e-11;2!UBERON:0000473;4.77e-11;8!UBERON:0003135;2.76e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.49e-40,2;UBERON:0002757,4.49e-40,2;UBERON:0010134,4.49e-40,2;UBERON:0005408,4.49e-40,2;UBERON:0001899,4.49e-40,2;UBERON:0000941,2.82e-21,1;UBERON:0001785,2.82e-21,1;UBERON:0002464,2.82e-21,1;UBERON:0004904,2.82e-21,1;UBERON:0001021,2.82e-21,1;UBERON:0003902,2.82e-21,1;UBERON:0005425,2.82e-21,1;UBERON:0003296,1.28e-20,4;UBERON:0010133,1.28e-20,4;UBERON:0002784,1.28e-20,4;UBERON:0001894,3.15e-12,7;UBERON:0006222,3.15e-12,7;UBERON:0003714,2.47e-11,2;UBERON:0005162,2.47e-11,2;UBERON:0000122,2.47e-11,2;UBERON:0000473,4.66e-11,8;UBERON:0003135,2.72e-08,11 | |||
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| |||
|short_description=p3@FAM48A | |||
}} |
Revision as of 02:09, 11 September 2013
Short description: | p3@FAM48A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM48A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490716_5end |
EntrezGene: | FAM48A |
HGNC: | 20596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.14e-17 | 5 |
basophil mast progenitor cell | 8.14e-17 | 5 |
endocrine cell | 8.84e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.49e-40 | 2 |
regional part of epithalamus | 4.49e-40 | 2 |
secretory circumventricular organ | 4.49e-40 | 2 |
circumventricular organ | 4.49e-40 | 2 |
epithalamus | 4.49e-40 | 2 |
cranial nerve II | 2.82e-21 | 1 |
cranial nerve | 2.82e-21 | 1 |
nerve trunk | 2.82e-21 | 1 |
nerve connecting eye with brain | 2.82e-21 | 1 |
nerve | 2.82e-21 | 1 |
retinal neural layer | 2.82e-21 | 1 |
presumptive neural retina | 2.82e-21 | 1 |
gland of diencephalon | 1.28e-20 | 4 |
neuroendocrine gland | 1.28e-20 | 4 |
regional part of diencephalon | 1.28e-20 | 4 |
diencephalon | 3.15e-12 | 7 |
future diencephalon | 3.15e-12 | 7 |
neural tissue | 2.47e-11 | 2 |
multi cell component structure | 2.47e-11 | 2 |
neuron projection bundle | 2.47e-11 | 2 |
testis | 4.66e-11 | 8 |
male reproductive organ | 2.72e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.