FFCP PHASE1:Hg19::chr13:24190079..24190098,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C55|description=CAGE_peak_at_chr13:24190079..24190098,+|id=chr13:24190079..24190098,+|ontology_enrichment_celltype=CL:0000128!3.91e-15!7;CL:0000126!3.91e-15!7;CL:0000127!3.91e-15!7;CL:0002453!3.91e-15!7;CL:0000064!3.71e-14!3;CL:0005012!3.71e-14!3;CL:0000067!3.71e-14!3;CL:0002304!3.71e-14!3;CL:0002605!1.96e-13!3;CL:1000497!5.41e-08!18;CL:0002518!5.41e-08!18;CL:0000133!1.83e-07!59;CL:0000147!2.71e-07!14;CL:0000221!6.29e-07!71;CL:0002586!7.05e-07!3|ontology_enrichment_celltype_v019=CL:0000064;2.09e-40;3!CL:0000067;2.09e-40;3!CL:0005012;2.09e-40;3!CL:0002304;2.09e-40;3!CL:0002586;1.42e-18;3!CL:0000149;3.49e-14;4!CL:0000182;7.87e-11;12!CL:0000075;3.65e-08;27|ontology_enrichment_celltype_v019_2=CL:0000064,1.96e-40,3;CL:0000067,1.96e-40,3;CL:0005012,1.96e-40,3;CL:0002304,1.96e-40,3;CL:0002586,1.36e-18,3;CL:0000149,3.37e-14,4;CL:0000182,7.88e-11,12;CL:0000075,3.65e-08,27|ontology_enrichment_development_v019=UBERON:0004161;9.19e-12;11!UBERON:0009497;4.86e-10;13!UBERON:0003104;3.23e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!6.66e-19!11;UBERON:0000488!5.44e-18!4;UBERON:0001778!3.71e-14!3;UBERON:0001775!3.71e-14!3;UBERON:0000019!1.17e-13!19;UBERON:0000047!1.17e-13!19;UBERON:0004088!1.17e-13!19;UBERON:0003072!1.17e-13!19;UBERON:0003071!1.17e-13!19;UBERON:0004128!1.17e-13!19;UBERON:0000970!6.60e-13!20;UBERON:0002104!3.17e-12!21;UBERON:0001456!3.17e-12!21;UBERON:0002203!5.13e-12!6;UBERON:0001768!5.13e-12!6;UBERON:0003056!7.31e-12!61;UBERON:0000020!4.83e-11!23;UBERON:0005085!1.08e-10!29;UBERON:0001032!1.59e-10!24;UBERON:0004456!1.59e-10!24;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0000966!1.44e-08!5;UBERON:0005388!1.44e-08!5;UBERON:0001802!1.44e-08!5;UBERON:0002346!3.46e-08!90;UBERON:0001801!1.12e-07!14;UBERON:0000481!1.71e-07!347;UBERON:0000475!2.12e-07!365;UBERON:0000058!6.51e-07!26;UBERON:0001781!7.05e-07!3;UBERON:0001782!7.05e-07!3;UBERON:0005424!7.05e-07!3|ontology_enrichment_uberon_v019=UBERON:0007625;5.97e-43;11!UBERON:0001778;2.09e-40;3!UBERON:0001775;2.09e-40;3!UBERON:0000019;1.75e-33;19!UBERON:0000047;1.75e-33;19!UBERON:0004088;1.75e-33;19!UBERON:0010230;1.75e-33;19!UBERON:0000970;8.59e-32;20!UBERON:0000488;1.65e-30;4!UBERON:0002104;2.92e-30;21!UBERON:0001456;2.92e-30;21!UBERON:0000020;1.35e-27;23!UBERON:0001032;1.97e-26;24!UBERON:0004456;1.97e-26;24!UBERON:0000966;3.13e-24;5!UBERON:0005388;3.13e-24;5!UBERON:0001802;3.13e-24;5!UBERON:0002203;1.38e-20;6!UBERON:0001768;1.38e-20;6!UBERON:0002200;1.38e-20;6!UBERON:0001781;1.42e-18;3!UBERON:0001782;1.42e-18;3!UBERON:0001801;1.65e-15;14!UBERON:0010371;3.50e-15;31!UBERON:0006876;1.61e-11;11!UBERON:0001444;1.73e-09;48!UBERON:0000033;4.62e-09;50!UBERON:0007811;3.47e-07;52!UBERON:0002107;4.98e-07;19!UBERON:0006925;4.98e-07;19!UBERON:0000153;5.51e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.76e-43,11;UBERON:0001778,1.96e-40,3;UBERON:0001775,1.96e-40,3;UBERON:0000019,7.83e-32,20;UBERON:0000047,7.83e-32,20;UBERON:0010312,7.83e-32,20;UBERON:0004088,7.83e-32,20;UBERON:0010230,7.83e-32,20;UBERON:0003072,7.83e-32,20;UBERON:0004128,7.83e-32,20;UBERON:0003071,7.83e-32,20;UBERON:0000488,1.57e-30,4;UBERON:0000970,2.67e-30,21;UBERON:0002104,2.67e-30,21;UBERON:0001456,6.63e-29,22;UBERON:0000020,1.83e-26,24;UBERON:0001032,1.83e-26,24;UBERON:0004456,1.83e-26,24;UBERON:0002203,1.33e-20,6;UBERON:0001768,1.33e-20,6;UBERON:0002200,1.33e-20,6;UBERON:0005085,2.15e-20,31;UBERON:0000966,2.27e-20,6;UBERON:0005388,2.27e-20,6;UBERON:0001802,2.27e-20,6;UBERON:0001782,1.36e-18,3;UBERON:0005424,1.36e-18,3;UBERON:0001801,1.65e-15,14;UBERON:0001781,3.37e-14,4;UBERON:0003056,6.81e-13,61;UBERON:0001444,1.01e-12,49;UBERON:0006876,1.58e-11,11;UBERON:0000033,4.58e-11,56;UBERON:0000153,6.10e-10,62;UBERON:0007811,6.10e-10,62;UBERON:0003075,1.95e-09,82;UBERON:0007284,1.95e-09,82;UBERON:0002346,5.77e-09,86;UBERON:0010371,2.74e-07,104;UBERON:0001048,3.36e-07,160;UBERON:0002107,4.98e-07,19;UBERON:0006925,4.98e-07,19;UBERON:0008836,4.98e-07,19|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,1.43117993565528,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45790524626576,5.98669373148923,3.86473057049755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr13:24190079..24190098,+ | |||
|id=chr13:24190079..24190098,+ | |||
|ontology_enrichment_celltype=CL:0000128!3.91e-15!7;CL:0000126!3.91e-15!7;CL:0000127!3.91e-15!7;CL:0002453!3.91e-15!7;CL:0000064!3.71e-14!3;CL:0005012!3.71e-14!3;CL:0000067!3.71e-14!3;CL:0002304!3.71e-14!3;CL:0002605!1.96e-13!3;CL:1000497!5.41e-08!18;CL:0002518!5.41e-08!18;CL:0000133!1.83e-07!59;CL:0000147!2.71e-07!14;CL:0000221!6.29e-07!71;CL:0002586!7.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.09e-40;3!CL:0000067;2.09e-40;3!CL:0005012;2.09e-40;3!CL:0002304;2.09e-40;3!CL:0002586;1.42e-18;3!CL:0000149;3.49e-14;4!CL:0000182;7.87e-11;12!CL:0000075;3.65e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.96e-40,3;CL:0000067,1.96e-40,3;CL:0005012,1.96e-40,3;CL:0002304,1.96e-40,3;CL:0002586,1.36e-18,3;CL:0000149,3.37e-14,4;CL:0000182,7.88e-11,12;CL:0000075,3.65e-08,27 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.19e-12;11!UBERON:0009497;4.86e-10;13!UBERON:0003104;3.23e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!6.66e-19!11;UBERON:0000488!5.44e-18!4;UBERON:0001778!3.71e-14!3;UBERON:0001775!3.71e-14!3;UBERON:0000019!1.17e-13!19;UBERON:0000047!1.17e-13!19;UBERON:0004088!1.17e-13!19;UBERON:0003072!1.17e-13!19;UBERON:0003071!1.17e-13!19;UBERON:0004128!1.17e-13!19;UBERON:0000970!6.60e-13!20;UBERON:0002104!3.17e-12!21;UBERON:0001456!3.17e-12!21;UBERON:0002203!5.13e-12!6;UBERON:0001768!5.13e-12!6;UBERON:0003056!7.31e-12!61;UBERON:0000020!4.83e-11!23;UBERON:0005085!1.08e-10!29;UBERON:0001032!1.59e-10!24;UBERON:0004456!1.59e-10!24;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0000966!1.44e-08!5;UBERON:0005388!1.44e-08!5;UBERON:0001802!1.44e-08!5;UBERON:0002346!3.46e-08!90;UBERON:0001801!1.12e-07!14;UBERON:0000481!1.71e-07!347;UBERON:0000475!2.12e-07!365;UBERON:0000058!6.51e-07!26;UBERON:0001781!7.05e-07!3;UBERON:0001782!7.05e-07!3;UBERON:0005424!7.05e-07!3 | |||
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|short_description=p@chr13:24190079..24190098,+ | |||
}} |
Revision as of 01:47, 11 September 2013
Short description: | p@chr13:24190079..24190098, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:24190079..24190098, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.96e-40 | 3 |
ciliated epithelial cell | 1.96e-40 | 3 |
multi-ciliated epithelial cell | 1.96e-40 | 3 |
non-pigmented ciliary epithelial cell | 1.96e-40 | 3 |
retinal pigment epithelial cell | 1.36e-18 | 3 |
visual pigment cell | 3.37e-14 | 4 |
hepatocyte | 7.88e-11 | 12 |
columnar/cuboidal epithelial cell | 3.65e-08 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.