FFCP PHASE1:Hg19::chr12:96793799..96793810,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5128|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8750|TSSclassifier=S|UniProt=F5H6Z0|association_with_transcript=41bp_to_ENST00000542666_5end|description=CAGE_peak_10_at_CDK17_5end|id=chr12:96793799..96793810,-|ontology_enrichment_celltype=CL:0002139!2.44e-10!24;CL:0000071!2.37e-07!18;CL:0002546!2.37e-07!18|ontology_enrichment_celltype_v019=CL:0000623;3.78e-16;3!CL:0000094;1.29e-15;8!CL:0002618;3.15e-15;3!CL:0002139;3.77e-15;24!CL:0002543;3.36e-13;6!CL:0000081;2.74e-11;11!CL:0000771;3.07e-11;2!CL:0000071;1.91e-09;18!CL:0002144;5.61e-08;3!CL:0002138;7.48e-08;6!CL:0000775;1.06e-07;3!CL:0000115;5.11e-07;36|ontology_enrichment_celltype_v019_2=CL:0000623,1.97e-16,3;CL:0000825,1.97e-16,3;CL:0000094,8.74e-16,8;CL:0002618,1.48e-15,3;CL:0002139,2.04e-15,24;CL:0002543,1.67e-13,6;CL:0000081,2.08e-11,11;CL:0000771,3.51e-11,2;CL:0000115,9.40e-10,36;CL:0000071,1.41e-09,18;CL:0002546,1.41e-09,18;CL:0005020,5.18e-08,6;CL:0002138,5.18e-08,6;CL:0005022,5.18e-08,6;CL:0002144,6.03e-08,3;CL:0000775,8.17e-08,3;CL:0002078,1.70e-07,45|ontology_enrichment_development_v019=CL:0002546;1.91e-09;18!CL:0005022;7.48e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.70e-14!115;UBERON:0002619!6.81e-09!22;UBERON:0001950!9.05e-08!20;UBERON:0001049!1.57e-07!57;UBERON:0005068!1.57e-07!57;UBERON:0006241!1.57e-07!57;UBERON:0007135!1.57e-07!57;UBERON:0000956!2.19e-07!25;UBERON:0000203!2.19e-07!25;UBERON:0001986!2.37e-07!18;UBERON:0004638!2.37e-07!18;UBERON:0004852!2.37e-07!18;UBERON:0003080!3.17e-07!42;UBERON:0002780!9.90e-07!41;UBERON:0001890!9.90e-07!41;UBERON:0006240!9.90e-07!41|ontology_enrichment_uberon_v019=UBERON:0004638;1.91e-09;18!UBERON:0001986;1.91e-09;18!UBERON:0004852;1.91e-09;18!UBERON:0002066;2.46e-09;5!UBERON:0001638;7.76e-09;9!UBERON:0003920;7.76e-09;9!UBERON:0004582;7.76e-09;9!UBERON:0010523;5.61e-08;3!UBERON:0001915;5.61e-08;3!UBERON:0001982;5.61e-08;3!UBERON:0000487;1.29e-07;22!UBERON:0002106;1.99e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.41e-09,18;UBERON:0001986,1.41e-09,18;UBERON:0004852,1.41e-09,18;UBERON:0002066,1.58e-09,5;UBERON:0001638,4.92e-09,9;UBERON:0003920,4.92e-09,9;UBERON:0004582,4.92e-09,9;UBERON:0010523,6.03e-08,3;UBERON:0001915,6.03e-08,3;UBERON:0001982,6.03e-08,3;UBERON:0000487,1.01e-07,22;UBERON:0002106,1.75e-07,3;UBERON:0004854,1.75e-07,3;UBERON:0009034,1.75e-07,3;UBERON:0002095,1.75e-07,3;UBERON:0004782,1.75e-07,3;UBERON:0003281,1.75e-07,3;UBERON:0009664,1.75e-07,3;UBERON:0002296,1.75e-07,3;UBERON:0005602,1.75e-07,3;UBERON:0001179,1.75e-07,3;UBERON:0006293,1.75e-07,3|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0.786728553697808,1.53531759238885,0.464448369948228,0,0,0,0.619737604642413,0.284338464974843,0,1.10799081706375,0.401088894940283,0.868043482863407,0.447830948479849,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.464858073811369,1.23350366406548,0.309706370895104,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.918251677112708,0,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,1.14681968437569,1.32171328579026,0.560508562981536,0,0,0.393010762749165,0.822405995998037,0.167186495390678,0,0.946895611469467,0,0.222820913770347,0.883817722424512,0,0.812411591295047,0.25618263945135,0.130059347559878,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.752875595388864,0.255973222308837,0,0.710331756132051,0,1.00803371612366,1.60464117470104,0.724122019413995,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.443458794925128,0.175669571386252,0.261958150995425,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0.476981248610684,0,0,0.596287222100115,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0.626984899610432,0.775250277507987,1.77883131343355,1.67360306382335,2.01414658554573,0.760272105718513,2.4406205754817,0.367663080345869,0,1.96459402224975,1.34717623575702,1.35133776579987,1.53316637465883,0.949265659568129,0.549605231791222,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.600952235626387,0.113432183160021,0.717558542755448,0,0,0.600182192168805,0.10305252923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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5128 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8750 | |||
|TSSclassifier=S | |||
|UniProt=F5H6Z0 | |||
|association_with_transcript=41bp_to_ENST00000542666_5end | |||
|description=CAGE_peak_10_at_CDK17_5end | |||
|id=chr12:96793799..96793810,- | |||
|ontology_enrichment_celltype=CL:0002139!2.44e-10!24;CL:0000071!2.37e-07!18;CL:0002546!2.37e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.78e-16;3!CL:0000094;1.29e-15;8!CL:0002618;3.15e-15;3!CL:0002139;3.77e-15;24!CL:0002543;3.36e-13;6!CL:0000081;2.74e-11;11!CL:0000771;3.07e-11;2!CL:0000071;1.91e-09;18!CL:0002144;5.61e-08;3!CL:0002138;7.48e-08;6!CL:0000775;1.06e-07;3!CL:0000115;5.11e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.97e-16,3;CL:0000825,1.97e-16,3;CL:0000094,8.74e-16,8;CL:0002618,1.48e-15,3;CL:0002139,2.04e-15,24;CL:0002543,1.67e-13,6;CL:0000081,2.08e-11,11;CL:0000771,3.51e-11,2;CL:0000115,9.40e-10,36;CL:0000071,1.41e-09,18;CL:0002546,1.41e-09,18;CL:0005020,5.18e-08,6;CL:0002138,5.18e-08,6;CL:0005022,5.18e-08,6;CL:0002144,6.03e-08,3;CL:0000775,8.17e-08,3;CL:0002078,1.70e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.91e-09;18!CL:0005022;7.48e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.70e-14!115;UBERON:0002619!6.81e-09!22;UBERON:0001950!9.05e-08!20;UBERON:0001049!1.57e-07!57;UBERON:0005068!1.57e-07!57;UBERON:0006241!1.57e-07!57;UBERON:0007135!1.57e-07!57;UBERON:0000956!2.19e-07!25;UBERON:0000203!2.19e-07!25;UBERON:0001986!2.37e-07!18;UBERON:0004638!2.37e-07!18;UBERON:0004852!2.37e-07!18;UBERON:0003080!3.17e-07!42;UBERON:0002780!9.90e-07!41;UBERON:0001890!9.90e-07!41;UBERON:0006240!9.90e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.91e-09;18!UBERON:0001986;1.91e-09;18!UBERON:0004852;1.91e-09;18!UBERON:0002066;2.46e-09;5!UBERON:0001638;7.76e-09;9!UBERON:0003920;7.76e-09;9!UBERON:0004582;7.76e-09;9!UBERON:0010523;5.61e-08;3!UBERON:0001915;5.61e-08;3!UBERON:0001982;5.61e-08;3!UBERON:0000487;1.29e-07;22!UBERON:0002106;1.99e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.41e-09,18;UBERON:0001986,1.41e-09,18;UBERON:0004852,1.41e-09,18;UBERON:0002066,1.58e-09,5;UBERON:0001638,4.92e-09,9;UBERON:0003920,4.92e-09,9;UBERON:0004582,4.92e-09,9;UBERON:0010523,6.03e-08,3;UBERON:0001915,6.03e-08,3;UBERON:0001982,6.03e-08,3;UBERON:0000487,1.01e-07,22;UBERON:0002106,1.75e-07,3;UBERON:0004854,1.75e-07,3;UBERON:0009034,1.75e-07,3;UBERON:0002095,1.75e-07,3;UBERON:0004782,1.75e-07,3;UBERON:0003281,1.75e-07,3;UBERON:0009664,1.75e-07,3;UBERON:0002296,1.75e-07,3;UBERON:0005602,1.75e-07,3;UBERON:0001179,1.75e-07,3;UBERON:0006293,1.75e-07,3 | |||
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| |||
|short_description=p10@CDK17 | |||
}} |
Revision as of 01:09, 11 September 2013
Short description: | p10@CDK17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CDK17_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000542666_5end |
EntrezGene: | CDK17 |
HGNC: | 8750 |
UniProt: | F5H6Z0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.97e-16 | 3 |
pro-NK cell | 1.97e-16 | 3 |
granulocyte | 8.74e-16 | 8 |
endothelial cell of umbilical vein | 1.48e-15 | 3 |
endothelial cell of vascular tree | 2.04e-15 | 24 |
vein endothelial cell | 1.67e-13 | 6 |
blood cell | 2.08e-11 | 11 |
eosinophil | 3.51e-11 | 2 |
endothelial cell | 9.40e-10 | 36 |
blood vessel endothelial cell | 1.41e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.41e-09 | 18 |
lymphangioblast | 5.18e-08 | 6 |
endothelial cell of lymphatic vessel | 5.18e-08 | 6 |
vascular lymphangioblast | 5.18e-08 | 6 |
capillary endothelial cell | 6.03e-08 | 3 |
neutrophil | 8.17e-08 | 3 |
meso-epithelial cell | 1.70e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.41e-09 | 18 |
endothelium | 1.41e-09 | 18 |
cardiovascular system endothelium | 1.41e-09 | 18 |
umbilical vein | 1.58e-09 | 5 |
vein | 4.92e-09 | 9 |
venous blood vessel | 4.92e-09 | 9 |
venous system | 4.92e-09 | 9 |
microcirculatory vessel | 6.03e-08 | 3 |
endothelium of capillary | 6.03e-08 | 3 |
capillary | 6.03e-08 | 3 |
simple squamous epithelium | 1.01e-07 | 22 |
spleen | 1.75e-07 | 3 |
gastrointestinal system mesentery | 1.75e-07 | 3 |
stomach region | 1.75e-07 | 3 |
mesentery | 1.75e-07 | 3 |
gastrointestinal system serosa | 1.75e-07 | 3 |
mesentery of stomach | 1.75e-07 | 3 |
gut mesentery | 1.75e-07 | 3 |
dorsal mesentery | 1.75e-07 | 3 |
dorsal mesogastrium | 1.75e-07 | 3 |
peritoneal cavity | 1.75e-07 | 3 |
spleen primordium | 1.75e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.