FFCP PHASE1:Hg19::chr12:70636886..70636895,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4848|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7878|TSSclassifier=S|UniProt=B2RDX7,Q9NZN8|association_with_transcript=76bp_to_ENST00000418359,NM_001199302,uc009zro.2_5end|coexpression_cluster_id=C38|description=CAGE_peak_17_at_CNOT2_5end|id=chr12:70636886..70636895,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000771;3.81e-21;2!CL:0001014;5.69e-21;2!CL:0001016;5.69e-21;2!CL:0000453;3.22e-09;5!CL:0000138;5.54e-08;6!CL:0000840;6.78e-08;5!CL:0002548;6.78e-08;6|ontology_enrichment_celltype_v019_2=CL:0000771,3.81e-21,2;CL:0001014,4.66e-21,2;CL:0001016,4.66e-21,2;CL:0000453,2.97e-09,5;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6;CL:0000840,6.34e-08,5;CL:0001029,6.34e-08,5;CL:0002548,7.25e-08,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,3.87780264148325,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,5.82490436163902,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0.171594997861965,0.432164393964449,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0,0.157363764404994,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.697448552208751,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0.471353094203252,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p17@CNOT2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7878 | |||
|TSSclassifier=S | |||
|UniProt=B2RDX7,Q9NZN8 | |||
|association_with_transcript=76bp_to_ENST00000418359,NM_001199302,uc009zro.2_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_17_at_CNOT2_5end | |||
|id=chr12:70636886..70636895,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000771;3.81e-21;2!CL:0001014;5.69e-21;2!CL:0001016;5.69e-21;2!CL:0000453;3.22e-09;5!CL:0000138;5.54e-08;6!CL:0000840;6.78e-08;5!CL:0002548;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.81e-21,2;CL:0001014,4.66e-21,2;CL:0001016,4.66e-21,2;CL:0000453,2.97e-09,5;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6;CL:0000840,6.34e-08,5;CL:0001029,6.34e-08,5;CL:0002548,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,3.87780264148325,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,5.82490436163902,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0.171594997861965,0.432164393964449,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0,0.157363764404994,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.697448552208751,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0.471353094203252,0,0,0,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@CNOT2 | |||
}} |
Revision as of 00:17, 11 September 2013
Short description: | p17@CNOT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_CNOT2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 76bp_to_ENST00000418359, NM_001199302, uc009zro.2_5end |
EntrezGene: | CNOT2 |
HGNC: | 7878 |
UniProt: | B2RDX7Q9NZN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.81e-21 | 2 |
CD1a-positive Langerhans cell | 4.66e-21 | 2 |
immature CD1a-positive Langerhans cell | 4.66e-21 | 2 |
Langerhans cell | 2.97e-09 | 5 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
immature conventional dendritic cell | 6.34e-08 | 5 |
common dendritic progenitor | 6.34e-08 | 5 |
cardiac fibroblast | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.