FFCP PHASE1:Hg19::chr12:54652060..54652084,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23468|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1555|TSSclassifier=S|UniProt=F8VNY3|association_with_transcript=126bp_to_ENST00000552562_5end|coexpression_cluster_id=C165|description=CAGE_peak_16_at_CBX5_5end|id=chr12:54652060..54652084,-|ontology_enrichment_celltype=CL:0000055!2.56e-12!180;CL:0000153!5.58e-12!9;CL:0000447!5.58e-12!9;CL:0000327!2.12e-11!14;CL:0000499!2.84e-10!27;CL:0000667!7.33e-10!6;CL:0000058!7.33e-10!6;CL:0000138!7.33e-10!6;CL:0002620!5.82e-09!23;CL:0000057!9.70e-07!75|ontology_enrichment_celltype_v019=CL:0000138;4.74e-26;6!CL:0000153;1.81e-17;9!CL:0000447;1.81e-17;9!CL:0000327;6.16e-16;15!CL:1000306;2.60e-10;4!CL:0002547;2.60e-10;4!CL:0000151;9.29e-09;36!CL:0000499;1.77e-08;28|ontology_enrichment_celltype_v019_2=CL:0000058,4.05e-26,6;CL:0000138,4.05e-26,6;CL:0000153,1.63e-17,9;CL:0000447,1.63e-17,9;CL:0000327,6.17e-16,15;CL:1000306,2.99e-10,4;CL:0002547,2.99e-10,4;CL:0000151,3.75e-09,36;CL:0000499,1.77e-08,28|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.51e-07!5;DOID:450!1.51e-07!5;DOID:66!1.51e-07!5;DOID:423!1.51e-07!5;DOID:0080000!1.51e-07!5;DOID:11722!1.51e-07!5|ontology_enrichment_disease_v019=DOID:3350;2.87e-20;2!DOID:6193;2.53e-11;1!DOID:3371;1.05e-10;1!DOID:4549;1.05e-10;1!DOID:5861;1.05e-10;1!DOID:6496;1.05e-10;1!DOID:3571;1.05e-10;1!DOID:17;2.00e-08;5!DOID:450;2.00e-08;5!DOID:66;2.00e-08;5!DOID:423;2.00e-08;5!DOID:0080000;2.00e-08;5!DOID:11722;2.00e-08;5!DOID:201;3.68e-07;6!DOID:0060100;3.68e-07;6|ontology_enrichment_disease_v019_2=DOID:3350,3.67e-20,2;DOID:6193,2.53e-11,1;DOID:3371,6.77e-11,1;DOID:4549,6.77e-11,1;DOID:5861,6.77e-11,1;DOID:6496,6.77e-11,1;DOID:3571,1.33e-10,1;DOID:17,2.08e-08,5;DOID:450,2.08e-08,5;DOID:66,2.08e-08,5;DOID:423,2.08e-08,5;DOID:0080000,2.08e-08,5;DOID:11722,2.08e-08,5;DOID:201,3.25e-07,6;DOID:0060100,3.25e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004797;2.60e-10;4!UBERON:0000415;2.60e-10;4!UBERON:0007240;2.60e-10;4!UBERON:0005742;2.60e-10;4!UBERON:0005734;2.60e-10;4!UBERON:0004664;2.60e-10;4!UBERON:0004663;2.60e-10;4|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.99e-10,4;UBERON:0007240,2.99e-10,4;UBERON:0005742,2.99e-10,4;UBERON:0005734,2.99e-10,4;UBERON:0004664,2.99e-10,4;UBERON:0004663,2.99e-10,4|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.434539556882471,7.15757352345989,6.32625331393427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,0,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,1.07633781413317,0,0.423863802319124,1.20036438433761,0.824420233907511,0.257640540045629,0,0.168776332241266,0.779496041289589,0,0,0,0.355009592516614,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,2.65690239414175,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,1.10273068709225,0,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,16.166687052332,0,0,0,0,1.76512253383001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5768336777855,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.0620964029413835,2.21357815897969,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.686791410365586,1.34699795506368,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.537266523244462,0,0,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,2.55731135809876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0|short_description=p16@CBX5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1555 | |||
|TSSclassifier=S | |||
|UniProt=F8VNY3 | |||
|association_with_transcript=126bp_to_ENST00000552562_5end | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_16_at_CBX5_5end | |||
|id=chr12:54652060..54652084,- | |||
|ontology_enrichment_celltype=CL:0000055!2.56e-12!180;CL:0000153!5.58e-12!9;CL:0000447!5.58e-12!9;CL:0000327!2.12e-11!14;CL:0000499!2.84e-10!27;CL:0000667!7.33e-10!6;CL:0000058!7.33e-10!6;CL:0000138!7.33e-10!6;CL:0002620!5.82e-09!23;CL:0000057!9.70e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000138;4.74e-26;6!CL:0000153;1.81e-17;9!CL:0000447;1.81e-17;9!CL:0000327;6.16e-16;15!CL:1000306;2.60e-10;4!CL:0002547;2.60e-10;4!CL:0000151;9.29e-09;36!CL:0000499;1.77e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.05e-26,6;CL:0000138,4.05e-26,6;CL:0000153,1.63e-17,9;CL:0000447,1.63e-17,9;CL:0000327,6.17e-16,15;CL:1000306,2.99e-10,4;CL:0002547,2.99e-10,4;CL:0000151,3.75e-09,36;CL:0000499,1.77e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.51e-07!5;DOID:450!1.51e-07!5;DOID:66!1.51e-07!5;DOID:423!1.51e-07!5;DOID:0080000!1.51e-07!5;DOID:11722!1.51e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3350;2.87e-20;2!DOID:6193;2.53e-11;1!DOID:3371;1.05e-10;1!DOID:4549;1.05e-10;1!DOID:5861;1.05e-10;1!DOID:6496;1.05e-10;1!DOID:3571;1.05e-10;1!DOID:17;2.00e-08;5!DOID:450;2.00e-08;5!DOID:66;2.00e-08;5!DOID:423;2.00e-08;5!DOID:0080000;2.00e-08;5!DOID:11722;2.00e-08;5!DOID:201;3.68e-07;6!DOID:0060100;3.68e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,3.67e-20,2;DOID:6193,2.53e-11,1;DOID:3371,6.77e-11,1;DOID:4549,6.77e-11,1;DOID:5861,6.77e-11,1;DOID:6496,6.77e-11,1;DOID:3571,1.33e-10,1;DOID:17,2.08e-08,5;DOID:450,2.08e-08,5;DOID:66,2.08e-08,5;DOID:423,2.08e-08,5;DOID:0080000,2.08e-08,5;DOID:11722,2.08e-08,5;DOID:201,3.25e-07,6;DOID:0060100,3.25e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.60e-10;4!UBERON:0000415;2.60e-10;4!UBERON:0007240;2.60e-10;4!UBERON:0005742;2.60e-10;4!UBERON:0005734;2.60e-10;4!UBERON:0004664;2.60e-10;4!UBERON:0004663;2.60e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.99e-10,4;UBERON:0007240,2.99e-10,4;UBERON:0005742,2.99e-10,4;UBERON:0005734,2.99e-10,4;UBERON:0004664,2.99e-10,4;UBERON:0004663,2.99e-10,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,0.434539556882471,7.15757352345989,6.32625331393427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,0,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,1.07633781413317,0,0.423863802319124,1.20036438433761,0.824420233907511,0.257640540045629,0,0.168776332241266,0.779496041289589,0,0,0,0.355009592516614,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,2.65690239414175,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,1.10273068709225,0,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,16.166687052332,0,0,0,0,1.76512253383001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5768336777855,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.110929051536852,0.0620964029413835,2.21357815897969,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.686791410365586,1.34699795506368,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.537266523244462,0,0,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,2.55731135809876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p16@CBX5 | |||
}} |
Revision as of 23:21, 10 September 2013
Short description: | p16@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_CBX5_5end |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | 126bp_to_ENST00000552562_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | F8VNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.05e-26 | 6 |
chondrocyte | 4.05e-26 | 6 |
GAG secreting cell | 1.63e-17 | 9 |
carbohydrate secreting cell | 1.63e-17 | 9 |
extracellular matrix secreting cell | 6.17e-16 | 15 |
fibroblast of tunica adventitia of artery | 2.99e-10 | 4 |
fibroblast of the aortic adventitia | 2.99e-10 | 4 |
secretory cell | 3.75e-09 | 36 |
stromal cell | 1.77e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.99e-10 | 4 |
tunica adventitia of artery | 2.99e-10 | 4 |
adventitia | 2.99e-10 | 4 |
tunica adventitia of blood vessel | 2.99e-10 | 4 |
aorta tunica adventitia | 2.99e-10 | 4 |
aorta wall | 2.99e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.67e-20 | 2 |
epithelioid sarcoma | 2.53e-11 | 1 |
chondrosarcoma | 6.77e-11 | 1 |
extraosseous chondrosarcoma | 6.77e-11 | 1 |
myxoid chondrosarcoma | 6.77e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 6.77e-11 | 1 |
liver cancer | 1.33e-10 | 1 |
musculoskeletal system disease | 2.08e-08 | 5 |
myotonic disease | 2.08e-08 | 5 |
muscle tissue disease | 2.08e-08 | 5 |
myopathy | 2.08e-08 | 5 |
muscular disease | 2.08e-08 | 5 |
myotonic dystrophy | 2.08e-08 | 5 |
connective tissue cancer | 3.25e-07 | 6 |
musculoskeletal system cancer | 3.25e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.